Cow genome map

Conread name: Ss1.1-Pig4-TMW8022G06.3

Conread position: 125-589
Cow position:
Alignm length: 489
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 269

Conread position: 125-697
Cow position:
Alignm length: 598
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 269

Conread position: 125-697
Cow position:
Alignm length: 593
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 266

Conread position: 125-697
Cow position:
Alignm length: 594
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 125-707
Cow position:
Alignm length: 621
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 232

Conread position: 125-720
Cow position:
Alignm length: 617
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 267

Conread position: 125-720
Cow position:
Alignm length: 620
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 6

Conread position: 126-707
Cow position:
Alignm length: 602
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 35

Conread position: 135-710
Cow position:
Alignm length: 602
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 88

Conread position: 135-720
Cow position:
Alignm length: 606
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 135-720
Cow position:
Alignm length: 611
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 156-716
Cow position:
Alignm length: 593
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 64

Conread position: 158-499
Cow position:
Alignm length: 352
Alignm identity: 228
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 231

Conread position: 158-547
Cow position:
Alignm length: 408
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 237

Conread position: 158-572
Cow position:
Alignm length: 431
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 41

Conread position: 158-583
Cow position:
Alignm length: 436
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 190

Conread position: 158-589
Cow position:
Alignm length: 439
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 38

Conread position: 158-635
Cow position:
Alignm length: 496
Alignm identity: 330
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 67, 37

Conread position: 158-697
Cow position:
Alignm length: 563
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 75

Conread position: 158-710
Cow position:
Alignm length: 576
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 148

Conread position: 158-711
Cow position:
Alignm length: 573
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 110

Conread position: 158-715
Cow position:
Alignm length: 583
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 59

Conread position: 161-611
Cow position:
Alignm length: 458
Alignm identity: 305
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 60, 50

Conread position: 161-641
Cow position:
Alignm length: 490
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 27

Conread position: 161-704
Cow position:
Alignm length: 550
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 27

Conread position: 161-720
Cow position:
Alignm length: 577
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 179

Conread position: 163-720
Cow position:
Alignm length: 579
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 137

Conread position: 163-720
Cow position:
Alignm length: 577
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 180

Conread position: 164-429
Cow position:
Alignm length: 267
Alignm identity: 183
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 65, 35

Conread position: 164-537
Cow position:
Alignm length: 384
Alignm identity: 262
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 34, 9

Conread position: 164-541
Cow position:
Alignm length: 388
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 197

Conread position: 164-545
Cow position:
Alignm length: 391
Alignm identity: 270
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 37, 180

Conread position: 164-568
Cow position:
Alignm length: 411
Alignm identity: 273
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 27, 65

Conread position: 164-599
Cow position:
Alignm length: 453
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 225

Conread position: 164-636
Cow position:
Alignm length: 493
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 71

Conread position: 164-640
Cow position:
Alignm length: 491
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 180

Conread position: 164-645
Cow position:
Alignm length: 493
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 114

Conread position: 164-693
Cow position:
Alignm length: 550
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 225

Conread position: 164-697
Cow position:
Alignm length: 555
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 98

Conread position: 164-707
Cow position:
Alignm length: 562
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 223

Conread position: 164-707
Cow position:
Alignm length: 570
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 228

Conread position: 164-716
Cow position:
Alignm length: 572
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 231

Conread position: 164-716
Cow position:
Alignm length: 590
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 208

Conread position: 164-720
Cow position:
Alignm length: 576
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 115

Conread position: 164-720
Cow position:
Alignm length: 586
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 210

Conread position: 164-720
Cow position:
Alignm length: 577
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 231

Conread position: 164-721
Cow position:
Alignm length: 586
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 104

Conread position: 165-719
Cow position:
Alignm length: 579
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 196

Conread position: 171-507
Cow position:
Alignm length: 349
Alignm identity: 234
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 30, 43

Conread position: 171-527
Cow position:
Alignm length: 369
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-560
Cow position:
Alignm length: 398
Alignm identity: 266
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 20, 89

Conread position: 171-562
Cow position:
Alignm length: 398
Alignm identity: 265
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 26, 133

Conread position: 171-697
Cow position:
Alignm length: 548
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-716
Cow position:
Alignm length: 567
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 571
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 217

Conread position: 171-720
Cow position:
Alignm length: 570
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 218

Conread position: 171-720
Cow position:
Alignm length: 566
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 27

Conread position: 171-720
Cow position:
Alignm length: 574
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-721
Cow position:
Alignm length: 573
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-728
Cow position:
Alignm length: 591
Alignm identity: 376
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 45

Conread position: 177-710
Cow position:
Alignm length: 562
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 174

Conread position: 178-534
Cow position:
Alignm length: 368
Alignm identity: 247
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 42

Conread position: 178-686
Cow position:
Alignm length: 526
Alignm identity: 339
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 28, 38

Conread position: 179-376
Cow position:
Alignm length: 205
Alignm identity: 143
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 22, 35

Conread position: 179-486
Cow position:
Alignm length: 316
Alignm identity: 204
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 22, 210

Conread position: 179-710
Cow position:
Alignm length: 550
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 35

Conread position: 181-553
Cow position:
Alignm length: 382
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 203

Conread position: 181-635
Cow position:
Alignm length: 462
Alignm identity: 300
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 19, 114

