Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8022G06.3 |
| Conread position: | 113-716 |
| Cow position: | chr9:44818709-44819291 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 29 |
| Conread position: | 117-697 |
| Cow position: | chr9:31808111-31808703 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 197 |
| Conread position: | 122-466 |
| Cow position: | chr9:26083988-26083638 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 102 |
| Conread position: | 124-700 |
| Cow position: | chr9:51181653-51181048 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 267 |
| Conread position: | 125-697 |
| Cow position: | chr9:5004508-5005095 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 153 |
| Conread position: | 125-697 |
| Cow position: | chr9:10322338-10322927 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 46 |
| Conread position: | 125-698 |
| Cow position: | chr9:28022338-28022933 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 268 |
| Conread position: | 125-720 |
| Cow position: | chr9:22654106-22654724 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 179 |
| Conread position: | 128-720 |
| Cow position: | chr9:31065255-31065866 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 35 |
| Conread position: | 135-697 |
| Cow position: | chr9:37970652-37970081 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 106 |
| Conread position: | 135-720 |
| Cow position: | chr9:7061534-7060935 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 148 |
| Conread position: | 135-720 |
| Cow position: | chr9:51211225-51211829 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 138-695 |
| Cow position: | chr9:3936889-3936309 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 25 |
| Conread position: | 143-716 |
| Cow position: | chr9:3763559-3764143 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 93 |
| Conread position: | 158-608 |
| Cow position: | chr9:2476334-2476787 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 311 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 50, 76 |
| Conread position: | 158-667 |
| Cow position: | chr9:5514994-5515515 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 43 |
| Conread position: | 158-715 |
| Cow position: | chr9:2867401-2866825 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 20 |
| Conread position: | 158-719 |
| Cow position: | chr9:3167515-3168070 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 87 |
| Conread position: | 161-394 |
| Cow position: | chr9:30488147-30488381 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 52, 34 |
| Conread position: | 161-728 |
| Cow position: | chr9:28015060-28014495 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 383 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 36, 144 |
| Conread position: | 163-716 |
| Cow position: | chr9:4533073-4533640 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 79 |
| Conread position: | 164-470 |
| Cow position: | chr9:59173568-59173258 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 231 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 37, 61 |
| Conread position: | 164-484 |
| Cow position: | chr9:42569482-42569807 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 120 |
| Conread position: | 164-515 |
| Cow position: | chr9:7003386-7003734 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 252 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 37, 104 |
| Conread position: | 164-645 |
| Cow position: | chr9:27035260-27035751 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 229 |
| Conread position: | 164-656 |
| Cow position: | chr9:34722482-34722984 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 164-671 |
| Cow position: | chr9:52292006-52292498 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 131 |
| Conread position: | 164-697 |
| Cow position: | chr9:29628169-29627631 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 122 |
| Conread position: | 164-697 |
| Cow position: | chr9:42310263-42310804 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 111 |
| Conread position: | 164-697 |
| Cow position: | chr9:60277438-60276893 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 225 |
| Conread position: | 164-710 |
| Cow position: | chr9:32969528-32970086 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 122 |
| Conread position: | 164-716 |
| Cow position: | chr9:16176349-16176909 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 225 |
| Conread position: | 164-716 |
| Cow position: | chr9:43664381-43664906 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 24 |
| Conread position: | 164-720 |
| Cow position: | chr9:9013678-9014232 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 169 |
| Conread position: | 164-720 |
| Cow position: | chr9:12062579-12063138 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 129 |
| Conread position: | 164-720 |
| Cow position: | chr9:17305399-17304829 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 66 |
| Conread position: | 164-720 |
| Cow position: | chr9:47002773-47003334 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 53 |
| Conread position: | 166-706 |
| Cow position: | chr9:59536676-59537230 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 61 |
| Conread position: | 171-429 |
| Cow position: | chr9:36725086-36725350 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 30, 23 |
| Conread position: | 171-504 |
| Cow position: | chr9:2186462-2186792 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 26, 43 |
| Conread position: | 171-640 |
| Cow position: | chr9:221944-221449 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 324 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 30, 218 |
| Conread position: | 171-716 |
| Cow position: | chr9:1980856-1981419 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 224 |
