Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8022H01.5
        

               Conread position:
               1-209
               

               Cow position:
               chr3:18815279-18815487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               129, 145
               

               Conread position:
               4-207
               

               Cow position:
               chr3:79921467-79921263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               4-325
               

               Cow position:
               chr3:10346972-10347302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               88, 243
               

               Conread position:
               5-211
               

               Cow position:
               chr3:45184214-45184016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               5-237
               

               Cow position:
               chr3:79139359-79139126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               96, 195
               

               Conread position:
               5-242
               

               Cow position:
               chr3:6402923-6403159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 0
               

               Conread position:
               5-245
               

               Cow position:
               chr3:36672378-36672133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               116, 43
               

               Conread position:
               5-258
               

               Cow position:
               chr3:7763295-7763545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               116, 14
               

               Conread position:
               5-269
               

               Cow position:
               chr3:58951247-58951511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-287
               

               Cow position:
               chr3:84419156-84418874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               204, 116
               

               Conread position:
               5-288
               

               Cow position:
               chr3:65236645-65236934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               88, 178
               

               Conread position:
               5-296
               

               Cow position:
               chr3:6265132-6265429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               5-304
               

               Cow position:
               chr3:13517529-13517231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               234, 145
               

               Conread position:
               5-317
               

               Cow position:
               chr3:4135192-4134872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               185, 254
               

               Conread position:
               5-322
               

               Cow position:
               chr3:13248225-13247906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               197, 35
               

               Conread position:
               6-109
               

               Cow position:
               chr3:25011927-25012030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-109
               

               Cow position:
               chr3:72633867-72633969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               6-109
               

               Cow position:
               chr3:73394501-73394604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-110
               

               Cow position:
               chr3:495657-495553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-110
               

               Cow position:
               chr3:69419289-69419185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-110
               

               Cow position:
               chr3:76138067-76138171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-110
               

               Cow position:
               chr3:83775364-83775260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-111
               

               Cow position:
               chr3:48242135-48242030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-115
               

               Cow position:
               chr3:61894634-61894744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               6-117
               

               Cow position:
               chr3:24572275-24572164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-124
               

               Cow position:
               chr3:73450519-73450398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               6-125
               

               Cow position:
               chr3:36082187-36082068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-126
               

               Cow position:
               chr3:30322321-30322441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-127
               

               Cow position:
               chr3:18907656-18907777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-127
               

               Cow position:
               chr3:29328138-29328017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-128
               

               Cow position:
               chr3:2118264-2118388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               6-128
               

               Cow position:
               chr3:34819593-34819471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-128
               

               Cow position:
               chr3:36874266-36874144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-128
               

               Cow position:
               chr3:49133912-49133790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-128
               

               Cow position:
               chr3:64749108-64749230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-128
               

               Cow position:
               chr3:65391647-65391769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-128
               

               Cow position:
               chr3:67196533-67196411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-128
               

               Cow position:
               chr3:82398251-82398371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               6-131
               

               Cow position:
               chr3:38698168-38698293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-135
               

               Cow position:
               chr3:59621977-59621851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               6-136
               

               Cow position:
               chr3:15191980-15192105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               6-150
               

               Cow position:
               chr3:68156108-68156247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               6-154
               

               Cow position:
               chr3:8591713-8591570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               6-164
               

               Cow position:
               chr3:5405608-5405449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               103, 127
               

               Conread position:
               6-164
               

               Cow position:
               chr3:14627609-14627450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               6-167
               

               Cow position:
               chr3:26712254-26712093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               135, 122
               

               Conread position:
               6-170
               

               Cow position:
               chr3:57789272-57789438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               87, 59
               

               Conread position:
               6-176
               

               Cow position:
               chr3:19942678-19942846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               74, 69
               

               Conread position:
               6-176
               

               Cow position:
               chr3:26931262-26931092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-179
               

               Cow position:
               chr3:83845236-83845411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               6-182
               

               Cow position:
               chr3:21655714-21655889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               6-183
               

               Cow position:
               chr3:43189471-43189292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               89, 124
               

               Conread position:
               6-184
               

               Cow position:
               chr3:32221515-32221689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               135, 53
               

               Conread position:
               6-185
               

               Cow position:
               chr3:4120487-4120662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               6-186
               

               Cow position:
               chr3:4344219-4344400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               73, 146
               

               Conread position:
               6-186
               

               Cow position:
               chr3:32485375-32485555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-186
               

               Cow position:
               chr3:58766919-58767086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               18, 35
               

               Conread position:
               6-186
               

               Cow position:
               chr3:64375924-64375746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               88, 107
               

               Conread position:
               6-186
               

               Cow position:
               chr3:76927201-76927372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               6-190
               

               Cow position:
               chr3:16290939-16290764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               6-190
               

               Cow position:
               chr3:62784951-62784769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               138, 43
               

               Conread position:
               6-191
               

               Cow position:
               chr3:3257388-3257203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-191
               

               Cow position:
               chr3:6754480-6754664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               6-192
               

               Cow position:
               chr3:13480491-13480675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               6-194
               

               Cow position:
               chr3:38096696-38096884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               137, 148
               

               Conread position:
               6-195
               

               Cow position:
               chr3:2364464-2364275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               135, 122
               

               Conread position:
               6-195
               

               Cow position:
               chr3:7696646-7696835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-195
               

               Cow position:
               chr3:12027906-12028095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-195
               

               Cow position:
               chr3:13470008-13469821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               6-195
               

               Cow position:
               chr3:17885312-17885501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-195
               

               Cow position:
               chr3:26801880-26802065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               6-195
               

               Cow position:
               chr3:29282549-29282738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-195
               

               Cow position:
               chr3:35488521-35488331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               6-195
               

               Cow position:
               chr3:46349899-46350088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-195
               

               Cow position:
               chr3:57464620-57464808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               136, 150
               

               Conread position:
               6-195
               

               Cow position:
               chr3:73305737-73305926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-195
               

               Cow position:
               chr3:79094439-79094254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               6-195
               

               Cow position:
               chr3:83437475-83437287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               182, 0
               

               Conread position:
               6-196
               

               Cow position:
               chr3:4691629-4691820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               129, 76
               

               Conread position:
               6-198
               

               Cow position:
               chr3:597916-598108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               135, 115
               

               Conread position:
               6-200
               

               Cow position:
               chr3:174561-174750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               6-200
               

               Cow position:
               chr3:2334912-2335103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               6-200
               

               Cow position:
               chr3:3372390-3372196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-200
               

               Cow position:
               chr3:6384296-6384489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               6-200
               

               Cow position:
               chr3:11785146-11785340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               135, 122
               

               Conread position:
               6-200
               

               Cow position:
               chr3:15161448-15161258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               6-200
               

               Cow position:
               chr3:26474784-26474982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               88, 167
               

               Conread position:
               6-200
               

               Cow position:
               chr3:33268697-33268506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               6-200
               

               Cow position:
               chr3:42187279-42187476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               130, 158
               

               Conread position:
               6-200
               

               Cow position:
               chr3:42670951-42671141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               155
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               6-200
               

               Cow position:
               chr3:44927609-44927803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-200
               

               Cow position:
               chr3:45700461-45700654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               6-200
               

               Cow position:
               chr3:47987258-47987456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               6-200
               

               Cow position:
               chr3:56328984-56329178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-200
               

               Cow position:
               chr3:64216366-64216564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               6-200
               

               Cow position:
               chr3:70840517-70840328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               6-200
               

               Cow position:
               chr3:77892316-77892122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-200
               

               Cow position:
               chr3:80444711-80444517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               135, 122
               

               Conread position:
               6-200
               

               Cow position:
               chr3:81374456-81374263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               6-203
               

               Cow position:
               chr3:42930044-42929847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-203
               

               Cow position:
               chr3:80469024-80468827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               92, 116
               

               Conread position:
               6-206
               

               Cow position:
               chr3:41057756-41057959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               135, 122
               

               Conread position:
               6-208
               

               Cow position:
               chr3:6433923-6434122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               6-208
               

               Cow position:
               chr3:11447629-11447826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               6-208
               

               Cow position:
               chr3:21062401-21062611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               6-208
               

               Cow position:
               chr3:32326154-32325952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               135, 122
               

               Conread position:
               6-208
               

               Cow position:
               chr3:40284553-40284351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               135, 122
               

               Conread position:
               6-208
               

               Cow position:
               chr3:62321519-62321309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 131
               

               Conread position:
               6-208
               

               Cow position:
               chr3:65273771-65273572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               6-208
               

               Cow position:
               chr3:76000163-75999961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               135, 122
               

               Conread position:
               6-209
               

               Cow position:
               chr3:23072161-23072367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 137
               

               Conread position:
               6-209
               

               Cow position:
               chr3:29172010-29172213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-211
               

               Cow position:
               chr3:19959390-19959597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               130, 202
               

               Conread position:
               6-212
               

               Cow position:
               chr3:6058959-6058755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:8240555-8240758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               135, 94
               

               Conread position:
               6-212
               

               Cow position:
               chr3:14261228-14261432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:19797307-19797103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:22511293-22511088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               115, 199
               

               Conread position:
               6-212
               

               Cow position:
               chr3:24265993-24266197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:26638752-26638956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:27687566-27687363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:28434781-28434577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:30301785-30301989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:30352077-30352281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:31023113-31023316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:34016369-34016573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:35043955-35044159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:40049681-40049885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:48574113-48573910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:49610420-49610216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:49768941-49769145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:49907239-49907033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:50960009-50960213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:56298174-56298378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:60054603-60054809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               124, 70
               