Conread position: 181-716
Cow position:
Alignm length: 551
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 165

Conread position: 181-716
Cow position:
Alignm length: 555
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 137

Conread position: 185-488
Cow position:
Alignm length: 309
Alignm identity: 206
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 114, 41

Conread position: 189-710
Cow position:
Alignm length: 541
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 26

Conread position: 190-626
Cow position:
Alignm length: 447
Alignm identity: 299
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 10, 35

Conread position: 190-688
Cow position:
Alignm length: 508
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 26

Conread position: 196-491
Cow position:
Alignm length: 306
Alignm identity: 211
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 21, 15

Conread position: 196-710
Cow position:
Alignm length: 554
Alignm identity: 347
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 68, 176

Conread position: 196-716
Cow position:
Alignm length: 537
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 27

Conread position: 196-720
Cow position:
Alignm length: 540
Alignm identity: 345
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 154, 113

Conread position: 199-697
Cow position:
Alignm length: 522
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 199

Conread position: 199-714
Cow position:
Alignm length: 540
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 145

Conread position: 199-721
Cow position:
Alignm length: 547
Alignm identity: 361
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 18, 29

Conread position: 201-707
Cow position:
Alignm length: 553
Alignm identity: 363
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 28, 189

Conread position: 202-720
Cow position:
Alignm length: 543
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 9

Conread position: 204-548
Cow position:
Alignm length: 349
Alignm identity: 233
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 180, 92

Conread position: 204-669
Cow position:
Alignm length: 487
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 137

Conread position: 207-715
Cow position:
Alignm length: 524
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 212-712
Cow position:
Alignm length: 519
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 175

Conread position: 224-643
Cow position:
Alignm length: 433
Alignm identity: 282
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 89, 16

Conread position: 225-720
Cow position:
Alignm length: 524
Alignm identity: 354
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 65, 8

Conread position: 228-710
Cow position:
Alignm length: 497
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 44

Conread position: 228-720
Cow position:
Alignm length: 510
Alignm identity: 303
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 81, 163

Conread position: 239-707
Cow position:
Alignm length: 492
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 151

Conread position: 243-636
Cow position:
Alignm length: 401
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 56

Conread position: 244-720
Cow position:
Alignm length: 493
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 70

Conread position: 265-646
Cow position:
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 91

Conread position: 268-667
Cow position:
Alignm length: 419
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 17

Conread position: 268-720
Cow position:
Alignm length: 471
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 126

Conread position: 271-646
Cow position:
Alignm length: 384
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 22

Conread position: 284-720
Cow position:
Alignm length: 455
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 18

Conread position: 312-697
Cow position:
Alignm length: 399
Alignm identity: 256
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 83, 26

Conread position: 314-701
Cow position:
Alignm length: 400
Alignm identity: 257
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 76

Conread position: 319-640
Cow position:
Alignm length: 325
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 69

Conread position: 319-656
Cow position:
Alignm length: 351
Alignm identity: 225
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 25

Conread position: 319-718
Cow position:
Alignm length: 411
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 31

Conread position: 327-646
Cow position:
Alignm length: 341
Alignm identity: 233
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 69, 22

Conread position: 328-720
Cow position:
Alignm length: 408
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 26

Conread position: 343-668
Cow position:
Alignm length: 343
Alignm identity: 230
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 53, 45

Conread position: 343-708
Cow position:
Alignm length: 377
Alignm identity: 256
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 45, 52

Conread position: 344-721
Cow position:
Alignm length: 396
Alignm identity: 262
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 47, 30

Conread position: 345-540
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 74, 37

Conread position: 356-720
Cow position:
Alignm length: 381
Alignm identity: 260
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 40, 26

Conread position: 363-557
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 7

Conread position: 368-720
Cow position:
Alignm length: 363
Alignm identity: 247
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 28, 20

Conread position: 370-716
Cow position:
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 14

Conread position: 372-720
Cow position:
Alignm length: 359
Alignm identity: 237
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 26, 12

Conread position: 374-589
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 22, 14

Conread position: 384-504
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 79

Conread position: 397-646
Cow position:
Alignm length: 256
Alignm identity: 186
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 73, 22

Conread position: 397-646
Cow position:
Alignm length: 256
Alignm identity: 184
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 73, 62

Conread position: 401-552
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 16, 65

Conread position: 401-707
Cow position:
Alignm length: 316
Alignm identity: 221
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 20, 64

Conread position: 401-716
Cow position:
Alignm length: 331
Alignm identity: 227
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 17, 61

Conread position: 417-688
Cow position:
Alignm length: 273
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 154, 30

Conread position: 417-720
Cow position:
Alignm length: 315
Alignm identity: 219
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 44, 184

Conread position: 417-725
Cow position:
Alignm length: 323
Alignm identity: 222
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 66, 34

Conread position: 422-715
Cow position:
Alignm length: 295
Alignm identity: 211
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 173, 38

Conread position: 422-728
Cow position:
Alignm length: 313
Alignm identity: 217
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 144, 38

Conread position: 423-680
Cow position:
Alignm length: 266
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 23

Conread position: 455-668
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 110, 175

Conread position: 470-729
Cow position:
Alignm length: 280
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 495-716
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 20

Show alignments to all cow chromosomes.