Cow genome map

Conread name: Ss1.1-Pig4-TMW8022G06.3

Conread position: 113-716
Cow position:
Alignm length: 615
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 29

Conread position: 117-697
Cow position:
Alignm length: 598
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 197

Conread position: 122-466
Cow position:
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 102

Conread position: 124-700
Cow position:
Alignm length: 608
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 267

Conread position: 125-697
Cow position:
Alignm length: 597
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 153

Conread position: 125-697
Cow position:
Alignm length: 596
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 46

Conread position: 125-698
Cow position:
Alignm length: 599
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 268

Conread position: 125-720
Cow position:
Alignm length: 623
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 179

Conread position: 128-720
Cow position:
Alignm length: 620
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 35

Conread position: 135-697
Cow position:
Alignm length: 584
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 106

Conread position: 135-720
Cow position:
Alignm length: 608
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 148

Conread position: 135-720
Cow position:
Alignm length: 612
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 138-695
Cow position:
Alignm length: 588
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 25

Conread position: 143-716
Cow position:
Alignm length: 593
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 93

Conread position: 158-608
Cow position:
Alignm length: 465
Alignm identity: 311
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 50, 76

Conread position: 158-667
Cow position:
Alignm length: 532
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 43

Conread position: 158-715
Cow position:
Alignm length: 588
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 20

Conread position: 158-719
Cow position:
Alignm length: 578
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 87

Conread position: 161-394
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 52, 34

Conread position: 161-728
Cow position:
Alignm length: 589
Alignm identity: 383
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 144

Conread position: 163-716
Cow position:
Alignm length: 579
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 79

Conread position: 164-470
Cow position:
Alignm length: 318
Alignm identity: 231
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 37, 61

Conread position: 164-484
Cow position:
Alignm length: 330
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 120

Conread position: 164-515
Cow position:
Alignm length: 361
Alignm identity: 252
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 37, 104

Conread position: 164-645
Cow position:
Alignm length: 494
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 229

Conread position: 164-656
Cow position:
Alignm length: 515
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 50

Conread position: 164-671
Cow position:
Alignm length: 516
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 131

Conread position: 164-697
Cow position:
Alignm length: 548
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 122

Conread position: 164-697
Cow position:
Alignm length: 552
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 111

Conread position: 164-697
Cow position:
Alignm length: 553
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 225

Conread position: 164-710
Cow position:
Alignm length: 565
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 122

Conread position: 164-716
Cow position:
Alignm length: 567
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 225

Conread position: 164-716
Cow position:
Alignm length: 563
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 24

Conread position: 164-720
Cow position:
Alignm length: 572
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 169

Conread position: 164-720
Cow position:
Alignm length: 572
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 129

Conread position: 164-720
Cow position:
Alignm length: 575
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 66

Conread position: 164-720
Cow position:
Alignm length: 573
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 53

Conread position: 166-706
Cow position:
Alignm length: 563
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 61

Conread position: 171-429
Cow position:
Alignm length: 268
Alignm identity: 180
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 30, 23

Conread position: 171-504
Cow position:
Alignm length: 346
Alignm identity: 235
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 26, 43

Conread position: 171-640
Cow position:
Alignm length: 501
Alignm identity: 324
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 30, 218

Conread position: 171-716
Cow position:
Alignm length: 567
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 224

Conread position: 171-716
Cow position:
Alignm length: 576
Alignm identity: 368
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 141

Conread position: 171-716
Cow position:
Alignm length: 573
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 567
Alignm identity: 367
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 42, 176

Conread position: 171-720
Cow position:
Alignm length: 578
Alignm identity: 378
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 573
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 570
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 169

Conread position: 172-504
Cow position:
Alignm length: 346
Alignm identity: 240
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 28, 42

Conread position: 172-639
Cow position:
Alignm length: 481
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 42

Conread position: 177-710
Cow position:
Alignm length: 549
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 19

Conread position: 178-439
Cow position:
Alignm length: 271
Alignm identity: 181
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 67

Conread position: 178-638
Cow position:
Alignm length: 472
Alignm identity: 297
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 184

Conread position: 179-639
Cow position:
Alignm length: 480
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 35

Conread position: 179-643
Cow position:
Alignm length: 477
Alignm identity: 307
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 8

Conread position: 179-710
Cow position:
Alignm length: 554
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 35

Conread position: 180-720
Cow position:
Alignm length: 556
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 57

Conread position: 181-359
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 181-656
Cow position:
Alignm length: 484
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 101

Conread position: 181-697
Cow position:
Alignm length: 535
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 162

Conread position: 181-707
Cow position:
Alignm length: 541
Alignm identity: 345
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 35

Conread position: 181-714
Cow position:
Alignm length: 550
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 13

Conread position: 181-720
Cow position:
Alignm length: 563
Alignm identity: 370
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 20, 33

Conread position: 181-720
Cow position:
Alignm length: 558
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 124

Conread position: 181-720
Cow position:
Alignm length: 560
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 208

Conread position: 184-697
Cow position:
Alignm length: 534
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 117