               Conread position:
               6-212
               

               Cow position:
               chr3:64654430-64654634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:65085729-65085932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:66968083-66967879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:67398203-67397998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               127, 199
               

               Conread position:
               6-212
               

               Cow position:
               chr3:77753722-77753926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:78472195-78471992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               6-212
               

               Cow position:
               chr3:81064220-81064423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               6-213
               

               Cow position:
               chr3:2901499-2901294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               6-214
               

               Cow position:
               chr3:79272163-79271957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               93, 132
               

               Conread position:
               6-215
               

               Cow position:
               chr3:10958598-10958393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               164
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               6-227
               

               Cow position:
               chr3:31225082-31225301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               83, 14
               

               Conread position:
               6-227
               

               Cow position:
               chr3:56576023-56575803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               184, 0
               

               Conread position:
               6-228
               

               Cow position:
               chr3:56335886-56335666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               6-229
               

               Cow position:
               chr3:14280471-14280693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               179, 0
               

               Conread position:
               6-229
               

               Cow position:
               chr3:20562082-20561861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               6-232
               

               Cow position:
               chr3:54346596-54346370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               191, 84
               

               Conread position:
               6-237
               

               Cow position:
               chr3:18887206-18887443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               6-237
               

               Cow position:
               chr3:55985297-55985532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               191, 0
               

               Conread position:
               6-239
               

               Cow position:
               chr3:57022205-57022430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               6-241
               

               Cow position:
               chr3:6092953-6092728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               6-241
               

               Cow position:
               chr3:40345027-40345266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               6-241
               

               Cow position:
               chr3:56375928-56376171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               6-242
               

               Cow position:
               chr3:11789767-11790000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 53
               

               Conread position:
               6-242
               

               Cow position:
               chr3:19711688-19711448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 153
               

               Conread position:
               6-242
               

               Cow position:
               chr3:24823602-24823841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               208, 58
               

               Conread position:
               6-242
               

               Cow position:
               chr3:44254808-44254563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               95, 122
               

               Conread position:
               6-242
               

               Cow position:
               chr3:58953925-58954164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               81, 117
               

               Conread position:
               6-242
               

               Cow position:
               chr3:68291196-68291432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               179, 11
               

               Conread position:
               6-242
               

               Cow position:
               chr3:74754610-74754851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               74, 204
               

               Conread position:
               6-243
               

               Cow position:
               chr3:34953281-34953522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               180, 0
               

               Conread position:
               6-243
               

               Cow position:
               chr3:38255436-38255666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               6-243
               

               Cow position:
               chr3:41818461-41818228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               6-243
               

               Cow position:
               chr3:50329448-50329211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-243
               

               Cow position:
               chr3:50461968-50462205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               19, 80
               

               Conread position:
               6-243
               

               Cow position:
               chr3:54789603-54789834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               6-243
               

               Cow position:
               chr3:75143405-75143168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-244
               

               Cow position:
               chr3:2537884-2538117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               195, 70
               

               Conread position:
               6-244
               

               Cow position:
               chr3:3776661-3776903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               6-244
               

               Cow position:
               chr3:50359110-50358860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               6-244
               

               Cow position:
               chr3:68302955-68303197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               179, 0
               

               Conread position:
               6-244
               

               Cow position:
               chr3:79690881-79691112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               6-245
               

               Cow position:
               chr3:47737259-47737023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               6-246
               

               Cow position:
               chr3:35612938-35613183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               182, 0
               

               Conread position:
               6-247
               

               Cow position:
               chr3:51032972-51033214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               191, 115
               

               Conread position:
               6-247
               

               Cow position:
               chr3:72530810-72531054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               111, 82
               

               Conread position:
               6-248
               

               Cow position:
               chr3:52693862-52693625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               233, 84
               

               Conread position:
               6-257
               

               Cow position:
               chr3:84152942-84153203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               6-259
               

               Cow position:
               chr3:9116537-9116783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               248, 70
               

               Conread position:
               6-262
               

               Cow position:
               chr3:23992861-23993128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               6-263
               

               Cow position:
               chr3:23011147-23011403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               135, 74
               

               Conread position:
               6-266
               

               Cow position:
               chr3:55733570-55733829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               248, 115
               

               Conread position:
               6-267
               

               Cow position:
               chr3:66623981-66624245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               6-268
               

               Cow position:
               chr3:5950800-5950536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               208, 70
               

               Conread position:
               6-270
               

               Cow position:
               chr3:22908204-22907940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               184, 70
               

               Conread position:
               6-272
               

               Cow position:
               chr3:26722019-26721752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               137, 115
               

               Conread position:
               6-272
               

               Cow position:
               chr3:34526017-34525746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               211, 115
               

               Conread position:
               6-273
               

               Cow position:
               chr3:22723994-22723730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               169, 130
               

               Conread position:
               6-273
               

               Cow position:
               chr3:28357972-28357700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               180, 0
               

               Conread position:
               6-273
               

               Cow position:
               chr3:73962052-73961786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               237, 185
               

               Conread position:
               6-275
               

               Cow position:
               chr3:57457435-57457706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               248, 68
               

               Conread position:
               6-279
               

               Cow position:
               chr3:40568398-40568122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               180, 122
               

               Conread position:
               6-285
               

               Cow position:
               chr3:36657146-36656863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               6-285
               

               Cow position:
               chr3:53223021-53222733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               6-286
               

               Cow position:
               chr3:56976360-56976084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               233, 84
               

               Conread position:
               6-286
               

               Cow position:
               chr3:72603977-72604262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               191, 0
               

               Conread position:
               6-287
               

               Cow position:
               chr3:14724925-14725210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               180, 46
               

               Conread position:
               6-287
               

               Cow position:
               chr3:18933066-18933352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               182, 265
               

               Conread position:
               6-287
               

               Cow position:
               chr3:19691699-19691416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               169, 181
               

               Conread position:
               6-287
               

               Cow position:
               chr3:39065960-39066246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               180, 198
               

               Conread position:
               6-287
               

               Cow position:
               chr3:45946730-45946444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               75, 71
               

               Conread position:
               6-287
               

               Cow position:
               chr3:54766750-54767022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               135, 105
               

               Conread position:
               6-287
               

               Cow position:
               chr3:54808786-54809068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               233, 0
               

               Conread position:
               6-287
               

               Cow position:
               chr3:62999369-62999089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               180, 25
               

               Conread position:
               6-287
               

               Cow position:
               chr3:66738400-66738686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               175, 115
               

               Conread position:
               6-288
               

               Cow position:
               chr3:20998053-20997770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               135, 122
               

               Conread position:
               6-288
               

               Cow position:
               chr3:24350757-24351033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               135, 84
               

               Conread position:
               6-288
               

               Cow position:
               chr3:26894298-26894570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               189, 70
               

               Conread position:
               6-290
               

               Cow position:
               chr3:46753637-46753926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               77, 127
               

               Conread position:
               6-293
               

               Cow position:
               chr3:226100-225821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               233, 81
               

               Conread position:
               6-293
               

               Cow position:
               chr3:2035925-2036213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 0
               

               Conread position:
               6-293
               

               Cow position:
               chr3:14453454-14453743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               217, 132
               

               Conread position:
               6-293
               

               Cow position:
               chr3:65325753-65325457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               6-296
               

               Cow position:
               chr3:3954122-3954413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               135, 122
               

               Conread position:
               6-296
               

               Cow position:
               chr3:5495869-5495578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               108, 47
               

               Conread position:
               6-296
               

               Cow position:
               chr3:6078708-6078413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               180, 0
               

               Conread position:
               6-296
               

               Cow position:
               chr3:6689622-6689918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               133, 30
               

               Conread position:
               6-296
               

               Cow position:
               chr3:6863998-6863704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               164, 94
               

               Conread position:
               6-296
               

               Cow position:
               chr3:8148035-8147751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               233, 68
               

               Conread position:
               6-296
               

               Cow position:
               chr3:8159582-8159871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               135, 115
               

               Conread position:
               6-296
               

               Cow position:
               chr3:11410474-11410181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               124, 58
               

               Conread position:
               6-296
               

               Cow position:
               chr3:17709967-17710253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               233, 70
               

               Conread position:
               6-296
               

               Cow position:
               chr3:18279806-18279512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               34, 116
               

               Conread position:
               6-296
               

               Cow position:
               chr3:21070615-21070325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               135, 122
               

               Conread position:
               6-296
               

               Cow position:
               chr3:21100598-21100890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               135, 82
               

               Conread position:
               6-296
               

               Cow position:
               chr3:26973840-26973543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               191, 0
               

               Conread position:
               6-296
               

               Cow position:
               chr3:28635101-28634807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               163, 27
               

               Conread position:
               6-296
               

               Cow position:
               chr3:34026771-34026480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               135, 122
               

               Conread position:
               6-296
               

               Cow position:
               chr3:37008962-37008662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               176, 0
               

               Conread position:
               6-296
               

               Cow position:
               chr3:39857770-39858063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               180, 103
               

               Conread position:
               6-296
               

               Cow position:
               chr3:45215007-45214723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               233, 41
               

               Conread position:
               6-296
               

               Cow position:
               chr3:46506567-46506863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               163, 115
               

               Conread position:
               6-296
               

               Cow position:
               chr3:50922194-50922487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               210, 43
               

               Conread position:
               6-296
               

               Cow position:
               chr3:63945349-63945058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               62, 116
               

               Conread position:
               6-296
               

               Cow position:
               chr3:65989700-65989996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               46, 123
               

               Conread position:
               6-296
               

               Cow position:
               chr3:68042818-68042530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               191, 132
               

               Conread position:
               6-296
               

               Cow position:
               chr3:68146197-68145925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               83, 54
               

