Cow genome map

Conread name: Ss1.1-Pig4-TMW8022G06.3

Conread position: 107-718
Cow position:
Alignm length: 633
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 29

Conread position: 123-721
Cow position:
Alignm length: 616
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 18

Conread position: 125-523
Cow position:
Alignm length: 409
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 165

Conread position: 125-697
Cow position:
Alignm length: 597
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 274

Conread position: 125-716
Cow position:
Alignm length: 621
Alignm identity: 391
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 25, 18

Conread position: 125-719
Cow position:
Alignm length: 619
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 269

Conread position: 125-720
Cow position:
Alignm length: 626
Alignm identity: 392
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 42, 37

Conread position: 125-720
Cow position:
Alignm length: 621
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 273

Conread position: 125-722
Cow position:
Alignm length: 606
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 233

Conread position: 135-716
Cow position:
Alignm length: 608
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 135-716
Cow position:
Alignm length: 613
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 135-720
Cow position:
Alignm length: 620
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 135-720
Cow position:
Alignm length: 613
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 135-720
Cow position:
Alignm length: 615
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 135-720
Cow position:
Alignm length: 609
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 84

Conread position: 155-714
Cow position:
Alignm length: 576
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 88

Conread position: 158-431
Cow position:
Alignm length: 282
Alignm identity: 189
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 36, 230

Conread position: 158-507
Cow position:
Alignm length: 359
Alignm identity: 251
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 33, 91

Conread position: 158-548
Cow position:
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 138

Conread position: 158-591
Cow position:
Alignm length: 442
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 82

Conread position: 158-646
Cow position:
Alignm length: 501
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 23

Conread position: 158-646
Cow position:
Alignm length: 517
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 71

Conread position: 158-716
Cow position:
Alignm length: 579
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 70

Conread position: 158-720
Cow position:
Alignm length: 583
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 239

Conread position: 159-541
Cow position:
Alignm length: 397
Alignm identity: 270
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 50, 73

Conread position: 161-553
Cow position:
Alignm length: 398
Alignm identity: 256
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 40, 186

Conread position: 161-569
Cow position:
Alignm length: 418
Alignm identity: 273
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 41, 94

Conread position: 161-716
Cow position:
Alignm length: 568
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 92

Conread position: 161-720
Cow position:
Alignm length: 582
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 101

Conread position: 162-720
Cow position:
Alignm length: 578
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 51

Conread position: 163-696
Cow position:
Alignm length: 552
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 226

Conread position: 163-710
Cow position:
Alignm length: 571
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 23

Conread position: 164-444
Cow position:
Alignm length: 290
Alignm identity: 198
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 49, 225

Conread position: 164-499
Cow position:
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 22

Conread position: 164-554
Cow position:
Alignm length: 402
Alignm identity: 271
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 37, 50

Conread position: 164-646
Cow position:
Alignm length: 496
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 208

Conread position: 164-697
Cow position:
Alignm length: 556
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 230

Conread position: 164-697
Cow position:
Alignm length: 568
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 118

Conread position: 164-697
Cow position:
Alignm length: 553
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 226

Conread position: 164-697
Cow position:
Alignm length: 555
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 226

Conread position: 164-698
Cow position:
Alignm length: 558
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 24

Conread position: 164-704
Cow position:
Alignm length: 559
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 225

Conread position: 164-711
Cow position:
Alignm length: 564
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 197

Conread position: 164-716
Cow position:
Alignm length: 571
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 70

Conread position: 164-720
Cow position:
Alignm length: 579
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 197

Conread position: 164-720
Cow position:
Alignm length: 586
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 99

Conread position: 164-720
Cow position:
Alignm length: 575
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 120

Conread position: 164-720
Cow position:
Alignm length: 578
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 225

Conread position: 164-720
Cow position:
Alignm length: 581
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 117

Conread position: 164-720
Cow position:
Alignm length: 576
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 89

Conread position: 164-720
Cow position:
Alignm length: 586
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 185

Conread position: 164-720
Cow position:
Alignm length: 576
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 230

Conread position: 164-720
Cow position:
Alignm length: 576
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 70

Conread position: 171-377
Cow position:
Alignm length: 214
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 43

Conread position: 171-449
Cow position:
Alignm length: 289
Alignm identity: 199
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 30, 43

Conread position: 171-471
Cow position:
Alignm length: 311
Alignm identity: 217
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 30, 43

Conread position: 171-484
Cow position:
Alignm length: 321
Alignm identity: 225
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 46, 40

Conread position: 171-622
Cow position:
Alignm length: 468
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-639
Cow position:
Alignm length: 485
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-639
Cow position:
Alignm length: 485
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 568
Alignm identity: 365
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 573
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 569
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 578
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 110

Conread position: 171-720
Cow position:
Alignm length: 584
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 568
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 218

Conread position: 171-720
Cow position:
Alignm length: 573
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 176-715
Cow position:
Alignm length: 563
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 38

Conread position: 178-629
Cow position:
Alignm length: 475
Alignm identity: 303
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 25, 103

Conread position: 178-645
Cow position:
Alignm length: 484
Alignm identity: 308
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 40

Conread position: 179-640
Cow position:
Alignm length: 477
Alignm identity: 307
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 20, 38