| Conread position: | 171-716 |
| Cow position: | chr9:3005663-3005094 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 368 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 22, 141 |
| Conread position: | 171-716 |
| Cow position: | chr9:17063805-17063237 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 171-720 |
| Cow position: | chr9:780221-779673 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 367 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 42, 176 |
| Conread position: | 171-720 |
| Cow position: | chr9:1251413-1250852 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 378 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 171-720 |
| Cow position: | chr9:28678554-28679120 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 171-720 |
| Cow position: | chr9:50791296-50791858 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 169 |
| Conread position: | 172-504 |
| Cow position: | chr9:2209876-2210216 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 28, 42 |
| Conread position: | 172-639 |
| Cow position: | chr9:3148686-3148214 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 177-710 |
| Cow position: | chr9:7016481-7017015 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 178-439 |
| Cow position: | chr9:3738636-3738901 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 35, 67 |
| Conread position: | 178-638 |
| Cow position: | chr9:28696052-28696511 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 30, 184 |
| Conread position: | 179-639 |
| Cow position: | chr9:1075624-1075154 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 179-643 |
| Cow position: | chr9:7039943-7040394 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 8 |
| Conread position: | 179-710 |
| Cow position: | chr9:28440400-28440948 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 180-720 |
| Cow position: | chr9:25633411-25632870 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 57 |
| Conread position: | 181-359 |
| Cow position: | chr9:53702138-53701952 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 181-656 |
| Cow position: | chr9:26102490-26102020 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 101 |
| Conread position: | 181-697 |
| Cow position: | chr9:29027613-29027085 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 162 |
| Conread position: | 181-707 |
| Cow position: | chr9:48808737-48808227 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 345 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 35 |
| Conread position: | 181-714 |
| Cow position: | chr9:22431874-22432416 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 181-720 |
| Cow position: | chr9:25903108-25903653 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 370 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 20, 33 |
| Conread position: | 181-720 |
| Cow position: | chr9:28654950-28655497 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 124 |
| Conread position: | 181-720 |
| Cow position: | chr9:37162219-37161664 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 208 |
| Conread position: | 184-697 |
| Cow position: | chr9:10937194-10937721 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 117 |
| Conread position: | 186-523 |
| Cow position: | chr9:20308553-20308207 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 58 |
| Conread position: | 194-563 |
| Cow position: | chr9:2053370-2053740 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 20, 86 |
| Conread position: | 195-716 |
| Cow position: | chr9:4649983-4649463 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 192 |
| Conread position: | 196-519 |
| Cow position: | chr9:3566232-3565907 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 113, 26 |
| Conread position: | 196-565 |
| Cow position: | chr9:828523-828147 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 255 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 112, 132 |
| Conread position: | 196-636 |
| Cow position: | chr9:25035100-25034651 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 196-697 |
| Cow position: | chr9:2498370-2497853 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 346 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 116, 147 |
| Conread position: | 196-697 |
| Cow position: | chr9:30672978-30673501 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 190 |
| Conread position: | 196-720 |
| Cow position: | chr9:4943199-4942664 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 197-646 |
| Cow position: | chr9:3543476-3543919 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 17 |
| Conread position: | 198-615 |
| Cow position: | chr9:45150798-45151213 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 16 |
| Conread position: | 199-720 |
| Cow position: | chr9:6249915-6250446 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 187 |
| Conread position: | 199-720 |
| Cow position: | chr9:27934994-27935525 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 349 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 18, 12 |
| Conread position: | 200-721 |
| Cow position: | chr9:25187724-25188249 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 161 |
| Conread position: | 201-475 |
| Cow position: | chr9:8402151-8402422 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 112, 64 |
| Conread position: | 208-697 |
| Cow position: | chr9:59482167-59481670 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 71 |
| Conread position: | 219-720 |
| Cow position: | chr9:651379-650879 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 142 |
| Conread position: | 223-468 |
| Cow position: | chr9:6829677-6829430 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 11, 119 |
| Conread position: | 231-589 |