               Conread position:
               6-296
               

               Cow position:
               chr3:69930043-69929748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               181, 0
               

               Conread position:
               6-296
               

               Cow position:
               chr3:72169093-72168800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               179, 73
               

               Conread position:
               6-296
               

               Cow position:
               chr3:77565107-77565391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               124, 134
               

               Conread position:
               6-296
               

               Cow position:
               chr3:78023652-78023357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               181, 0
               

               Conread position:
               6-296
               

               Cow position:
               chr3:78110740-78111032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               164, 96
               

               Conread position:
               6-296
               

               Cow position:
               chr3:81102127-81102421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               181, 252
               

               Conread position:
               6-297
               

               Cow position:
               chr3:14456276-14455984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               135, 70
               

               Conread position:
               6-297
               

               Cow position:
               chr3:42423708-42423415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               37, 191
               

               Conread position:
               6-298
               

               Cow position:
               chr3:3301753-3302047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               211, 247
               

               Conread position:
               6-298
               

               Cow position:
               chr3:7360193-7359897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               211, 288
               

               Conread position:
               6-298
               

               Cow position:
               chr3:31078568-31078281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               135, 122
               

               Conread position:
               6-298
               

               Cow position:
               chr3:36121970-36122266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               195, 288
               

               Conread position:
               6-298
               

               Cow position:
               chr3:40194666-40194962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               208, 198
               

               Conread position:
               6-298
               

               Cow position:
               chr3:68696181-68695886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               180, 120
               

               Conread position:
               6-298
               

               Cow position:
               chr3:72174220-72173924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               180, 288
               

               Conread position:
               6-298
               

               Cow position:
               chr3:73393652-73393363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               208, 132
               

               Conread position:
               6-300
               

               Cow position:
               chr3:48530265-48530569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 98
               

               Conread position:
               6-303
               

               Cow position:
               chr3:14864668-14864968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               227, 25
               

               Conread position:
               6-304
               

               Cow position:
               chr3:4662981-4663268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               233, 70
               

               Conread position:
               6-304
               

               Cow position:
               chr3:5064720-5065024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               216, 0
               

               Conread position:
               6-304
               

               Cow position:
               chr3:7280453-7280759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               135, 122
               

               Conread position:
               6-304
               

               Cow position:
               chr3:10017741-10018047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               191, 0
               

               Conread position:
               6-304
               

               Cow position:
               chr3:11333686-11333385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               217
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               180, 34
               

               Conread position:
               6-304
               

               Cow position:
               chr3:11385300-11385606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               208, 198
               

               Conread position:
               6-304
               

               Cow position:
               chr3:13274751-13274445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               135, 122
               

               Conread position:
               6-304
               

               Cow position:
               chr3:13291510-13291817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               6-304
               

               Cow position:
               chr3:18715857-18715553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               209
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               135, 126
               

               Conread position:
               6-304
               

               Cow position:
               chr3:21178461-21178156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               135, 122
               

               Conread position:
               6-304
               

               Cow position:
               chr3:22919316-22919620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               135, 115
               

               Conread position:
               6-304
               

               Cow position:
               chr3:23203877-23203574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               216, 132
               

               Conread position:
               6-304
               

               Cow position:
               chr3:23286182-23285879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               135, 70
               

               Conread position:
               6-304
               

               Cow position:
               chr3:24433172-24433476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               135, 126
               

               Conread position:
               6-304
               

               Cow position:
               chr3:24442311-24442007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               135, 126
               

               Conread position:
               6-304
               

               Cow position:
               chr3:24852960-24852659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               214
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               211, 246
               

               Conread position:
               6-304
               

               Cow position:
               chr3:24887379-24887687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               135, 13
               

               Conread position:
               6-304
               

               Cow position:
               chr3:27242888-27242594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               180, 61
               

               Conread position:
               6-304
               

               Cow position:
               chr3:31422319-31422025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               135, 125
               

               Conread position:
               6-304
               

               Cow position:
               chr3:33124465-33124160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               181, 106
               

               Conread position:
               6-304
               

               Cow position:
               chr3:38870361-38870663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               240, 0
               

               Conread position:
               6-304
               

               Cow position:
               chr3:42452137-42452442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               6-304
               

               Cow position:
               chr3:45026151-45025846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               135, 84
               

               Conread position:
               6-304
               

               Cow position:
               chr3:46341090-46341390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               211, 94
               

               Conread position:
               6-304
               

               Cow position:
               chr3:47272084-47271773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               164, 70
               

               Conread position:
               6-304
               

               Cow position:
               chr3:49416056-49415752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               135, 115
               

               Conread position:
               6-304
               

               Cow position:
               chr3:53519574-53519873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               110, 70
               

               Conread position:
               6-304
               

               Cow position:
               chr3:54653364-54653058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               135, 122
               

               Conread position:
               6-304
               

               Cow position:
               chr3:55058086-55058389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               135, 115
               

               Conread position:
               6-304
               

               Cow position:
               chr3:59865275-59865580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               181, 132
               

               Conread position:
               6-304
               

               Cow position:
               chr3:60092951-60092649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               135, 64
               

               Conread position:
               6-304
               

               Cow position:
               chr3:73211611-73211917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               181, 0
               

               Conread position:
               6-304
               

               Cow position:
               chr3:77472205-77471900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               191, 0
               

               Conread position:
               6-304
               

               Cow position:
               chr3:79902130-79902434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 0
               

               Conread position:
               6-306
               

               Cow position:
               chr3:364581-364282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               175, 34
               

               Conread position:
               6-306
               

               Cow position:
               chr3:31206500-31206803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 42
               

               Conread position:
               6-306
               

               Cow position:
               chr3:80655089-80655380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               121, 70
               

               Conread position:
               6-308
               

               Cow position:
               chr3:72776867-72777180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 222
               

               Conread position:
               6-309
               

               Cow position:
               chr3:79592261-79591949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 75
               

               Conread position:
               6-310
               

               Cow position:
               chr3:4457447-4457139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               226
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               180, 33
               

               Conread position:
               6-310
               

               Cow position:
               chr3:8716874-8717186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 120
               

               Conread position:
               6-310
               

               Cow position:
               chr3:20129574-20129879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 54
               

               Conread position:
               6-310
               

               Cow position:
               chr3:31419323-31419636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 199
               

               Conread position:
               6-310
               

               Cow position:
               chr3:35299301-35299600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               248, 188
               

               Conread position:
               6-310
               

               Cow position:
               chr3:48567038-48566734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               187, 71
               

               Conread position:
               6-311
               

               Cow position:
               chr3:2630422-2630729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               44, 76
               

               Conread position:
               6-311
               

               Cow position:
               chr3:77188076-77188372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               233, 70
               

               Conread position:
               6-313
               

               Cow position:
               chr3:69962083-69961779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 84
               

               Conread position:
               6-314
               

               Cow position:
               chr3:16157312-16157618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               180, 70
               

               Conread position:
               6-314
               

               Cow position:
               chr3:31298530-31298215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               189, 79
               

               Conread position:
               6-314
               

               Cow position:
               chr3:54434601-54434912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               83, 12
               

               Conread position:
               6-314
               

               Cow position:
               chr3:61678316-61678632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 204
               

               Conread position:
               6-315
               

               Cow position:
               chr3:66978470-66978775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 233
               

               Conread position:
               6-315
               

               Cow position:
               chr3:76173035-76172725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               180, 149
               

               Conread position:
               6-315
               

               Cow position:
               chr3:79220477-79220793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 20
               

               Conread position:
               6-316
               

               Cow position:
               chr3:11986958-11987267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               223
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               233, 81
               

               Conread position:
               6-316
               

               Cow position:
               chr3:66374956-66375258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               233, 69
               

               Conread position:
               6-317
               

               Cow position:
               chr3:1034883-1035202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               195, 0
               

               Conread position:
               6-317
               

               Cow position:
               chr3:2674656-2674969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 217
               

               Conread position:
               6-317
               

               Cow position:
               chr3:4331984-4332307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               22, 190
               

               Conread position:
               6-317
               

               Cow position:
               chr3:15057983-15057668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               83, 210
               

               Conread position:
               6-317
               

               Cow position:
               chr3:17695376-17695064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 70
               

               Conread position:
               6-317
               

               Cow position:
               chr3:22089655-22089336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               211, 162
               

               Conread position:
               6-317
               

               Cow position:
               chr3:22872425-22872106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 0
               

               Conread position:
               6-317
               

               Cow position:
               chr3:42177783-42178099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               223
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               48, 124
               

               Conread position:
               6-317
               

               Cow position:
               chr3:56158793-56159109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               128, 115
               

               Conread position:
               6-317
               

               Cow position:
               chr3:65968788-65969102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               233
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               55, 25
               

               Conread position:
               6-317
               

               Cow position:
               chr3:67929644-67929321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 150
               

               Conread position:
               6-317
               

               Cow position:
               chr3:74088534-74088229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               234
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               180, 102
               

               Conread position:
               6-317
               

               Cow position:
               chr3:80581304-80581605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 11
               

               Conread position:
               6-318
               

               Cow position:
               chr3:53221655-53221955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               224
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               248, 61
               

               Conread position:
               6-318
               

               Cow position:
               chr3:72675715-72676034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 37
               

               Conread position:
               6-320
               

               Cow position:
               chr3:49650008-49650330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 43
               

               Conread position:
               6-320
               

               Cow position:
               chr3:54959825-54960132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               232
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               233, 41
               

               Conread position:
               6-321
               

               Cow position:
               chr3:3164865-3164550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 42
               

               Conread position:
               6-321
               

               Cow position:
               chr3:26920526-26920852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 46
               

