Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8022G06.3 |
| Conread position: | 120-580 |
| Cow position: | chr6:6475269-6474792 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 99 |
| Conread position: | 124-632 |
| Cow position: | chr6:65941222-65940697 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 113 |
| Conread position: | 125-695 |
| Cow position: | chr6:27529401-27528803 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 345 |
| Conread position: | 128-720 |
| Cow position: | chr6:1411052-1410433 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 36 |
| Conread position: | 135-484 |
| Cow position: | chr6:7140848-7140489 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 135-506 |
| Cow position: | chr6:40252275-40252655 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 260 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 8, 258 |
| Conread position: | 135-646 |
| Cow position: | chr6:39438380-39438905 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 56 |
| Conread position: | 135-720 |
| Cow position: | chr6:13944521-13945128 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 135-720 |
| Cow position: | chr6:26670252-26669646 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 135-720 |
| Cow position: | chr6:65821360-65820754 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 84 |
| Conread position: | 138-496 |
| Cow position: | chr6:185851-185482 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 29, 24 |
| Conread position: | 146-640 |
| Cow position: | chr6:16621061-16621558 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 146 |
| Conread position: | 155-720 |
| Cow position: | chr6:1404948-1404367 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 344 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 154, 27 |
| Conread position: | 156-710 |
| Cow position: | chr6:28133580-28134120 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 37 |
| Conread position: | 157-588 |
| Cow position: | chr6:33899590-33899167 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 295 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 41, 60 |
| Conread position: | 158-528 |
| Cow position: | chr6:30479748-30480121 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 151, 13 |
| Conread position: | 158-609 |
| Cow position: | chr6:1099512-1099061 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 56 |
| Conread position: | 158-710 |
| Cow position: | chr6:7178628-7178080 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 380 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 43, 103 |
| Conread position: | 158-720 |
| Cow position: | chr6:8021538-8022105 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 378 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 35, 95 |
| Conread position: | 161-485 |
| Cow position: | chr6:27332402-27332724 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 146, 34 |
| Conread position: | 161-570 |
| Cow position: | chr6:11404179-11404583 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 34 |
| Conread position: | 161-615 |
| Cow position: | chr6:2953559-2953105 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 38, 95 |
| Conread position: | 163-646 |
| Cow position: | chr6:28088168-28087697 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 331 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 135, 32 |
| Conread position: | 164-364 |
| Cow position: | chr6:36526909-36527119 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 164-395 |
| Cow position: | chr6:38900520-38900290 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 144, 37 |
| Conread position: | 164-554 |
| Cow position: | chr6:11724459-11724070 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 164-569 |
| Cow position: | chr6:59918419-59918010 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 291 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 37, 61 |
| Conread position: | 164-635 |
| Cow position: | chr6:65881860-65882340 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 125 |
| Conread position: | 164-639 |
| Cow position: | chr6:44149908-44149424 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 227 |
| Conread position: | 164-681 |
| Cow position: | chr6:57792040-57791518 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 323 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 49, 270 |
| Conread position: | 164-695 |
| Cow position: | chr6:27471250-27471774 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 361 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 28, 118 |
| Conread position: | 164-695 |
| Cow position: | chr6:40866670-40866129 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 228 |
| Conread position: | 164-696 |
| Cow position: | chr6:17046708-17047249 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 12 |
| Conread position: | 164-697 |
| Cow position: | chr6:185135-184581 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 178 |
| Conread position: | 164-697 |
| Cow position: | chr6:914282-914830 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 92 |
| Conread position: | 164-697 |
| Cow position: | chr6:3888833-3888309 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 72 |
| Conread position: | 164-697 |
| Cow position: | chr6:15279159-15278619 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 53 |
| Conread position: | 164-697 |
| Cow position: | chr6:20560459-20559906 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 302 |
| Conread position: | 164-697 |
| Cow position: | chr6:25214871-25215401 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 117 |
| Conread position: | 164-697 |
| Cow position: | chr6:28105207-28104663 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 106 |
| Conread position: | 164-697 |
| Cow position: | chr6:28169551-28170098 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 225 |
| Conread position: | 164-697 |
| Cow position: | chr6:30274244-30273698 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 180 |
| Conread position: | 164-698 |
| Cow position: | chr6:6567236-6567784 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 226 |
| Conread position: | 164-702 |
| Cow position: | chr6:702849-703416 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 240 |
| Conread position: | 164-707 |
| Cow position: | chr6:3276727-3276164 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 224 |
| Conread position: | 164-707 |
| Cow position: | chr6:8202830-8203384 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 225 |
| Conread position: | 164-709 |
| Cow position: | chr6:39334222-39333659 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 225 |
| Conread position: | 164-720 |
| Cow position: | chr6:3487774-3487209 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 118 |
| Conread position: | 164-720 |
| Cow position: | chr6:15140534-15139956 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 308 |
| Conread position: | 164-720 |
