Cow genome map

Conread name: Ss1.1-Pig4-TMW8022G06.3

Conread position: 120-580
Cow position:
Alignm length: 481
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 99

Conread position: 124-632
Cow position:
Alignm length: 536
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 113

Conread position: 125-695
Cow position:
Alignm length: 600
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 345

Conread position: 128-720
Cow position:
Alignm length: 626
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 36

Conread position: 135-484
Cow position:
Alignm length: 365
Alignm identity: 247
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 8, 28

Conread position: 135-506
Cow position:
Alignm length: 385
Alignm identity: 260
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 8, 258

Conread position: 135-646
Cow position:
Alignm length: 530
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 56

Conread position: 135-720
Cow position:
Alignm length: 617
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 135-720
Cow position:
Alignm length: 615
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 135-720
Cow position:
Alignm length: 614
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 84

Conread position: 138-496
Cow position:
Alignm length: 373
Alignm identity: 251
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 29, 24

Conread position: 146-640
Cow position:
Alignm length: 510
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 146

Conread position: 155-720
Cow position:
Alignm length: 588
Alignm identity: 344
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 154, 27

Conread position: 156-710
Cow position:
Alignm length: 564
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 37

Conread position: 157-588
Cow position:
Alignm length: 442
Alignm identity: 295
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 41, 60

Conread position: 158-528
Cow position:
Alignm length: 379
Alignm identity: 258
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 151, 13

Conread position: 158-609
Cow position:
Alignm length: 462
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 56

Conread position: 158-710
Cow position:
Alignm length: 576
Alignm identity: 380
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 43, 103

Conread position: 158-720
Cow position:
Alignm length: 586
Alignm identity: 378
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 35, 95

Conread position: 161-485
Cow position:
Alignm length: 331
Alignm identity: 223
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 146, 34

Conread position: 161-570
Cow position:
Alignm length: 419
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 34

Conread position: 161-615
Cow position:
Alignm length: 464
Alignm identity: 288
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 95

Conread position: 163-646
Cow position:
Alignm length: 497
Alignm identity: 331
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 135, 32

Conread position: 164-364
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 164-395
Cow position:
Alignm length: 235
Alignm identity: 175
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 144, 37

Conread position: 164-554
Cow position:
Alignm length: 403
Alignm identity: 269
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 13, 23

Conread position: 164-569
Cow position:
Alignm length: 423
Alignm identity: 291
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 37, 61

Conread position: 164-635
Cow position:
Alignm length: 486
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 125

Conread position: 164-639
Cow position:
Alignm length: 489
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 227

Conread position: 164-681
Cow position:
Alignm length: 529
Alignm identity: 323
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 270

Conread position: 164-695
Cow position:
Alignm length: 551
Alignm identity: 361
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 28, 118

Conread position: 164-695
Cow position:
Alignm length: 549
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 228

Conread position: 164-696
Cow position:
Alignm length: 553
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 12

Conread position: 164-697
Cow position:
Alignm length: 561
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 178

Conread position: 164-697
Cow position:
Alignm length: 555
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 92

Conread position: 164-697
Cow position:
Alignm length: 548
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 72

Conread position: 164-697
Cow position:
Alignm length: 551
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 53

Conread position: 164-697
Cow position:
Alignm length: 556
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 302

Conread position: 164-697
Cow position:
Alignm length: 550
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 117

Conread position: 164-697
Cow position:
Alignm length: 553
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 106

Conread position: 164-697
Cow position:
Alignm length: 550
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 225

Conread position: 164-697
Cow position:
Alignm length: 554
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 180

Conread position: 164-698
Cow position:
Alignm length: 555
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 226

Conread position: 164-702
Cow position:
Alignm length: 574
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 240

Conread position: 164-707
Cow position:
Alignm length: 566
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 224

Conread position: 164-707
Cow position:
Alignm length: 560
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 225

Conread position: 164-709
Cow position:
Alignm length: 566
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 225

Conread position: 164-720
Cow position:
Alignm length: 579
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 118

Conread position: 164-720
Cow position:
Alignm length: 581
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 308

Conread position: 164-720
Cow position:
Alignm length: 592
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 180