               Conread position:
               6-321
               

               Cow position:
               chr3:38346830-38347138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               227
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               203, 82
               

               Conread position:
               6-321
               

               Cow position:
               chr3:48269490-48269805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 238
               

               Conread position:
               6-321
               

               Cow position:
               chr3:49382579-49382892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 198
               

               Conread position:
               6-321
               

               Cow position:
               chr3:49454859-49455183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               6-321
               

               Cow position:
               chr3:50614272-50614582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               284, 101
               

               Conread position:
               6-321
               

               Cow position:
               chr3:59588146-59588464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 263
               

               Conread position:
               6-321
               

               Cow position:
               chr3:64716650-64716968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               180, 93
               

               Conread position:
               6-321
               

               Cow position:
               chr3:69849875-69849561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               289, 190
               

               Conread position:
               6-321
               

               Cow position:
               chr3:75727962-75727638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               172, 253
               

               Conread position:
               6-322
               

               Cow position:
               chr3:1830938-1830629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               91, 150
               

               Conread position:
               6-322
               

               Cow position:
               chr3:3032028-3032351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               239
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               172, 69
               

               Conread position:
               6-322
               

               Cow position:
               chr3:30359006-30358688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               233, 17
               

               Conread position:
               6-322
               

               Cow position:
               chr3:68586668-68586966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               233
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               290, 70
               

               Conread position:
               6-324
               

               Cow position:
               chr3:25690420-25690737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               180, 66
               

               Conread position:
               6-324
               

               Cow position:
               chr3:61539424-61539750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 71
               

               Conread position:
               6-325
               

               Cow position:
               chr3:2922425-2922753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               184, 0
               

               Conread position:
               6-325
               

               Cow position:
               chr3:6853876-6853556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 118
               

               Conread position:
               6-325
               

               Cow position:
               chr3:9663560-9663222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               207, 287
               

               Conread position:
               6-325
               

               Cow position:
               chr3:14466077-14465765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 148
               

               Conread position:
               6-325
               

               Cow position:
               chr3:39328039-39328344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               243, 115
               

               Conread position:
               6-325
               

               Cow position:
               chr3:41367356-41367037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 114
               

               Conread position:
               6-325
               

               Cow position:
               chr3:48811358-48811044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               175, 139
               

               Conread position:
               6-325
               

               Cow position:
               chr3:53593072-53592747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 70
               

               Conread position:
               6-325
               

               Cow position:
               chr3:56582474-56582785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               222
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               290, 43
               

               Conread position:
               6-326
               

               Cow position:
               chr3:27285856-27286181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 60
               

               Conread position:
               6-326
               

               Cow position:
               chr3:27544707-27544383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 71
               

               Conread position:
               6-326
               

               Cow position:
               chr3:65413660-65413330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               82, 127
               

               Conread position:
               6-327
               

               Cow position:
               chr3:4461861-4461540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               286, 55
               

               Conread position:
               6-327
               

               Cow position:
               chr3:50123876-50123573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               237, 70
               

               Conread position:
               6-328
               

               Cow position:
               chr3:13899826-13899495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 323
               

               Conread position:
               6-328
               

               Cow position:
               chr3:48252522-48252833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               237
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               27, 132
               

               Conread position:
               6-328
               

               Cow position:
               chr3:70566111-70565787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 316
               

               Conread position:
               6-330
               

               Cow position:
               chr3:28675616-28675944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 0
               

               Conread position:
               6-330
               

               Cow position:
               chr3:50762747-50763077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               84, 67
               

               Conread position:
               6-330
               

               Cow position:
               chr3:61278541-61278868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               59, 20
               

               Conread position:
               6-339
               

               Cow position:
               chr3:77226949-77227285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               237
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               190, 63
               

               Conread position:
               6-349
               

               Cow position:
               chr3:15662071-15661728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 70
               

               Conread position:
               6-356
               

               Cow position:
               chr3:44535133-44534779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               95, 111
               

               Conread position:
               6-363
               

               Cow position:
               chr3:74849411-74849065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               239
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               320, 115
               

               Conread position:
               6-373
               

               Cow position:
               chr3:75479645-75480001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               290, 40
               

               Conread position:
               6-375
               

               Cow position:
               chr3:57577327-57577697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               264
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               180, 46
               

               Conread position:
               6-375
               

               Cow position:
               chr3:59473743-59474122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               197, 100
               

               Conread position:
               6-375
               

               Cow position:
               chr3:59514750-59515104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               291, 43
               

               Conread position:
               6-375
               

               Cow position:
               chr3:80053906-80053541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               266
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               233, 18
               

               Conread position:
               6-379
               

               Cow position:
               chr3:18066761-18067145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 0
               

               Conread position:
               6-379
               

               Cow position:
               chr3:34270561-34270923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               268
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               291, 70
               

               Conread position:
               6-379
               

               Cow position:
               chr3:49230642-49231019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               262
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               179, 105
               

               Conread position:
               6-380
               

               Cow position:
               chr3:5365312-5365684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 178
               

               Conread position:
               6-380
               

               Cow position:
               chr3:37041067-37041426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               290, 57
               

               Conread position:
               6-380
               

               Cow position:
               chr3:37599789-37599421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               261
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               283, 217
               

               Conread position:
               6-380
               

               Cow position:
               chr3:66610211-66609837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 178
               

               Conread position:
               6-380
               

               Cow position:
               chr3:72390710-72391089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               263
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               83, 107
               

               Conread position:
               6-421
               

               Cow position:
               chr3:33698352-33698777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 70
               

               Conread position:
               6-485
               

               Cow position:
               chr3:7408111-7408611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               325
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               180, 17
               

               Conread position:
               6-593
               

               Cow position:
               chr3:14614024-14614610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               588
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               7-195
               

               Cow position:
               chr3:66014033-66014222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               7-212
               

               Cow position:
               chr3:13326536-13326333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               77, 70
               

               Conread position:
               7-214
               

               Cow position:
               chr3:40630125-40629915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               7-242
               

               Cow position:
               chr3:62824855-62824620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-242
               

               Cow position:
               chr3:82473679-82473920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               7-243
               

               Cow position:
               chr3:19109367-19109600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               75, 27
               

               Conread position:
               7-244
               

               Cow position:
               chr3:9002822-9003072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               61, 52
               

               Conread position:
               7-244
               

               Cow position:
               chr3:43105200-43105437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               86, 193
               

               Conread position:
               7-244
               

               Cow position:
               chr3:58077813-58077587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               7-273
               

               Cow position:
               chr3:24639218-24639487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               179, 114
               

               Conread position:
               7-285
               

               Cow position:
               chr3:48362711-48362990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               179, 148
               

               Conread position:
               7-288
               

               Cow position:
               chr3:20663910-20663624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               7-296
               

               Cow position:
               chr3:3836812-3836512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               22, 215
               

               Conread position:
               7-296
               

               Cow position:
               chr3:7475793-7475504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               24, 12
               

               Conread position:
               7-296
               

               Cow position:
               chr3:56697567-56697861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               134, 121
               

               Conread position:
               7-296
               

               Cow position:
               chr3:67022192-67022482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               28, 12
               

               Conread position:
               7-309
               

               Cow position:
               chr3:15954448-15954154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               288, 36
               

               Conread position:
               7-314
               

               Cow position:
               chr3:15387833-15388150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               90, 285
               

               Conread position:
               7-322
               

               Cow position:
               chr3:30179712-30180027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 83
               

               Conread position:
               7-326
               

               Cow position:
               chr3:31903482-31903164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               24, 116
               

               Conread position:
               7-379
               

               Cow position:
               chr3:79292456-79292830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 91
               

               Conread position:
               8-211
               

               Cow position:
               chr3:20997343-20997148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               8-242
               

               Cow position:
               chr3:41947485-41947255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               189, 52
               

               Conread position:
               8-298
               

               Cow position:
               chr3:69486334-69486628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               206, 196
               

               Conread position:
               8-306
               

               Cow position:
               chr3:53384654-53384357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 176
               

               Conread position:
               9-107
               

               Cow position:
               chr3:20488614-20488712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-114
               

               Cow position:
               chr3:29240437-29240543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               81, 43
               

               Conread position:
               9-128
               

               Cow position:
               chr3:58835439-58835320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-132
               

               Cow position:
               chr3:39112381-39112504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-185
               

               Cow position:
               chr3:13513104-13512931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               9-186
               

               Cow position:
               chr3:41679923-41680102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               9-194
               

               Cow position:
               chr3:46007750-46007935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               86, 51
               

               Conread position:
               9-195
               

               Cow position:
               chr3:39232510-39232696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-198
               

               Cow position:
               chr3:21112990-21112803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               9-200
               

               Cow position:
               chr3:73926535-73926348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               9-206
               

               Cow position:
               chr3:2594754-2594955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               160, 181
               

               Conread position:
               9-208
               

               Cow position:
               chr3:10411116-10410918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               9-208
               

               Cow position:
               chr3:15530432-15530626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               9-208
               

               Cow position:
               chr3:28597235-28597040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               9-208
               

               Cow position:
               chr3:29391315-29391121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               9-208
               

               Cow position:
               chr3:53407623-53407424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-208
               

               Cow position:
               chr3:68704990-68704791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               132, 123
               

               Conread position:
               9-212
               

               Cow position:
               chr3:44335185-44335386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               195, 0
               

               Conread position:
               9-228
               

               Cow position:
               chr3:10288071-10287848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               80, 20
               

               Conread position:
               9-243
               

               Cow position:
               chr3:70753998-70754233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               113, 67
               