| Cow position: | chr9:2171694-2172065 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 154 |
| Conread position: | 239-589 |
| Cow position: | chr9:13475132-13474776 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 25, 148 |
| Conread position: | 240-710 |
| Cow position: | chr9:50729476-50729000 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 134 |
| Conread position: | 259-695 |
| Cow position: | chr9:18509137-18508698 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 6 |
| Conread position: | 259-716 |
| Cow position: | chr9:33243663-33243187 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 318 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 55, 133 |
| Conread position: | 259-720 |
| Cow position: | chr9:64015965-64015499 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 308 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 46, 6 |
| Conread position: | 265-706 |
| Cow position: | chr9:39731373-39730923 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 126 |
| Conread position: | 268-707 |
| Cow position: | chr9:9646815-9647258 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 123 |
| Conread position: | 292-646 |
| Cow position: | chr9:29329345-29329705 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 311-548 |
| Cow position: | chr9:9824881-9825119 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 85, 77 |
| Conread position: | 311-720 |
| Cow position: | chr9:21410023-21410445 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 72 |
| Conread position: | 312-644 |
| Cow position: | chr9:34724220-34724535 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 84, 70 |
| Conread position: | 314-710 |
| Cow position: | chr9:24981186-24980785 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 68 |
| Conread position: | 319-710 |
| Cow position: | chr9:3804282-3804690 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 76, 67 |
| Conread position: | 319-720 |
| Cow position: | chr9:32296503-32296103 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 69 |
| Conread position: | 319-721 |
| Cow position: | chr9:8166144-8165736 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 70 |
| Conread position: | 322-504 |
| Cow position: | chr9:44453486-44453669 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 74, 66 |
| Conread position: | 325-715 |
| Cow position: | chr9:3727341-3727746 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 61 |
| Conread position: | 328-710 |
| Cow position: | chr9:6977084-6977470 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 275 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 68, 55 |
| Conread position: | 330-641 |
| Cow position: | chr9:19009335-19009024 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 66, 17 |
| Conread position: | 343-545 |
| Cow position: | chr9:39942192-39942391 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 53, 39 |
| Conread position: | 343-687 |
| Cow position: | chr9:7091977-7092323 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 247 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 53, 45 |
| Conread position: | 343-697 |
| Cow position: | chr9:10701263-10701619 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 343-710 |
| Cow position: | chr9:4282739-4283107 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 15 |
| Conread position: | 343-714 |
| Cow position: | chr9:4978865-4979248 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 261 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 53, 45 |
| Conread position: | 343-715 |
| Cow position: | chr9:17070117-17069760 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 53, 45 |
| Conread position: | 344-711 |
| Cow position: | chr9:50698069-50698439 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 54, 11 |
| Conread position: | 349-588 |
| Cow position: | chr9:16629901-16629658 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 47, 39 |
| Conread position: | 354-704 |
| Cow position: | chr9:3963353-3962997 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 251 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 42, 33 |
| Conread position: | 361-716 |
| Cow position: | chr9:59427812-59428155 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 35, 27 |
| Conread position: | 376-720 |
| Cow position: | chr9:27782979-27783336 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 12 |
| Conread position: | 393-545 |
| Cow position: | chr9:46852209-46852360 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 43 |
| Conread position: | 396-720 |
| Cow position: | chr9:30827549-30827885 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 25, 68 |
| Conread position: | 397-683 |
| Cow position: | chr9:5141534-5141824 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 23, 68 |
| Conread position: | 398-646 |
| Cow position: | chr9:30488412-30488663 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 168, 65 |
| Conread position: | 400-557 |
| Cow position: | chr9:4661316-4661157 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 401-687 |
| Cow position: | chr9:31046504-31046211 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 21, 62 |
| Conread position: | 435-720 |
| Cow position: | chr9:1995536-1995242 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 64, 25 |
| Conread position: | 452-720 |
| Cow position: | chr9:41467707-41467975 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 117, 10 |
| Conread position: | 456-564 |
| Cow position: | chr9:54393119-54393011 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 479-709 |
| Cow position: | chr9:19158644-19158401 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 484-720 |
| Cow position: | chr9:52033607-52033840 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 89, 65 |
Show alignments to all cow chromosomes.