Conread position: 164-720
Cow position:
Alignm length: 579
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 78

Conread position: 164-720
Cow position:
Alignm length: 576
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 62

Conread position: 164-720
Cow position:
Alignm length: 576
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 50

Conread position: 164-720
Cow position:
Alignm length: 575
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 187

Conread position: 164-720
Cow position:
Alignm length: 575
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 226

Conread position: 166-697
Cow position:
Alignm length: 556
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 182

Conread position: 168-720
Cow position:
Alignm length: 573
Alignm identity: 361
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 62

Conread position: 171-639
Cow position:
Alignm length: 483
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 111

Conread position: 171-697
Cow position:
Alignm length: 548
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 44

Conread position: 171-715
Cow position:
Alignm length: 559
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 59

Conread position: 171-716
Cow position:
Alignm length: 572
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 218

Conread position: 171-720
Cow position:
Alignm length: 568
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 571
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 567
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 48

Conread position: 171-720
Cow position:
Alignm length: 573
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 172-720
Cow position:
Alignm length: 567
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 64

Conread position: 177-639
Cow position:
Alignm length: 469
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 151

Conread position: 177-696
Cow position:
Alignm length: 539
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 75

Conread position: 179-394
Cow position:
Alignm length: 223
Alignm identity: 155
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 22, 35

Conread position: 179-720
Cow position:
Alignm length: 563
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 181-543
Cow position:
Alignm length: 375
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 208

Conread position: 181-697
Cow position:
Alignm length: 542
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 217

Conread position: 181-697
Cow position:
Alignm length: 534
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 44

Conread position: 181-707
Cow position:
Alignm length: 551
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 160

Conread position: 181-720
Cow position:
Alignm length: 558
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 40

Conread position: 183-718
Cow position:
Alignm length: 561
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 29

Conread position: 184-607
Cow position:
Alignm length: 432
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 157

Conread position: 193-569
Cow position:
Alignm length: 381
Alignm identity: 252
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 71, 16

Conread position: 194-707
Cow position:
Alignm length: 531
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 197

Conread position: 196-381
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 63

Conread position: 196-416
Cow position:
Alignm length: 226
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 156, 191

Conread position: 196-457
Cow position:
Alignm length: 268
Alignm identity: 182
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 113, 93

Conread position: 196-697
Cow position:
Alignm length: 522
Alignm identity: 337
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 21, 15

Conread position: 196-715
Cow position:
Alignm length: 539
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 22

Conread position: 196-720
Cow position:
Alignm length: 545
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 15

Conread position: 196-720
Cow position:
Alignm length: 545
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 15

Conread position: 196-720
Cow position:
Alignm length: 539
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 190

Conread position: 196-720
Cow position:
Alignm length: 545
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 146

Conread position: 196-725
Cow position:
Alignm length: 551
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 15

Conread position: 199-387
Cow position:
Alignm length: 192
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 199-720
Cow position:
Alignm length: 554
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 170

Conread position: 206-471
Cow position:
Alignm length: 272
Alignm identity: 193
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 107, 52

Conread position: 206-639
Cow position:
Alignm length: 447
Alignm identity: 295
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 11, 5

Conread position: 215-716
Cow position:
Alignm length: 517
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 57

Conread position: 216-720
Cow position:
Alignm length: 524
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 124

Conread position: 223-728
Cow position:
Alignm length: 522
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 93

Conread position: 226-665
Cow position:
Alignm length: 452
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 115

Conread position: 227-506
Cow position:
Alignm length: 282
Alignm identity: 193
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 169, 6

Conread position: 231-616
Cow position:
Alignm length: 391
Alignm identity: 249
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 22, 75

Conread position: 231-715
Cow position:
Alignm length: 508
Alignm identity: 317
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 48, 69

Conread position: 239-720
Cow position:
Alignm length: 506
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 57

Conread position: 253-712
Cow position:
Alignm length: 486
Alignm identity: 322
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 61, 132

Conread position: 254-668
Cow position:
Alignm length: 429
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 136

Conread position: 258-611
Cow position:
Alignm length: 364
Alignm identity: 250
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 51, 7

Conread position: 259-716
Cow position:
Alignm length: 488
Alignm identity: 318
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 6