               Conread position:
               9-244
               

               Cow position:
               chr3:2627950-2628183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               55, 35
               

               Conread position:
               9-244
               

               Cow position:
               chr3:15557591-15557833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               75, 208
               

               Conread position:
               9-244
               

               Cow position:
               chr3:15571287-15571519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               214, 159
               

               Conread position:
               9-266
               

               Cow position:
               chr3:3289419-3289676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               179, 192
               

               Conread position:
               9-272
               

               Cow position:
               chr3:10244458-10244726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               178, 250
               

               Conread position:
               9-272
               

               Cow position:
               chr3:67782995-67782732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               132, 67
               

               Conread position:
               9-287
               

               Cow position:
               chr3:42489685-42489398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               89, 34
               

               Conread position:
               9-287
               

               Cow position:
               chr3:48370761-48371043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               177, 0
               

               Conread position:
               9-288
               

               Cow position:
               chr3:51012908-51012623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               9-289
               

               Cow position:
               chr3:18245786-18245509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               127, 102
               

               Conread position:
               9-294
               

               Cow position:
               chr3:45523895-45524181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 73
               

               Conread position:
               9-296
               

               Cow position:
               chr3:11026556-11026838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               230, 171
               

               Conread position:
               9-296
               

               Cow position:
               chr3:31056372-31056082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               177, 257
               

               Conread position:
               9-296
               

               Cow position:
               chr3:47978333-47978626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               181, 0
               

               Conread position:
               9-296
               

               Cow position:
               chr3:55085560-55085260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               9-296
               

               Cow position:
               chr3:55190116-55189840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               213
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               5, 31
               

               Conread position:
               9-296
               

               Cow position:
               chr3:75038043-75037751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               161, 184
               

               Conread position:
               9-298
               

               Cow position:
               chr3:14830460-14830172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               214, 169
               

               Conread position:
               9-304
               

               Cow position:
               chr3:30567913-30568216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               132, 119
               

               Conread position:
               9-304
               

               Cow position:
               chr3:40827484-40827787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               213
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               132, 119
               

               Conread position:
               9-304
               

               Cow position:
               chr3:68878080-68877780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               132, 123
               

               Conread position:
               9-310
               

               Cow position:
               chr3:14263025-14263328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               240, 67
               

               Conread position:
               9-315
               

               Cow position:
               chr3:59648893-59649194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               244, 81
               

               Conread position:
               9-316
               

               Cow position:
               chr3:36570409-36570108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               10, 28
               

               Conread position:
               9-317
               

               Cow position:
               chr3:59630870-59630561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 205
               

               Conread position:
               9-327
               

               Cow position:
               chr3:8753094-8753409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               160, 111
               

               Conread position:
               9-473
               

               Cow position:
               chr3:57554215-57553737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 58
               

               Conread position:
               10-167
               

               Cow position:
               chr3:17899455-17899608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               10-195
               

               Cow position:
               chr3:14438189-14438005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               131, 30
               

               Conread position:
               10-198
               

               Cow position:
               chr3:20780247-20780057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               152, 80
               

               Conread position:
               10-200
               

               Cow position:
               chr3:3884395-3884206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               10-200
               

               Cow position:
               chr3:5394339-5394149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               120, 130
               

               Conread position:
               10-212
               

               Cow position:
               chr3:24166195-24166389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               10-212
               

               Cow position:
               chr3:81057727-81057527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               194, 0
               

               Conread position:
               10-241
               

               Cow position:
               chr3:36230195-36230425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               229, 194
               

               Conread position:
               10-298
               

               Cow position:
               chr3:31147273-31147565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               191, 284
               

               Conread position:
               10-311
               

               Cow position:
               chr3:13352991-13353296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               199, 111
               

               Conread position:
               10-311
               

               Cow position:
               chr3:50768306-50768617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               57, 115
               

               Conread position:
               10-320
               

               Cow position:
               chr3:43528606-43528299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               286, 243
               

               Conread position:
               10-367
               

               Cow position:
               chr3:46350278-46350665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               263
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               55, 377
               

               Conread position:
               11-212
               

               Cow position:
               chr3:49564817-49565016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               73, 66
               

               Conread position:
               11-212
               

               Cow position:
               chr3:83479208-83479407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               193, 0
               

               Conread position:
               11-296
               

               Cow position:
               chr3:36670790-36670504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               49, 231
               

               Conread position:
               11-303
               

               Cow position:
               chr3:53573118-53572827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               232, 185
               

               Conread position:
               12-107
               

               Cow position:
               chr3:57743356-57743454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               12-107
               

               Cow position:
               chr3:73459856-73459951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-124
               

               Cow position:
               chr3:34973389-34973277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-125
               

               Cow position:
               chr3:33021275-33021388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-125
               

               Cow position:
               chr3:65179175-65179289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               12-127
               

               Cow position:
               chr3:75997085-75996970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-128
               

               Cow position:
               chr3:6068407-6068523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-128
               

               Cow position:
               chr3:10244950-10245066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-128
               

               Cow position:
               chr3:11123078-11123194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-128
               

               Cow position:
               chr3:34151415-34151299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-128
               

               Cow position:
               chr3:35110028-35110144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-128
               

               Cow position:
               chr3:69273697-69273813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-129
               

               Cow position:
               chr3:73513002-73512885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-130
               

               Cow position:
               chr3:51256740-51256858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-134
               

               Cow position:
               chr3:74110027-74110151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               12-135
               

               Cow position:
               chr3:73930767-73930648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               12-158
               

               Cow position:
               chr3:24934992-24935131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               67, 18
               

               Conread position:
               12-161
               

               Cow position:
               chr3:74847116-74846971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               12-164
               

               Cow position:
               chr3:30355858-30356009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               12-165
               

               Cow position:
               chr3:34041197-34041350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-165
               

               Cow position:
               chr3:49132616-49132469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               12-165
               

               Cow position:
               chr3:56301993-56301837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               83, 113
               

               Conread position:
               12-167
               

               Cow position:
               chr3:12932568-12932723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-169
               

               Cow position:
               chr3:22196651-22196494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-176
               

               Cow position:
               chr3:37646696-37646864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               12-176
               

               Cow position:
               chr3:67388812-67388976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-180
               

               Cow position:
               chr3:69448063-69447896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               12-183
               

               Cow position:
               chr3:18758604-18758433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 87
               

               Conread position:
               12-184
               

               Cow position:
               chr3:26832993-26832831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               12-185
               

               Cow position:
               chr3:26980989-26981157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               12-185
               

               Cow position:
               chr3:76155349-76155517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               12-185
               

               Cow position:
               chr3:78559734-78559561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-186
               

               Cow position:
               chr3:64015369-64015195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-186
               

               Cow position:
               chr3:78520847-78521021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-192
               

               Cow position:
               chr3:37982488-37982307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               12-192
               

               Cow position:
               chr3:62624000-62623823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               12-193
               

               Cow position:
               chr3:24344062-24343881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-194
               

               Cow position:
               chr3:43634050-43633868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:1760292-1760475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:2573329-2573512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:3596109-3595926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:6193116-6192933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:7767715-7767898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:13195439-13195622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:14144779-14144596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:15233361-15233179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:17331401-17331584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               149
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:19977821-19977638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:20388669-20388486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:20804868-20805051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:21155238-21155421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:24763675-24763492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:26892292-26892475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:27674233-27674051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:28933705-28933888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:29461383-29461200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:30609666-30609483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:30989298-30989115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:32356552-32356734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:35433169-35433351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:35805614-35805797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:41569158-41568975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:45749056-45749239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:47720048-47720231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:47758510-47758693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:48043081-48043264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:49530985-49530802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:49930444-49930261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:49948591-49948774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:51520265-51520082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:52011571-52011754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               108, 127
               

               Conread position:
               12-195
               

               Cow position:
               chr3:52045218-52045035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:52149483-52149300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:56484453-56484270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:58026883-58026700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:58337101-58337284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:58912839-58913022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:67264589-67264772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:68631721-68631538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:70701630-70701813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 22
               

               Conread position:
               12-195
               

               Cow position:
               chr3:76865233-76865416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-195
               

               Cow position:
               chr3:80741672-80741855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-197
               

               Cow position:
               chr3:49674430-49674612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               129, 61
               

               Conread position:
               12-198
               

               Cow position:
               chr3:22882411-22882231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               12-200
               

               Cow position:
               chr3:4289176-4289363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               12-200
               

               Cow position:
               chr3:5475335-5475523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-200
               

               Cow position:
               chr3:12982086-12981899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               12-200
               

               Cow position:
               chr3:12986552-12986365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               12-200
               

               Cow position:
               chr3:13722050-13721863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               12-200
               

               Cow position:
               chr3:18111351-18111163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-200
               

               Cow position:
               chr3:20476300-20476488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-200
               

               Cow position:
               chr3:21594083-21594271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-200
               

               Cow position:
               chr3:30753384-30753572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-200
               

               Cow position:
               chr3:30859400-30859588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-200
               

               Cow position:
               chr3:34503337-34503149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-200
               

               Cow position:
               chr3:36417541-36417729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-200
               

               Cow position:
               chr3:42507410-42507222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-200
               

               Cow position:
               chr3:45098041-45098229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-200
               

               Cow position:
               chr3:50217790-50217978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-200
               

               Cow position:
               chr3:51242501-51242313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-200
               

               Cow position:
               chr3:52225221-52225409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-200
               

               Cow position:
               chr3:53787594-53787406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-200
               

               Cow position:
               chr3:55246251-55246439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-200
               

               Cow position:
               chr3:61200591-61200779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-200
               

               Cow position:
               chr3:63177145-63177332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               84, 117
               