| Cow position: | chr6:21973304-21973889 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 180 |
| Conread position: | 164-720 |
| Cow position: | chr6:35876065-35875493 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 78 |
| Conread position: | 164-720 |
| Cow position: | chr6:40553918-40553356 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 62 |
| Conread position: | 164-720 |
| Cow position: | chr6:43999709-44000280 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 50 |
| Conread position: | 164-720 |
| Cow position: | chr6:51730745-51731299 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 187 |
| Conread position: | 164-720 |
| Cow position: | chr6:66232461-66233027 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 226 |
| Conread position: | 166-697 |
| Cow position: | chr6:55542603-55542067 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 182 |
| Conread position: | 168-720 |
| Cow position: | chr6:15892851-15892300 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 361 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 43, 62 |
| Conread position: | 171-639 |
| Cow position: | chr6:44032447-44032921 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 111 |
| Conread position: | 171-697 |
| Cow position: | chr6:28490910-28490372 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 44 |
| Conread position: | 171-715 |
| Cow position: | chr6:12530144-12530675 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 59 |
| Conread position: | 171-716 |
| Cow position: | chr6:43618370-43618936 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 218 |
| Conread position: | 171-720 |
| Cow position: | chr6:2375353-2375906 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 171-720 |
| Cow position: | chr6:12665665-12665100 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 171-720 |
| Cow position: | chr6:13847681-13848239 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 48 |
| Conread position: | 171-720 |
| Cow position: | chr6:40275742-40276304 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 172-720 |
| Cow position: | chr6:5949118-5948564 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 64 |
| Conread position: | 177-639 |
| Cow position: | chr6:44905154-44905613 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 151 |
| Conread position: | 177-696 |
| Cow position: | chr6:19337077-19336546 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 75 |
| Conread position: | 179-394 |
| Cow position: | chr6:14389240-14389460 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 179-720 |
| Cow position: | chr6:27170240-27170798 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 32 |
| Conread position: | 181-543 |
| Cow position: | chr6:56043055-56042685 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 208 |
| Conread position: | 181-697 |
| Cow position: | chr6:8760635-8760098 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 217 |
| Conread position: | 181-697 |
| Cow position: | chr6:47042533-47042020 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 181-707 |
| Cow position: | chr6:52693681-52694228 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 160 |
| Conread position: | 181-720 |
| Cow position: | chr6:24239722-24240271 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 40 |
| Conread position: | 183-718 |
| Cow position: | chr6:58601150-58601704 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 184-607 |
| Cow position: | chr6:43793043-43792618 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 157 |
| Conread position: | 193-569 |
| Cow position: | chr6:31565473-31565099 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 252 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 71, 16 |
| Conread position: | 194-707 |
| Cow position: | chr6:34891444-34890916 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 197 |
| Conread position: | 196-381 |
| Cow position: | chr6:28275663-28275849 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 117, 63 |
| Conread position: | 196-416 |
| Cow position: | chr6:10609588-10609812 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 156, 191 |
| Conread position: | 196-457 |
| Cow position: | chr6:15021897-15022156 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 113, 93 |
| Conread position: | 196-697 |
| Cow position: | chr6:68027604-68028112 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 337 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 196-715 |
| Cow position: | chr6:330783-330252 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 22 |
| Conread position: | 196-720 |
| Cow position: | chr6:13104740-13105279 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 196-720 |
| Cow position: | chr6:13310670-13310138 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 196-720 |
| Cow position: | chr6:51086625-51087159 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 190 |
| Conread position: | 196-720 |
| Cow position: | chr6:58027357-58027893 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 146 |
| Conread position: | 196-725 |
| Cow position: | chr6:13316789-13316249 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 199-387 |
| Cow position: | chr6:29312211-29312402 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 199-720 |
| Cow position: | chr6:1821941-1821394 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 170 |
| Conread position: | 206-471 |
| Cow position: | chr6:64716680-64716947 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 107, 52 |
| Conread position: | 206-639 |
| Cow position: | chr6:3149956-3150396 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 295 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 11, 5 |
| Conread position: | 215-716 |
| Cow position: | chr6:4259044-4258544 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 57 |
| Conread position: | 216-720 |
| Cow position: | chr6:51715242-51715744 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 124 |
| Conread position: | 223-728 |
| Cow position: | chr6:10644453-10644964 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 93 |
| Conread position: | 226-665 |
| Cow position: | chr6:41190034-41190476 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 115 |
| Conread position: | 227-506 |
| Cow position: | chr6:6157269-6157536 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 169, 6 |
| Conread position: | 231-616 |
| Cow position: | chr6:33879655-33880030 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 22, 75 |
| Conread position: | 231-715 |
| Cow position: | chr6:15920578-15921069 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 317 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 48, 69 |
| Conread position: | 239-720 |
| Cow position: | chr6:58065459-58065956 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 57 |
| Conread position: | 253-712 |
