Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8022G06.3
        

               Conread position:
               55-720
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               307
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               254, 286
               

               Conread position:
               121-710
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 20
               

               Conread position:
               125-527
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               285
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               18, 38
               

               Conread position:
               125-589
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               331
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               11, 7
               

               Conread position:
               125-680
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 269
               

               Conread position:
               125-707
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 58
               

               Conread position:
               125-709
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 125
               

               Conread position:
               125-720
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 274
               

               Conread position:
               126-720
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 86
               

               Conread position:
               135-706
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 229
               

               Conread position:
               136-697
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 252
               

               Conread position:
               138-719
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 255
               

               Conread position:
               156-407
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               45, 156
               

               Conread position:
               158-450
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               40, 121
               

               Conread position:
               158-566
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 124
               

               Conread position:
               158-646
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               335
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               59, 53
               

               Conread position:
               161-336
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               31, 73
               

               Conread position:
               164-418
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               37, 66
               

               Conread position:
               164-636
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 224
               

               Conread position:
               164-637
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               314
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               35, 85
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 104
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 176
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 98
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 22
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 176
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 65
               

               Conread position:
               164-707
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 120
               

               Conread position:
               164-707
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 224
               

               Conread position:
               164-716
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 230
               

               Conread position:
               164-716
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 55
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 224
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 225
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 225
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 225
               

               Conread position:
               166-697
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 161
               

               Conread position:
               168-720
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               374
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               24, 194
               

               Conread position:
               171-457
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               171-699
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               356
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               63, 14
               

               Conread position:
               171-720
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 49
               

               Conread position:
               172-720
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 42
               

               Conread position:
               180-566
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 171
               

               Conread position:
               181-697
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 211
               

               Conread position:
               188-644
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               308
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               26, 149
               

               Conread position:
               189-729
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 161
               

               Conread position:
               196-488
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               113, 190
               

               Conread position:
               196-500
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               55, 70
               

               Conread position:
               196-707
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 63
               

               Conread position:
               196-710
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 146
               

               Conread position:
               196-720
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               352
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               21, 15
               

               Conread position:
               199-636
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 144
               

               Conread position:
               203-707
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 111
               

               Conread position:
               205-510
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               107, 10
               

               Conread position:
               207-646
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 155
               

               Conread position:
               211-710
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 68
               

               Conread position:
               216-710
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               330
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               73, 179
               

               Conread position:
               219-710
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               339
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               105, 170
               

               Conread position:
               232-614
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               16, 25
               

               Conread position:
               234-635
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 25
               

               Conread position:
               239-721
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               323
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               70, 147
               

               Conread position:
               244-449
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               65, 114
               

               Conread position:
               252-720
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               310
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               57, 94
               

               Conread position:
               268-609
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               23, 119
               

               Conread position:
               269-597
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               40, 8
               

               Conread position:
               272-720
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 89
               

               Conread position:
               278-598
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 114
               

               Conread position:
               280-691
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 39
               

               Conread position:
               283-646
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 15
               

               Conread position:
               309-716
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 53
               

               Conread position:
               313-611
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               82, 67
               

               Conread position:
               314-716
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               260
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               82, 69
               

               Conread position:
               319-707
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               267
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               77, 11
               

               Conread position:
               320-712
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               76, 68
               

               Conread position:
               322-538
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               74, 22
               

               Conread position:
               322-664
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               76, 60
               

               Conread position:
               324-721
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               72, 53
               

               Conread position:
               327-710
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               274
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               69, 61
               

               Conread position:
               343-720
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               274
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               53, 200
               

               Conread position:
               345-640
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               50, 44
               

               Conread position:
               346-548
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               49, 43
               

               Conread position:
               368-697
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               30, 20
               

               Conread position:
               376-720
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               20, 12
               

               Conread position:
               378-539
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 6
               

               Conread position:
               397-692
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 64
               

               Conread position:
               403-639
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               18, 53
               

               Conread position:
               403-716
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               15, 59
               

               Conread position:
               417-720
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               89, 43
               

               Conread position:
               417-722
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               45, 136
               

               Conread position:
               421-697
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               89, 39
               

               Conread position:
               421-720
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               80, 27
               

               Conread position:
               427-564
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               128, 33
               

               Conread position:
               437-645
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               95, 23
               

               Conread position:
               442-624
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               127, 18
               

               Conread position:
               459-697
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               486-720
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               80, 15
               
Show alignments to all cow chromosomes.