               Conread position:
               12-200
               

               Cow position:
               chr3:64198114-64198301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               12-200
               

               Cow position:
               chr3:68259519-68259710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 119
               

               Conread position:
               12-200
               

               Cow position:
               chr3:84598420-84598232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-202
               

               Cow position:
               chr3:55010519-55010333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               157, 65
               

               Conread position:
               12-205
               

               Cow position:
               chr3:47077811-47077614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               157, 178
               

               Conread position:
               12-206
               

               Cow position:
               chr3:20378922-20378733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               70, 65
               

               Conread position:
               12-206
               

               Cow position:
               chr3:29560284-29560086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               157, 178
               

               Conread position:
               12-206
               

               Cow position:
               chr3:34086425-34086236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               12-206
               

               Cow position:
               chr3:36374297-36374492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               163, 175
               

               Conread position:
               12-206
               

               Cow position:
               chr3:37020443-37020250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               12-206
               

               Cow position:
               chr3:38748182-38748381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               81, 179
               

               Conread position:
               12-206
               

               Cow position:
               chr3:41206770-41206572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               157, 178
               

               Conread position:
               12-206
               

               Cow position:
               chr3:60701458-60701263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               110, 70
               

               Conread position:
               12-206
               

               Cow position:
               chr3:66887391-66887193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               157, 178
               

               Conread position:
               12-207
               

               Cow position:
               chr3:2833737-2833542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-208
               

               Cow position:
               chr3:4160971-4160775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               129, 114
               

               Conread position:
               12-208
               

               Cow position:
               chr3:10050701-10050902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               12-208
               

               Cow position:
               chr3:18179383-18179578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               12-208
               

               Cow position:
               chr3:46128337-46128137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               157, 178
               

               Conread position:
               12-208
               

               Cow position:
               chr3:66136487-66136290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               72, 111
               

               Conread position:
               12-209
               

               Cow position:
               chr3:40520138-40519938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               157, 177
               

               Conread position:
               12-211
               

               Cow position:
               chr3:6799369-6799168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               56, 52
               

               Conread position:
               12-211
               

               Cow position:
               chr3:7245307-7245109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               108, 127
               

               Conread position:
               12-212
               

               Cow position:
               chr3:470303-470105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:579981-580179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:859368-859566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:1438364-1438562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:1622902-1623100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:2874869-2874671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:3553181-3553379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:3618602-3618800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:5117063-5117261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:5361989-5361791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:5988761-5988569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:6262699-6262897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:6714909-6715107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               189, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:6884947-6885145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:7155005-7154807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:8331078-8331276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:9435595-9435793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:10448669-10448471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:11418348-11418546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:13275417-13275219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:14213184-14213382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:14680883-14681081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:14863572-14863374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:14923451-14923650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               109, 193
               

               Conread position:
               12-212
               

               Cow position:
               chr3:15417268-15417466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:16619953-16619754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               7, 193
               

               Conread position:
               12-212
               

               Cow position:
               chr3:17263190-17262992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:18863239-18863437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:19234575-19234773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               70, 64
               

               Conread position:
               12-212
               

               Cow position:
               chr3:19827661-19827466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:19881851-19882049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:20796094-20796292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:20843768-20843570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:23598237-23598039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:24557774-24557576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:28668887-28668689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:28748016-28748216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               152, 194
               

               Conread position:
               12-212
               

               Cow position:
               chr3:28764621-28764423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:30328868-30328670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:32411765-32411567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:35342065-35341867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:36013959-36014157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:36802422-36802224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:37150605-37150409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:37894625-37894823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               118, 134
               

               Conread position:
               12-212
               

               Cow position:
               chr3:39921147-39920949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:40051946-40052143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               70, 65
               

               Conread position:
               12-212
               

               Cow position:
               chr3:40205401-40205203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:41018509-41018311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:41396169-41396367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:42277452-42277255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:42885314-42885512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:42976514-42976316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:43524938-43524740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:44352363-44352561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:45293871-45294069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:45986162-45986360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               70, 63
               

               Conread position:
               12-212
               

               Cow position:
               chr3:46261171-46261369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:46683635-46683832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               72, 64
               

               Conread position:
               12-212
               

               Cow position:
               chr3:47106721-47106919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:47233598-47233400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:48059789-48059591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               69, 65
               

               Conread position:
               12-212
               

               Cow position:
               chr3:49604645-49604448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:50941211-50941013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               190, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:51666518-51666716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:51857652-51857850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:51869861-51870059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:54573137-54572939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:55837643-55837835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               108, 127
               

               Conread position:
               12-212
               

               Cow position:
               chr3:59748020-59747822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:60514308-60514110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:65474229-65474427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:65672540-65672738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               190, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:68869953-68869756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:68888771-68888573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:70731101-70731299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:74061269-74061467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:75265140-75264942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-212
               

               Cow position:
               chr3:77696699-77696504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               69, 45
               

               Conread position:
               12-212
               

               Cow position:
               chr3:79668912-79669110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-215
               

               Cow position:
               chr3:15089567-15089773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               157, 202
               

               Conread position:
               12-226
               

               Cow position:
               chr3:55417534-55417322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               202, 192
               

               Conread position:
               12-227
               

               Cow position:
               chr3:18052120-18051907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               202, 192
               

               Conread position:
               12-227
               

               Cow position:
               chr3:49975728-49975515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-228
               

               Cow position:
               chr3:30815969-30816183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               202, 192
               

               Conread position:
               12-229
               

               Cow position:
               chr3:25673491-25673292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               12-237
               

               Cow position:
               chr3:38018067-38017843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               107, 70
               

               Conread position:
               12-241
               

               Cow position:
               chr3:12671062-12670832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               9, 183
               

               Conread position:
               12-241
               

               Cow position:
               chr3:79074952-79074726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               72, 65
               

               Conread position:
               12-242
               

               Cow position:
               chr3:33633253-33633027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               12-242
               

               Cow position:
               chr3:59608141-59608371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               20, 66
               

               Conread position:
               12-242
               

               Cow position:
               chr3:71257576-71257346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               70, 205
               

               Conread position:
               12-243
               

               Cow position:
               chr3:24531472-24531696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               212, 49
               

               Conread position:
               12-243
               

               Cow position:
               chr3:38252628-38252856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               12-243
               

               Cow position:
               chr3:54340779-54340546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               12-243
               

               Cow position:
               chr3:58286264-58286034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               17, 63
               

               Conread position:
               12-244
               

               Cow position:
               chr3:55107475-55107240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               116, 78
               

               Conread position:
               12-244
               

               Cow position:
               chr3:55301117-55300886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               12-248
               

               Cow position:
               chr3:21302798-21302563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               109, 174
               

               Conread position:
               12-251
               

               Cow position:
               chr3:39554680-39554449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               152, 40
               

               Conread position:
               12-251
               

               Cow position:
               chr3:82618024-82618259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               176, 142
               

               Conread position:
               12-260
               

               Cow position:
               chr3:60389278-60389514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               12-266
               

               Cow position:
               chr3:68514916-68514672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               191
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               12-267
               

               Cow position:
               chr3:51014203-51013945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               205, 126
               

               Conread position:
               12-272
               

               Cow position:
               chr3:3651430-3651162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               207, 109
               

               Conread position:
               12-272
               

               Cow position:
               chr3:17865228-17865485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               129, 116
               

               Conread position:
               12-272
               

               Cow position:
               chr3:24939587-24939332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               242, 15
               

               Conread position:
               12-273
               

               Cow position:
               chr3:16752614-16752360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               198
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               237, 108
               

               Conread position:
               12-273
               

               Cow position:
               chr3:79905279-79905024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               181, 109
               

               Conread position:
               12-273
               

               Cow position:
               chr3:80818369-80818622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               12-275
               

               Cow position:
               chr3:20225789-20226053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               214, 188
               

               Conread position:
               12-282
               

               Cow position:
               chr3:18895415-18895691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               129, 116
               

               Conread position:
               12-286
               

               Cow position:
               chr3:5851294-5851016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               167, 114
               

               Conread position:
               12-286
               

               Cow position:
               chr3:72131668-72131388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               70, 77
               

               Conread position:
               12-287
               

               Cow position:
               chr3:303023-303302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               12-287
               

               Cow position:
               chr3:7959979-7959703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               69, 65
               

               Conread position:
               12-287
               

               Cow position:
               chr3:18874882-18874604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               157, 42
               

               Conread position:
               12-287
               

               Cow position:
               chr3:36861309-36861029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               157, 178
               

               Conread position:
               12-287
               

               Cow position:
               chr3:49286963-49287243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               178, 0
               

               Conread position:
               12-288
               

               Cow position:
               chr3:8557148-8556876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               238, 167
               

               Conread position:
               12-288
               

               Cow position:
               chr3:20746947-20746673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               48, 182
               

               Conread position:
               12-288
               

               Cow position:
               chr3:59117972-59117698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               129, 116
               

               Conread position:
               12-288
               

               Cow position:
               chr3:77276771-77276498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               197
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               12-288
               

               Cow position:
               chr3:81371289-81371554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               201
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               172, 0
               

               Conread position:
               12-288
               

               Cow position:
               chr3:83884316-83884599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               129, 116
               

               Conread position:
               12-291
               

               Cow position:
               chr3:35919361-35919645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               157, 178
               

               Conread position:
               12-291
               

               Cow position:
               chr3:53935095-53935380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 128
               

               Conread position:
               12-296
               

               Cow position:
               chr3:997587-997878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               62, 232
               

               Conread position:
               12-296
               

               Cow position:
               chr3:16004351-16004073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               170, 52
               