Conread position: 186-523
Cow position:
Alignm length: 353
Alignm identity: 238
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 58

Conread position: 194-563
Cow position:
Alignm length: 384
Alignm identity: 258
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 86

Conread position: 195-716
Cow position:
Alignm length: 530
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 192

Conread position: 196-519
Cow position:
Alignm length: 330
Alignm identity: 222
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 113, 26

Conread position: 196-565
Cow position:
Alignm length: 380
Alignm identity: 255
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 112, 132

Conread position: 196-636
Cow position:
Alignm length: 454
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 15

Conread position: 196-697
Cow position:
Alignm length: 533
Alignm identity: 346
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 116, 147

Conread position: 196-697
Cow position:
Alignm length: 526
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 190

Conread position: 196-720
Cow position:
Alignm length: 542
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 15

Conread position: 197-646
Cow position:
Alignm length: 460
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 17

Conread position: 198-615
Cow position:
Alignm length: 426
Alignm identity: 266
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 16

Conread position: 199-720
Cow position:
Alignm length: 536
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 187

Conread position: 199-720
Cow position:
Alignm length: 541
Alignm identity: 349
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 18, 12

Conread position: 200-721
Cow position:
Alignm length: 542
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 161

Conread position: 201-475
Cow position:
Alignm length: 281
Alignm identity: 194
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 112, 64

Conread position: 208-697
Cow position:
Alignm length: 506
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 71

Conread position: 219-720
Cow position:
Alignm length: 518
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 142

Conread position: 223-468
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 119

Conread position: 231-589
Cow position:
Alignm length: 374
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 154

Conread position: 239-589
Cow position:
Alignm length: 364
Alignm identity: 239
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 148

Conread position: 240-710
Cow position:
Alignm length: 485
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 134

Conread position: 259-695
Cow position:
Alignm length: 453
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 6

Conread position: 259-716
Cow position:
Alignm length: 482
Alignm identity: 318
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 55, 133

Conread position: 259-720
Cow position:
Alignm length: 477
Alignm identity: 308
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 46, 6

Conread position: 265-706
Cow position:
Alignm length: 458
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 126

Conread position: 268-707
Cow position:
Alignm length: 454
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 123

Conread position: 292-646
Cow position:
Alignm length: 365
Alignm identity: 249
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 55, 21

Conread position: 311-548
Cow position:
Alignm length: 243
Alignm identity: 168
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 85, 77

Conread position: 311-720
Cow position:
Alignm length: 426
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 72

Conread position: 312-644
Cow position:
Alignm length: 336
Alignm identity: 222
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 84, 70

Conread position: 314-710
Cow position:
Alignm length: 410
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 68

Conread position: 319-710
Cow position:
Alignm length: 411
Alignm identity: 278
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 76, 67

Conread position: 319-720
Cow position:
Alignm length: 414
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 69

Conread position: 319-721
Cow position:
Alignm length: 413
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 70

Conread position: 322-504
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 66

Conread position: 325-715
Cow position:
Alignm length: 411
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 61

Conread position: 328-710
Cow position:
Alignm length: 398
Alignm identity: 275
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 68, 55

Conread position: 330-641
Cow position:
Alignm length: 319
Alignm identity: 207
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 66, 17

Conread position: 343-545
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 53, 39

Conread position: 343-687
Cow position:
Alignm length: 358
Alignm identity: 247
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 53, 45

Conread position: 343-697
Cow position:
Alignm length: 370
Alignm identity: 253
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 55, 40

Conread position: 343-710
Cow position:
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 15

Conread position: 343-714
Cow position:
Alignm length: 391
Alignm identity: 261
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 53, 45

Conread position: 343-715
Cow position:
Alignm length: 379
Alignm identity: 255
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 45

Conread position: 344-711
Cow position:
Alignm length: 381
Alignm identity: 266
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 11

Conread position: 349-588
Cow position:
Alignm length: 248
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 39

Conread position: 354-704
Cow position:
Alignm length: 362
Alignm identity: 251
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 42, 33

Conread position: 361-716
Cow position:
Alignm length: 366
Alignm identity: 247
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 27

Conread position: 376-720
Cow position:
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 12

Conread position: 393-545
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 43

Conread position: 396-720
Cow position:
Alignm length: 341
Alignm identity: 229
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 25, 68

Conread position: 397-683
Cow position:
Alignm length: 298
Alignm identity: 213
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 23, 68

Conread position: 398-646
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 168, 65

Conread position: 400-557
Cow position:
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 401-687
Cow position:
Alignm length: 300
Alignm identity: 208
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 21, 62

Conread position: 435-720
Cow position:
Alignm length: 298
Alignm identity: 211
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 64, 25

Conread position: 452-720
Cow position:
Alignm length: 280
Alignm identity: 189
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 117, 10

Conread position: 456-564
Cow position:
Alignm length: 109
Alignm identity: 92
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 479-709
Cow position:
Alignm length: 244
Alignm identity: 170
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 484-720
Cow position:
Alignm length: 246
Alignm identity: 183
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 89, 65

Show alignments to all cow chromosomes.