Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8022G06.3 |
| Conread position: | 107-718 |
| Cow position: | chr5:53006092-53006697 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 29 |
| Conread position: | 123-721 |
| Cow position: | chr5:51770471-51769876 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 18 |
| Conread position: | 125-523 |
| Cow position: | chr5:14784899-14784499 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 165 |
| Conread position: | 125-697 |
| Cow position: | chr5:57482076-57481482 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 274 |
| Conread position: | 125-716 |
| Cow position: | chr5:4018737-4018119 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 391 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 125-719 |
| Cow position: | chr5:48808276-48807661 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 269 |
| Conread position: | 125-720 |
| Cow position: | chr5:6588558-6587942 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 392 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 42, 37 |
| Conread position: | 125-720 |
| Cow position: | chr5:64781552-64780937 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 273 |
| Conread position: | 125-722 |
| Cow position: | chr5:33187233-33187810 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 233 |
| Conread position: | 135-716 |
| Cow position: | chr5:3964921-3965521 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 135-716 |
| Cow position: | chr5:10775795-10775190 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 135-720 |
| Cow position: | chr5:26078724-26078114 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 135-720 |
| Cow position: | chr5:35300571-35301177 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 135-720 |
| Cow position: | chr5:42505476-42506083 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 135-720 |
| Cow position: | chr5:47830599-47829999 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 84 |
| Conread position: | 155-714 |
| Cow position: | chr5:41929717-41929175 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 88 |
| Conread position: | 158-431 |
| Cow position: | chr5:51335760-51335480 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 36, 230 |
| Conread position: | 158-507 |
| Cow position: | chr5:43003592-43003937 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 251 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 33, 91 |
| Conread position: | 158-548 |
| Cow position: | chr5:32308891-32308496 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 138 |
| Conread position: | 158-591 |
| Cow position: | chr5:54861548-54861134 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 82 |
| Conread position: | 158-646 |
| Cow position: | chr5:28241555-28242048 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 23 |
| Conread position: | 158-646 |
| Cow position: | chr5:35526307-35526809 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 71 |
| Conread position: | 158-716 |
| Cow position: | chr5:34902694-34903260 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 158-720 |
| Cow position: | chr5:28950365-28949803 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 239 |
| Conread position: | 159-541 |
| Cow position: | chr5:49130053-49130435 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 50, 73 |
| Conread position: | 161-553 |
| Cow position: | chr5:59639285-59639677 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 40, 186 |
| Conread position: | 161-569 |
| Cow position: | chr5:673134-673542 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 273 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 41, 94 |
| Conread position: | 161-716 |
| Cow position: | chr5:32363484-32364025 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 92 |
| Conread position: | 161-720 |
| Cow position: | chr5:52613442-52612879 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 101 |
| Conread position: | 162-720 |
| Cow position: | chr5:18121972-18121404 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 51 |
| Conread position: | 163-696 |
| Cow position: | chr5:6154394-6153847 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 226 |
| Conread position: | 163-710 |
| Cow position: | chr5:47894032-47893475 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 23 |
| Conread position: | 164-444 |
| Cow position: | chr5:48467774-48467486 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 49, 225 |
| Conread position: | 164-499 |
| Cow position: | chr5:49591588-49591251 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 22 |
| Conread position: | 164-554 |
| Cow position: | chr5:29766395-29766785 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 271 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 37, 50 |
| Conread position: | 164-646 |
| Cow position: | chr5:4069727-4070208 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 208 |
| Conread position: | 164-697 |
| Cow position: | chr5:1341525-1340974 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 230 |
| Conread position: | 164-697 |
| Cow position: | chr5:3503609-3503052 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 118 |
| Conread position: | 164-697 |
| Cow position: | chr5:10919332-10919877 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 226 |
| Conread position: | 164-697 |
| Cow position: | chr5:73489051-73488503 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 226 |
| Conread position: | 164-698 |
| Cow position: | chr5:4385750-4386298 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 24 |
| Conread position: | 164-704 |
| Cow position: | chr5:46738067-46737513 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 225 |
| Conread position: | 164-711 |
| Cow position: | chr5:41961217-41960670 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 197 |