               Conread position:
               12-296
               

               Cow position:
               chr3:18393749-18393471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               86, 11
               

               Conread position:
               12-296
               

               Cow position:
               chr3:21341330-21341045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 100
               

               Conread position:
               12-296
               

               Cow position:
               chr3:65771681-65771391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               12-296
               

               Cow position:
               chr3:78782607-78782880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               109, 134
               

               Conread position:
               12-297
               

               Cow position:
               chr3:1133459-1133173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               209, 64
               

               Conread position:
               12-297
               

               Cow position:
               chr3:20137220-20136926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               174, 287
               

               Conread position:
               12-297
               

               Cow position:
               chr3:36174443-36174151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               89, 256
               

               Conread position:
               12-298
               

               Cow position:
               chr3:13361248-13361538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               176, 202
               

               Conread position:
               12-298
               

               Cow position:
               chr3:14889101-14889391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               157, 178
               

               Conread position:
               12-298
               

               Cow position:
               chr3:15687888-15687602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               70, 65
               

               Conread position:
               12-298
               

               Cow position:
               chr3:16226674-16226958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               227, 99
               

               Conread position:
               12-298
               

               Cow position:
               chr3:19884255-19884544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               157, 178
               

               Conread position:
               12-298
               

               Cow position:
               chr3:43463657-43463368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               112, 281
               

               Conread position:
               12-298
               

               Cow position:
               chr3:53879464-53879174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               72, 65
               

               Conread position:
               12-298
               

               Cow position:
               chr3:69345184-69344899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               174, 71
               

               Conread position:
               12-304
               

               Cow position:
               chr3:16380944-16380645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               205, 246
               

               Conread position:
               12-304
               

               Cow position:
               chr3:62541947-62542240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               189, 284
               

               Conread position:
               12-304
               

               Cow position:
               chr3:66829149-66828849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               109, 180
               

               Conread position:
               12-306
               

               Cow position:
               chr3:27289570-27289868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 249
               

               Conread position:
               12-306
               

               Cow position:
               chr3:55117336-55117035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 70
               

               Conread position:
               12-306
               

               Cow position:
               chr3:58383595-58383896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               77, 233
               

               Conread position:
               12-309
               

               Cow position:
               chr3:15955177-15955483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               219
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               108, 248
               

               Conread position:
               12-309
               

               Cow position:
               chr3:20471733-20471433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               76, 116
               

               Conread position:
               12-310
               

               Cow position:
               chr3:35884320-35884019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               157, 184
               

               Conread position:
               12-311
               

               Cow position:
               chr3:23735469-23735166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               73, 38
               

               Conread position:
               12-311
               

               Cow position:
               chr3:49327580-49327876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               174, 22
               

               Conread position:
               12-312
               

               Cow position:
               chr3:62826980-62826683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               174, 54
               

               Conread position:
               12-313
               

               Cow position:
               chr3:34556588-34556305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               242, 113
               

               Conread position:
               12-314
               

               Cow position:
               chr3:31047309-31047013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 109
               

               Conread position:
               12-314
               

               Cow position:
               chr3:61839924-61840214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               284, 79
               

               Conread position:
               12-314
               

               Cow position:
               chr3:80564594-80564901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               70, 47
               

               Conread position:
               12-315
               

               Cow position:
               chr3:29887791-29887484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 176
               

               Conread position:
               12-316
               

               Cow position:
               chr3:49461304-49460990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               12-316
               

               Cow position:
               chr3:77496451-77496765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               226
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               178, 59
               

               Conread position:
               12-317
               

               Cow position:
               chr3:2075582-2075895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               178, 0
               

               Conread position:
               12-317
               

               Cow position:
               chr3:17100352-17100049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               227, 64
               

               Conread position:
               12-317
               

               Cow position:
               chr3:22021338-22021034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               197, 39
               

               Conread position:
               12-317
               

               Cow position:
               chr3:22490424-22490735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               189, 16
               

               Conread position:
               12-317
               

               Cow position:
               chr3:26554081-26553773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               81, 115
               

               Conread position:
               12-317
               

               Cow position:
               chr3:35852836-35852534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               223
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               86, 111
               

               Conread position:
               12-317
               

               Cow position:
               chr3:46856579-46856267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               175, 126
               

               Conread position:
               12-317
               

               Cow position:
               chr3:59798887-59799188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               169, 162
               

               Conread position:
               12-317
               

               Cow position:
               chr3:68509392-68509087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               227, 64
               

               Conread position:
               12-317
               

               Cow position:
               chr3:73001540-73001851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               174, 13
               

               Conread position:
               12-317
               

               Cow position:
               chr3:75050996-75050681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               72, 37
               

               Conread position:
               12-317
               

               Cow position:
               chr3:75771333-75771025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               195, 162
               

               Conread position:
               12-318
               

               Cow position:
               chr3:23277909-23277601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               119, 64
               

               Conread position:
               12-320
               

               Cow position:
               chr3:2506846-2506532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 102
               

               Conread position:
               12-320
               

               Cow position:
               chr3:6838833-6839149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               178, 0
               

               Conread position:
               12-320
               

               Cow position:
               chr3:12712290-12711974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               12-320
               

               Cow position:
               chr3:23169437-23169123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               12-320
               

               Cow position:
               chr3:49119399-49119082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               12-320
               

               Cow position:
               chr3:67161569-67161886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               168, 53
               

               Conread position:
               12-320
               

               Cow position:
               chr3:79208356-79208054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               234
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               174, 11
               

               Conread position:
               12-321
               

               Cow position:
               chr3:5420230-5419918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               174, 36
               

               Conread position:
               12-321
               

               Cow position:
               chr3:12255113-12255422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               163, 151
               

               Conread position:
               12-321
               

               Cow position:
               chr3:14626517-14626213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 114
               

               Conread position:
               12-321
               

               Cow position:
               chr3:26903750-26904055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 78
               

               Conread position:
               12-321
               

               Cow position:
               chr3:37186474-37186771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               284, 64
               

               Conread position:
               12-321
               

               Cow position:
               chr3:38497577-38497888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               78, 117
               

               Conread position:
               12-321
               

               Cow position:
               chr3:42461333-42461642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               248, 218
               

               Conread position:
               12-321
               

               Cow position:
               chr3:49793046-49793338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               69, 111
               

               Conread position:
               12-321
               

               Cow position:
               chr3:80082184-80081878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 123
               

               Conread position:
               12-322
               

               Cow position:
               chr3:20802995-20802678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 71
               

               Conread position:
               12-322
               

               Cow position:
               chr3:32619210-32618893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               108, 193
               

               Conread position:
               12-325
               

               Cow position:
               chr3:2903665-2903348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               87, 186
               

               Conread position:
               12-325
               

               Cow position:
               chr3:52017393-52017717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               109, 99
               

               Conread position:
               12-326
               

               Cow position:
               chr3:45881538-45881853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               228
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               27, 231
               

               Conread position:
               12-326
               

               Cow position:
               chr3:59691537-59691844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 0
               

               Conread position:
               12-326
               

               Cow position:
               chr3:69751068-69750752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               109, 175
               

               Conread position:
               12-343
               

               Cow position:
               chr3:60174844-60174517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               67, 185
               

               Conread position:
               12-375
               

               Cow position:
               chr3:9843211-9843587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 120
               

               Conread position:
               12-375
               

               Cow position:
               chr3:53047008-53046659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               256
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               224, 61
               

               Conread position:
               12-377
               

               Cow position:
               chr3:82460805-82461183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               266
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               54, 37
               

               Conread position:
               12-380
               

               Cow position:
               chr3:26219428-26219044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               174, 116
               

               Conread position:
               12-380
               

               Cow position:
               chr3:28908570-28908196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               84, 189
               

               Conread position:
               12-380
               

               Cow position:
               chr3:73708692-73709054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 64
               

               Conread position:
               12-380
               

               Cow position:
               chr3:80740224-80740573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               284, 54
               

               Conread position:
               12-383
               

               Cow position:
               chr3:48241254-48241626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 201
               

               Conread position:
               12-383
               

               Cow position:
               chr3:59001112-59000744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 109
               

               Conread position:
               12-395
               

               Cow position:
               chr3:49218674-49218292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 109
               

               Conread position:
               12-395
               

               Cow position:
               chr3:51147031-51146647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               262
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               174, 28
               

               Conread position:
               12-416
               

               Cow position:
               chr3:54782378-54781974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               112, 75
               

               Conread position:
               12-482
               

               Cow position:
               chr3:14717447-14717901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 109
               

               Conread position:
               13-202
               

               Cow position:
               chr3:6897996-6898176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               174, 87
               

               Conread position:
               13-203
               

               Cow position:
               chr3:39945131-39944948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               13-212
               

               Cow position:
               chr3:36728580-36728777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               191, 0
               

               Conread position:
               13-212
               

               Cow position:
               chr3:59341976-59342173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               107, 126
               

               Conread position:
               13-242
               

               Cow position:
               chr3:470796-470559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               5, 16
               

               Conread position:
               13-242
               

               Cow position:
               chr3:37580690-37580451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               13-256
               

               Cow position:
               chr3:68357738-68357497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               131, 137
               

               Conread position:
               13-259
               

               Cow position:
               chr3:8901050-8901299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               77, 137
               

               Conread position:
               13-273
               

               Cow position:
               chr3:58158818-58158569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               173, 55
               

               Conread position:
               13-287
               

               Cow position:
               chr3:48605330-48605609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               13-296
               

               Cow position:
               chr3:55039788-55039501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               13-301
               

               Cow position:
               chr3:4864883-4864587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               205, 0
               