Conread position: 181-442
Cow position:
Alignm length: 271
Alignm identity: 192
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 11, 180

Conread position: 181-488
Cow position:
Alignm length: 316
Alignm identity: 211
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 11, 86

Conread position: 181-697
Cow position:
Alignm length: 542
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 186

Conread position: 181-709
Cow position:
Alignm length: 558
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 211

Conread position: 181-710
Cow position:
Alignm length: 561
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 48

Conread position: 182-571
Cow position:
Alignm length: 398
Alignm identity: 255
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 15, 6

Conread position: 184-594
Cow position:
Alignm length: 420
Alignm identity: 262
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 27, 33

Conread position: 184-715
Cow position:
Alignm length: 552
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 35

Conread position: 186-531
Cow position:
Alignm length: 356
Alignm identity: 233
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 105

Conread position: 187-712
Cow position:
Alignm length: 544
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 9

Conread position: 195-471
Cow position:
Alignm length: 282
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 193

Conread position: 196-569
Cow position:
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 95

Conread position: 196-635
Cow position:
Alignm length: 457
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 193

Conread position: 196-720
Cow position:
Alignm length: 542
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 15

Conread position: 196-720
Cow position:
Alignm length: 563
Alignm identity: 362
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 74, 30

Conread position: 196-720
Cow position:
Alignm length: 543
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 27

Conread position: 196-720
Cow position:
Alignm length: 545
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 182

Conread position: 199-583
Cow position:
Alignm length: 400
Alignm identity: 258
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 18

Conread position: 199-636
Cow position:
Alignm length: 450
Alignm identity: 298
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 74, 169

Conread position: 216-497
Cow position:
Alignm length: 289
Alignm identity: 192
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 93, 170

Conread position: 230-587
Cow position:
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 164

Conread position: 239-720
Cow position:
Alignm length: 505
Alignm identity: 334
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 120, 75

Conread position: 241-588
Cow position:
Alignm length: 353
Alignm identity: 241
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 155, 142

Conread position: 241-707
Cow position:
Alignm length: 476
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 67

Conread position: 251-617
Cow position:
Alignm length: 372
Alignm identity: 250
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 145, 110

Conread position: 259-697
Cow position:
Alignm length: 452
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 6

Conread position: 264-720
Cow position:
Alignm length: 468
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 49

Conread position: 273-719
Cow position:
Alignm length: 457
Alignm identity: 310
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 16

Conread position: 273-721
Cow position:
Alignm length: 468
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 290-715
Cow position:
Alignm length: 452
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 71

Conread position: 292-609
Cow position:
Alignm length: 329
Alignm identity: 230
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 17, 74

Conread position: 311-583
Cow position:
Alignm length: 279
Alignm identity: 182
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 105, 30

Conread position: 311-720
Cow position:
Alignm length: 426
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 72

Conread position: 313-687
Cow position:
Alignm length: 380
Alignm identity: 242
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 83, 60

Conread position: 313-710
Cow position:
Alignm length: 409
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 29

Conread position: 323-582
Cow position:
Alignm length: 269
Alignm identity: 188
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 73, 60

Conread position: 324-641
Cow position:
Alignm length: 333
Alignm identity: 238
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 67

Conread position: 324-715
Cow position:
Alignm length: 415
Alignm identity: 284
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 74, 64

Conread position: 325-721
Cow position:
Alignm length: 410
Alignm identity: 271
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 71, 13

Conread position: 333-521
Cow position:
Alignm length: 192
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 35

Conread position: 344-554
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 44

Conread position: 344-720
Cow position:
Alignm length: 395
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 40

Conread position: 347-541
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 35

Conread position: 347-707
Cow position:
Alignm length: 373
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 41

Conread position: 351-720
Cow position:
Alignm length: 401
Alignm identity: 265
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 38

Conread position: 352-720
Cow position:
Alignm length: 380
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 36

Conread position: 362-634
Cow position:
Alignm length: 278
Alignm identity: 193
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 33, 20

Conread position: 365-639
Cow position:
Alignm length: 278
Alignm identity: 193
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 24

Conread position: 370-645
Cow position:
Alignm length: 284
Alignm identity: 186
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 19

Conread position: 403-715
Cow position:
Alignm length: 327
Alignm identity: 222
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 18, 59

Conread position: 403-721
Cow position:
Alignm length: 333
Alignm identity: 231
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 19, 53

Conread position: 413-698
Cow position:
Alignm length: 293
Alignm identity: 208
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 167, 47

Conread position: 414-695
Cow position:
Alignm length: 293
Alignm identity: 199
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 95, 38

Conread position: 424-720
Cow position:
Alignm length: 305
Alignm identity: 209
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 31

Conread position: 428-710
Cow position:
Alignm length: 303
Alignm identity: 216
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 111, 32

Conread position: 431-710
Cow position:
Alignm length: 293
Alignm identity: 199
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 74, 28

Conread position: 436-647
Cow position:
Alignm length: 217
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 25

Conread position: 467-710
Cow position:
Alignm length: 251
Alignm identity: 171
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 111

Conread position: 493-720
Cow position:
Alignm length: 231
Alignm identity: 163
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 5

Show alignments to all cow chromosomes.