| Conread position: | 164-716 |
| Cow position: | chr5:41956849-41956294 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 70 |
| Conread position: | 164-720 |
| Cow position: | chr5:2914956-2915528 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 197 |
| Conread position: | 164-720 |
| Cow position: | chr5:3786429-3787005 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 99 |
| Conread position: | 164-720 |
| Cow position: | chr5:24099179-24099744 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 120 |
| Conread position: | 164-720 |
| Cow position: | chr5:34697110-34697680 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 225 |
| Conread position: | 164-720 |
| Cow position: | chr5:37732858-37733427 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 117 |
| Conread position: | 164-720 |
| Cow position: | chr5:49519070-49519639 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 89 |
| Conread position: | 164-720 |
| Cow position: | chr5:54792130-54791554 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 185 |
| Conread position: | 164-720 |
| Cow position: | chr5:55628498-55629070 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 230 |
| Conread position: | 164-720 |
| Cow position: | chr5:58196530-58197094 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 70 |
| Conread position: | 171-377 |
| Cow position: | chr5:59144755-59144967 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 171-449 |
| Cow position: | chr5:44784400-44784115 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 171-471 |
| Cow position: | chr5:59061127-59061434 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 171-484 |
| Cow position: | chr5:241715-242028 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 46, 40 |
| Conread position: | 171-622 |
| Cow position: | chr5:44459996-44460458 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 171-639 |
| Cow position: | chr5:38073545-38074024 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 171-639 |
| Cow position: | chr5:45181631-45181152 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 171-720 |
| Cow position: | chr5:10842865-10842307 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 365 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 171-720 |
| Cow position: | chr5:18664305-18664862 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 171-720 |
| Cow position: | chr5:23959802-23959251 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 171-720 |
| Cow position: | chr5:27908759-27908190 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 110 |
| Conread position: | 171-720 |
| Cow position: | chr5:31707064-31707641 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 171-720 |
| Cow position: | chr5:32773288-32773843 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 218 |
| Conread position: | 171-720 |
| Cow position: | chr5:46807825-46808391 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 176-715 |
| Cow position: | chr5:46005334-46004781 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 38 |
| Conread position: | 178-629 |
| Cow position: | chr5:22115532-22115069 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 303 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 25, 103 |
| Conread position: | 178-645 |
| Cow position: | chr5:22992193-22992662 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 308 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 12, 40 |
| Conread position: | 179-640 |
| Cow position: | chr5:20428581-20429052 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 20, 38 |
| Conread position: | 181-442 |
| Cow position: | chr5:7274355-7274621 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 11, 180 |
| Conread position: | 181-488 |
| Cow position: | chr5:46645489-46645796 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 11, 86 |
| Conread position: | 181-697 |
| Cow position: | chr5:18401177-18400642 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 186 |
| Conread position: | 181-709 |
| Cow position: | chr5:30579853-30580407 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 211 |
| Conread position: | 181-710 |
| Cow position: | chr5:46629665-46629109 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 48 |
| Conread position: | 182-571 |
| Cow position: | chr5:62360950-62361341 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 15, 6 |
| Conread position: | 184-594 |
| Cow position: | chr5:74731356-74731766 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 262 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 33 |
| Conread position: | 184-715 |
| Cow position: | chr5:75624228-75624759 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 186-531 |
| Cow position: | chr5:62545359-62545699 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 27, 105 |
| Conread position: | 187-712 |
| Cow position: | chr5:12643193-12642672 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 9 |
| Conread position: | 195-471 |
| Cow position: | chr5:36444137-36443858 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 193 |
| Conread position: | 196-569 |
| Cow position: | chr5:39246270-39245894 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 95 |
| Conread position: | 196-635 |
| Cow position: | chr5:32947598-32948051 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 193 |
| Conread position: | 196-720 |
| Cow position: | chr5:4757622-4757098 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 15 |
| Conread position: | 196-720 |
| Cow position: | chr5:28012196-28012750 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 362 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 74, 30 |
| Conread position: | 196-720 |
| Cow position: | chr5:41528233-41527717 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 196-720 |
| Cow position: | chr5:45700856-45701392 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 182 |