| Cow position: | chr6:34443653-34444134 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 322 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 61, 132 |
| Conread position: | 254-668 |
| Cow position: | chr6:38271630-38272049 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 136 |
| Conread position: | 258-611 |
| Cow position: | chr6:46573862-46573502 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 250 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 51, 7 |
| Conread position: | 259-716 |
| Cow position: | chr6:17597572-17597092 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 318 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 50, 6 |
| Conread position: | 259-720 |
| Cow position: | chr6:54415122-54415592 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 325 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 29, 44 |
| Conread position: | 259-720 |
| Cow position: | chr6:65842371-65842832 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 6 |
| Conread position: | 268-721 |
| Cow position: | chr6:1382549-1382099 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 304 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 58, 45 |
| Conread position: | 268-725 |
| Cow position: | chr6:7834279-7834740 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 317 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 282-498 |
| Cow position: | chr6:25794045-25793825 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 29, 104 |
| Conread position: | 284-720 |
| Cow position: | chr6:39910104-39910553 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 107 |
| Conread position: | 311-640 |
| Cow position: | chr6:10059658-10059988 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 311-646 |
| Cow position: | chr6:18973608-18973277 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 50 |
| Conread position: | 311-710 |
| Cow position: | chr6:15926786-15926360 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 33, 75 |
| Conread position: | 312-707 |
| Cow position: | chr6:67210550-67210941 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 76, 84 |
| Conread position: | 314-569 |
| Cow position: | chr6:57408558-57408307 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 103, 68 |
| Conread position: | 318-697 |
| Cow position: | chr6:66193713-66193316 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 268 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 77, 70 |
| Conread position: | 319-544 |
| Cow position: | chr6:33991590-33991369 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 77, 36 |
| Conread position: | 319-648 |
| Cow position: | chr6:44550347-44550020 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 77, 35 |
| Conread position: | 319-720 |
| Cow position: | chr6:32416442-32416831 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 280 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 80, 26 |
| Conread position: | 320-728 |
| Cow position: | chr6:14762078-14761686 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 287 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 73, 42 |
| Conread position: | 327-720 |
| Cow position: | chr6:60931507-60931906 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 61 |
| Conread position: | 329-656 |
| Cow position: | chr6:32449089-32448763 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 67, 60 |
| Conread position: | 329-707 |
| Cow position: | chr6:40500085-40499701 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 69, 61 |
| Conread position: | 338-710 |
| Cow position: | chr6:17244573-17244203 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 58, 50 |
| Conread position: | 343-707 |
| Cow position: | chr6:65833662-65833288 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 53, 47 |
| Conread position: | 344-707 |
| Cow position: | chr6:64282227-64281858 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 254 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 52, 45 |
| Conread position: | 345-697 |
| Cow position: | chr6:36527135-36527498 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 23 |
| Conread position: | 349-720 |
| Cow position: | chr6:62095599-62095203 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 47, 41 |
| Conread position: | 351-720 |
| Cow position: | chr6:50646344-50645965 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 37 |
| Conread position: | 351-728 |
| Cow position: | chr6:11871805-11871416 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 45, 37 |
| Conread position: | 363-691 |
| Cow position: | chr6:31636562-31636229 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 33, 29 |
| Conread position: | 374-710 |
| Cow position: | chr6:66546357-66546697 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 45, 14 |
| Conread position: | 376-697 |
| Cow position: | chr6:1535712-1535379 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 383-720 |
| Cow position: | chr6:40326286-40326633 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 13, 80 |
| Conread position: | 391-588 |
| Cow position: | chr6:32073130-32072934 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 5, 42 |
| Conread position: | 397-720 |
| Cow position: | chr6:28275894-28276228 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 21, 65 |
| Conread position: | 402-646 |
| Cow position: | chr6:10632447-10632695 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 60 |
| Conread position: | 417-707 |
| Cow position: | chr6:50700-50399 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 37 |
| Conread position: | 420-720 |
| Cow position: | chr6:9264003-9264307 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 170, 40 |
| Conread position: | 420-720 |
| Cow position: | chr6:45586873-45587167 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 89, 15 |
| Conread position: | 421-720 |
| Cow position: | chr6:29312414-29312720 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 145, 42 |
| Conread position: | 437-719 |
| Cow position: | chr6:10250671-10250384 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 62, 23 |
| Conread position: | 445-697 |
| Cow position: | chr6:41228379-41228641 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 54, 15 |
| Conread position: | 447-721 |
| Cow position: | chr6:29279759-29280033 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 118, 14 |
| Conread position: | 474-722 |
| Cow position: | chr6:13872140-13872390 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 17 |
| Conread position: | 477-710 |
| Cow position: | chr6:27332963-27333206 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 93, 20 |
| Conread position: | 484-697 |
| Cow position: | chr6:34004311-34004096 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 78, 16 |
| Conread position: | 493-646 |
| Cow position: | chr6:17627794-17627636 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 515-697 |
| Cow position: | chr6:25792752-25792562 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
Show alignments to all cow chromosomes.