Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8022G06.3
        

               Conread position:
               123-570
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 31
               

               Conread position:
               125-569
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 269
               

               Conread position:
               125-697
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 148
               

               Conread position:
               125-697
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 162
               

               Conread position:
               125-716
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 38
               

               Conread position:
               125-716
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 269
               

               Conread position:
               125-720
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 139
               

               Conread position:
               125-720
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 38
               

               Conread position:
               125-720
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 94
               

               Conread position:
               125-720
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 271
               

               Conread position:
               126-431
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               226
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               24, 17
               

               Conread position:
               127-720
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 267
               

               Conread position:
               128-716
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 280
               

               Conread position:
               135-720
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               135-720
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               392
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               135-721
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               135-721
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               138-716
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 257
               

               Conread position:
               138-720
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 24
               

               Conread position:
               158-332
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 60
               

               Conread position:
               158-502
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               80, 71
               

               Conread position:
               158-503
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               43, 56
               

               Conread position:
               158-589
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 133
               

               Conread position:
               158-646
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 80
               

               Conread position:
               158-720
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 106
               

               Conread position:
               158-720
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 231
               

               Conread position:
               158-720
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 175
               

               Conread position:
               161-712
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 37
               

               Conread position:
               164-504
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 180
               

               Conread position:
               164-691
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 71
               

               Conread position:
               164-694
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 163
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 124
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 225
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 62
               

               Conread position:
               164-715
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               374
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               145, 45
               

               Conread position:
               164-716
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 71
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 67
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 104
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 225
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 118
               

               Conread position:
               171-711
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 103
               

               Conread position:
               171-717
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 110
               

               Conread position:
               171-720
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               370
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               171-720
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 184
               

               Conread position:
               178-528
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               22, 83
               

               Conread position:
               178-584
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               284
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               35, 97
               

               Conread position:
               178-707
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 188
               

               Conread position:
               181-506
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               20, 162
               

               Conread position:
               181-719
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 49
               

               Conread position:
               181-719
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               362
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               17, 224
               

               Conread position:
               181-720
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 53
               

               Conread position:
               181-720
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 180
               

               Conread position:
               195-707
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 14
               

               Conread position:
               195-728
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               354
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               43, 21
               

               Conread position:
               196-504
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               226
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               21, 15
               

               Conread position:
               196-697
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 195
               

               Conread position:
               196-710
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 119
               

               Conread position:
               196-720
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 190
               

               Conread position:
               196-720
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 190
               

               Conread position:
               198-699
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               336
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               197, 79
               

               Conread position:
               199-538
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               22, 179
               

               Conread position:
               199-720
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 12
               

               Conread position:
               224-719
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               336
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               85, 167
               

               Conread position:
               232-530
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               6, 33
               

               Conread position:
               236-718
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 44
               

               Conread position:
               239-720
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 89
               

               Conread position:
               241-711
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 54
               

               Conread position:
               244-543
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               65, 141
               

               Conread position:
               246-645
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 35
               

               Conread position:
               253-728
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               319
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               44, 61
               

               Conread position:
               259-702
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 6
               

               Conread position:
               265-560
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 70
               

               Conread position:
               267-646
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               269
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               45, 197
               

               Conread position:
               284-644
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 74
               

               Conread position:
               292-721
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               295
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               17, 94
               

               Conread position:
               311-646
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               85, 73
               

               Conread position:
               311-728
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               277
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               91, 72
               

               Conread position:
               317-710
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               90, 18
               

               Conread position:
               319-712
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               265
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               77, 63
               

               Conread position:
               320-513
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               78, 7
               

               Conread position:
               328-716
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 56
               

               Conread position:
               331-621
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               65, 53
               

               Conread position:
               343-610
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               53, 7
               

               Conread position:
               343-687
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               246
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               55, 45
               

               Conread position:
               343-703
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               52, 41
               

               Conread position:
               344-646
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               18, 39
               

               Conread position:
               344-668
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               76, 45
               

               Conread position:
               345-613
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               57, 38
               

               Conread position:
               345-694
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 43
               

               Conread position:
               345-715
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               255
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               51, 37
               

               Conread position:
               348-644
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 40
               

               Conread position:
               351-569
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               45, 37
               

               Conread position:
               351-716
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               262
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               45, 37
               

               Conread position:
               351-716
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               259
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               45, 37
               

               Conread position:
               351-720
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               256
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               45, 28
               

               Conread position:
               357-632
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               63, 91
               

               Conread position:
               360-720
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               381-711
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               43, 19
               

               Conread position:
               397-644
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               29, 67
               

               Conread position:
               401-710
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               19, 61
               

               Conread position:
               406-719
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               231
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               18, 57
               

               Conread position:
               410-710
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               14, 55
               

               Conread position:
               420-720
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               77, 40
               

               Conread position:
               444-710
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               85, 16
               

               Conread position:
               448-707
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               118, 12
               

               Conread position:
               469-712
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               166, 20
               

               Conread position:
               473-707
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               96, 50
               

               Conread position:
               481-693
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               90, 114
               

               Conread position:
               518-646
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               53, 0
               
Show alignments to all cow chromosomes.