| Conread position: | 199-583 |
| Cow position: | chr5:69384646-69385039 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 12, 18 |
| Conread position: | 199-636 |
| Cow position: | chr5:27002554-27002992 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 298 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 74, 169 |
| Conread position: | 216-497 |
| Cow position: | chr5:46776631-46776916 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 93, 170 |
| Conread position: | 230-587 |
| Cow position: | chr5:27056106-27055738 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 164 |
| Conread position: | 239-720 |
| Cow position: | chr5:1227267-1227756 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 334 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 120, 75 |
| Conread position: | 241-588 |
| Cow position: | chr5:53703572-53703226 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 241 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 155, 142 |
| Conread position: | 241-707 |
| Cow position: | chr5:14344818-14344368 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 67 |
| Conread position: | 251-617 |
| Cow position: | chr5:52434151-52434515 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 250 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 145, 110 |
| Conread position: | 259-697 |
| Cow position: | chr5:59282925-59283373 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 6 |
| Conread position: | 264-720 |
| Cow position: | chr5:46668567-46669021 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 49 |
| Conread position: | 273-719 |
| Cow position: | chr5:49073021-49072585 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 310 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 273-721 |
| Cow position: | chr5:23669500-23669050 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 290-715 |
| Cow position: | chr5:13046087-13046531 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 71 |
| Conread position: | 292-609 |
| Cow position: | chr5:48532666-48532985 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 17, 74 |
| Conread position: | 311-583 |
| Cow position: | chr5:41897782-41897508 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 105, 30 |
| Conread position: | 311-720 |
| Cow position: | chr5:307668-307248 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 72 |
| Conread position: | 313-687 |
| Cow position: | chr5:26778917-26779283 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 83, 60 |
| Conread position: | 313-710 |
| Cow position: | chr5:53625248-53624854 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 29 |
| Conread position: | 323-582 |
| Cow position: | chr5:18273413-18273677 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 73, 60 |
| Conread position: | 324-641 |
| Cow position: | chr5:9419398-9419078 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 34, 67 |
| Conread position: | 324-715 |
| Cow position: | chr5:41465746-41466155 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 284 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 74, 64 |
| Conread position: | 325-721 |
| Cow position: | chr5:31100749-31100349 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 271 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 71, 13 |
| Conread position: | 333-521 |
| Cow position: | chr5:26346304-26346491 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 63, 35 |
| Conread position: | 344-554 |
| Cow position: | chr5:47077368-47077569 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 52, 44 |
| Conread position: | 344-720 |
| Cow position: | chr5:40788758-40789147 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 40 |
| Conread position: | 347-541 |
| Cow position: | chr5:61277882-61277690 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 347-707 |
| Cow position: | chr5:10856120-10855750 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 41 |
| Conread position: | 351-720 |
| Cow position: | chr5:5103905-5104301 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 352-720 |
| Cow position: | chr5:18885825-18885455 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 36 |
| Conread position: | 362-634 |
| Cow position: | chr5:28333731-28333457 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 365-639 |
| Cow position: | chr5:26056770-26057032 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 370-645 |
| Cow position: | chr5:74502339-74502618 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 403-715 |
| Cow position: | chr5:39016788-39017111 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 18, 59 |
| Conread position: | 403-721 |
| Cow position: | chr5:24999234-24998909 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 19, 53 |
| Conread position: | 413-698 |
| Cow position: | chr5:27654579-27654869 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 167, 47 |
| Conread position: | 414-695 |
| Cow position: | chr5:69622375-69622661 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 95, 38 |
| Conread position: | 424-720 |
| Cow position: | chr5:7274625-7274922 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 428-710 |
| Cow position: | chr5:20311582-20311282 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 111, 32 |
| Conread position: | 431-710 |
| Cow position: | chr5:23687109-23686823 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 74, 28 |
| Conread position: | 436-647 |
| Cow position: | chr5:48831938-48832153 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 467-710 |
| Cow position: | chr5:48855032-48855281 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 49, 111 |
| Conread position: | 493-720 |
| Cow position: | chr5:58548854-58549074 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 5 |
Show alignments to all cow chromosomes.