Conread position: 259-720
Cow position:
Alignm length: 484
Alignm identity: 325
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 44

Conread position: 259-720
Cow position:
Alignm length: 477
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 6

Conread position: 268-721
Cow position:
Alignm length: 467
Alignm identity: 304
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 58, 45

Conread position: 268-725
Cow position:
Alignm length: 476
Alignm identity: 317
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 40, 77

Conread position: 282-498
Cow position:
Alignm length: 223
Alignm identity: 168
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 29, 104

Conread position: 284-720
Cow position:
Alignm length: 453
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 107

Conread position: 311-640
Cow position:
Alignm length: 338
Alignm identity: 221
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 85, 43

Conread position: 311-646
Cow position:
Alignm length: 342
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 50

Conread position: 311-710
Cow position:
Alignm length: 432
Alignm identity: 288
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 75

Conread position: 312-707
Cow position:
Alignm length: 410
Alignm identity: 265
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 84

Conread position: 314-569
Cow position:
Alignm length: 259
Alignm identity: 176
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 103, 68

Conread position: 318-697
Cow position:
Alignm length: 405
Alignm identity: 268
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 77, 70

Conread position: 319-544
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 77, 36

Conread position: 319-648
Cow position:
Alignm length: 339
Alignm identity: 243
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 77, 35

Conread position: 319-720
Cow position:
Alignm length: 412
Alignm identity: 280
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 80, 26

Conread position: 320-728
Cow position:
Alignm length: 420
Alignm identity: 287
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 73, 42

Conread position: 327-720
Cow position:
Alignm length: 406
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 61

Conread position: 329-656
Cow position:
Alignm length: 336
Alignm identity: 220
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 67, 60

Conread position: 329-707
Cow position:
Alignm length: 389
Alignm identity: 247
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 69, 61

Conread position: 338-710
Cow position:
Alignm length: 385
Alignm identity: 252
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 50

Conread position: 343-707
Cow position:
Alignm length: 381
Alignm identity: 248
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 53, 47

Conread position: 344-707
Cow position:
Alignm length: 375
Alignm identity: 254
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 52, 45

Conread position: 345-697
Cow position:
Alignm length: 367
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 23

Conread position: 349-720
Cow position:
Alignm length: 401
Alignm identity: 269
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 41

Conread position: 351-720
Cow position:
Alignm length: 385
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 37

Conread position: 351-728
Cow position:
Alignm length: 393
Alignm identity: 263
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 45, 37

Conread position: 363-691
Cow position:
Alignm length: 338
Alignm identity: 225
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 29

Conread position: 374-710
Cow position:
Alignm length: 352
Alignm identity: 243
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 45, 14

Conread position: 376-697
Cow position:
Alignm length: 336
Alignm identity: 234
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 22, 12

Conread position: 383-720
Cow position:
Alignm length: 353
Alignm identity: 234
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 80

Conread position: 391-588
Cow position:
Alignm length: 204
Alignm identity: 153
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 5, 42

Conread position: 397-720
Cow position:
Alignm length: 337
Alignm identity: 235
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 21, 65

Conread position: 402-646
Cow position:
Alignm length: 255
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 60

Conread position: 417-707
Cow position:
Alignm length: 303
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 37

Conread position: 420-720
Cow position:
Alignm length: 308
Alignm identity: 206
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 170, 40

Conread position: 420-720
Cow position:
Alignm length: 309
Alignm identity: 206
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 15

Conread position: 421-720
Cow position:
Alignm length: 310
Alignm identity: 216
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 145, 42

Conread position: 437-719
Cow position:
Alignm length: 298
Alignm identity: 205
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 23

Conread position: 445-697
Cow position:
Alignm length: 264
Alignm identity: 185
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 54, 15

Conread position: 447-721
Cow position:
Alignm length: 283
Alignm identity: 200
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 118, 14

Conread position: 474-722
Cow position:
Alignm length: 257
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 17

Conread position: 477-710
Cow position:
Alignm length: 248
Alignm identity: 171
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 93, 20

Conread position: 484-697
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 16

Conread position: 493-646
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 515-697
Cow position:
Alignm length: 191
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Show alignments to all cow chromosomes.