               Conread position:
               13-304
               

               Cow position:
               chr3:6442869-6443168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               128, 115
               

               Conread position:
               13-305
               

               Cow position:
               chr3:42563089-42563382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               112, 63
               

               Conread position:
               13-320
               

               Cow position:
               chr3:14552514-14552821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 13
               

               Conread position:
               13-321
               

               Cow position:
               chr3:82056474-82056164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               227, 40
               

               Conread position:
               13-380
               

               Cow position:
               chr3:79884852-79884479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 108
               

               Conread position:
               14-132
               

               Cow position:
               chr3:55836281-55836164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 107
               

               Conread position:
               14-132
               

               Cow position:
               chr3:65079285-65079168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               14-195
               

               Cow position:
               chr3:63688127-63687947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               14-202
               

               Cow position:
               chr3:64536907-64536722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               14-208
               

               Cow position:
               chr3:64294312-64294506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               53, 71
               

               Conread position:
               14-211
               

               Cow position:
               chr3:52486917-52487114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               155
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-212
               

               Cow position:
               chr3:37972822-37973014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               14-212
               

               Cow position:
               chr3:68716908-68716711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               68, 63
               

               Conread position:
               14-242
               

               Cow position:
               chr3:40101036-40100808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               14-274
               

               Cow position:
               chr3:53429253-53429001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               109, 62
               

               Conread position:
               14-287
               

               Cow position:
               chr3:35283450-35283186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               172, 68
               

               Conread position:
               14-288
               

               Cow position:
               chr3:40689318-40689044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               172, 32
               

               Conread position:
               14-289
               

               Cow position:
               chr3:12797257-12796976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               70, 63
               

               Conread position:
               14-294
               

               Cow position:
               chr3:63703837-63704100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               14-296
               

               Cow position:
               chr3:53588757-53588469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               83, 169
               

               Conread position:
               14-298
               

               Cow position:
               chr3:26742069-26741782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               187, 14
               

               Conread position:
               14-314
               

               Cow position:
               chr3:2007909-2008198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               14-314
               

               Cow position:
               chr3:18459885-18459583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 198
               

               Conread position:
               14-314
               

               Cow position:
               chr3:31500990-31501288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               176, 53
               

               Conread position:
               14-314
               

               Cow position:
               chr3:61191282-61190988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               240, 168
               

               Conread position:
               14-316
               

               Cow position:
               chr3:61225099-61224809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               168, 57
               

               Conread position:
               14-317
               

               Cow position:
               chr3:2483091-2483387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               227, 62
               

               Conread position:
               14-322
               

               Cow position:
               chr3:74233845-74234136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               164, 74
               

               Conread position:
               14-324
               

               Cow position:
               chr3:48296346-48296657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               281, 115
               

               Conread position:
               14-325
               

               Cow position:
               chr3:75710948-75711258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               81, 111
               

               Conread position:
               14-326
               

               Cow position:
               chr3:5101125-5100817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 118
               

               Conread position:
               14-362
               

               Cow position:
               chr3:71231041-71231383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 173
               

               Conread position:
               15-200
               

               Cow position:
               chr3:20519881-20520066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-206
               

               Cow position:
               chr3:55110207-55110017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               15-287
               

               Cow position:
               chr3:22676443-22676183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               15-340
               

               Cow position:
               chr3:30531597-30531919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               126, 38
               

               Conread position:
               15-374
               

               Cow position:
               chr3:58969252-58968906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               74, 32
               

               Conread position:
               16-157
               

               Cow position:
               chr3:7661526-7661667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               16-200
               

               Cow position:
               chr3:27515893-27516076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               16-266
               

               Cow position:
               chr3:15786200-15786454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               186, 0
               

               Conread position:
               16-280
               

               Cow position:
               chr3:7338140-7337873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               106, 48
               

               Conread position:
               16-296
               

               Cow position:
               chr3:53903826-53904096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               165, 60
               

               Conread position:
               16-298
               

               Cow position:
               chr3:54495700-54495986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               170, 278
               

               Conread position:
               16-312
               

               Cow position:
               chr3:77271640-77271338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               77, 18
               

               Conread position:
               16-317
               

               Cow position:
               chr3:7566777-7566484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 23
               

               Conread position:
               17-169
               

               Cow position:
               chr3:61174949-61175101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               17-222
               

               Cow position:
               chr3:71488679-71488473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               180, 12
               

               Conread position:
               17-244
               

               Cow position:
               chr3:52148038-52147811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               169, 95
               

               Conread position:
               17-244
               

               Cow position:
               chr3:54909204-54909430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               77, 39
               

               Conread position:
               17-244
               

               Cow position:
               chr3:67044455-67044232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               17-276
               

               Cow position:
               chr3:31771338-31771595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               226, 103
               

               Conread position:
               17-310
               

               Cow position:
               chr3:15685272-15684991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               169, 119
               

               Conread position:
               17-356
               

               Cow position:
               chr3:68647798-68648145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               17-375
               

               Cow position:
               chr3:57763845-57764222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               48, 324
               

               Conread position:
               18-135
               

               Cow position:
               chr3:70335577-70335463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               18-273
               

               Cow position:
               chr3:44535959-44535702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               135, 51
               

               Conread position:
               18-287
               

               Cow position:
               chr3:18670830-18671104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               123, 108
               

               Conread position:
               18-322
               

               Cow position:
               chr3:45312691-45312995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 109
               

               Conread position:
               18-322
               

               Cow position:
               chr3:47284479-47284781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               221, 74
               

               Conread position:
               19-317
               

               Cow position:
               chr3:72018763-72019054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 92
               

               Conread position:
               19-320
               

               Cow position:
               chr3:29807103-29807409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               217
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               169, 72
               

               Conread position:
               19-326
               

               Cow position:
               chr3:7857992-7858317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               167, 319
               

               Conread position:
               20-200
               

               Cow position:
               chr3:59604512-59604690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               23-191
               

               Cow position:
               chr3:69766592-69766425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               138
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               23-212
               

               Cow position:
               chr3:36595499-36595686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               181, 0
               

               Conread position:
               23-212
               

               Cow position:
               chr3:82314963-82314776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               118, 109
               

               Conread position:
               23-243
               

               Cow position:
               chr3:32772880-32773098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               147, 88
               

               Conread position:
               23-244
               

               Cow position:
               chr3:32363929-32363703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               23-296
               

               Cow position:
               chr3:25666112-25666377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               216, 161
               

               Conread position:
               23-306
               

               Cow position:
               chr3:51604963-51604674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               195, 261
               

               Conread position:
               23-313
               

               Cow position:
               chr3:522369-522643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               154, 105
               

               Conread position:
               23-317
               

               Cow position:
               chr3:53149970-53150268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               215
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               68, 204
               

               Conread position:
               23-320
               

               Cow position:
               chr3:82359677-82359986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               63, 193
               

               Conread position:
               23-375
               

               Cow position:
               chr3:53270464-53270830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               29, 354
               

               Conread position:
               24-176
               

               Cow position:
               chr3:55319111-55319263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               24-186
               

               Cow position:
               chr3:27553198-27553357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               24-212
               

               Cow position:
               chr3:37637331-37637145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               180, 0
               

               Conread position:
               24-288
               

               Cow position:
               chr3:65019977-65020245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               24-326
               

               Cow position:
               chr3:13117992-13118289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               65, 89
               

               Conread position:
               24-476
               

               Cow position:
               chr3:17952301-17952761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 186
               

               Conread position:
               25-200
               

               Cow position:
               chr3:59344891-59345065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               25-200
               

               Cow position:
               chr3:70449993-70450168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               117, 103
               

               Conread position:
               25-208
               

               Cow position:
               chr3:11031300-11031111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               25-317
               

               Cow position:
               chr3:67544228-67543927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               57, 89
               

               Conread position:
               25-321
               

               Cow position:
               chr3:59366197-59366500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               167, 10
               

               Conread position:
               25-328
               

               Cow position:
               chr3:83490724-83491037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               89, 23
               

               Conread position:
               25-380
               

               Cow position:
               chr3:29891771-29891402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               160, 138
               

               Conread position:
               26-128
               

               Cow position:
               chr3:48994735-48994837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               27-195
               

               Cow position:
               chr3:66805418-66805585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               114, 67
               

               Conread position:
               27-231
               

               Cow position:
               chr3:41053464-41053665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               160, 22
               

               Conread position:
               27-296
               

               Cow position:
               chr3:15081091-15080829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               223, 177
               

               Conread position:
               27-310
               

               Cow position:
               chr3:12323716-12324008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               138, 83
               

               Conread position:
               27-314
               

               Cow position:
               chr3:17222502-17222208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               69, 7
               

               Conread position:
               27-315
               

               Cow position:
               chr3:61361065-61361345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               106, 47
               

               Conread position:
               27-330
               

               Cow position:
               chr3:83442231-83441929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               223, 92
               

               Conread position:
               28-380
               

               Cow position:
               chr3:65058355-65058705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               250
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               176, 15
               

               Conread position:
               29-184
               

               Cow position:
               chr3:50069429-50069584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               60, 76
               

               Conread position:
               29-194
               

               Cow position:
               chr3:59179059-59179220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               29-321
               

               Cow position:
               chr3:11254502-11254215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               87, 112
               

               Conread position:
               29-380
               

               Cow position:
               chr3:71497496-71497131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 252
               

               Conread position:
               30-273
               

               Cow position:
               chr3:80973005-80973251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               156, 14
               

               Conread position:
               30-296
               

               Cow position:
               chr3:83816150-83815873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               65, 213
               

               Conread position:
               30-320
               

               Cow position:
               chr3:49678771-49679075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               5, 230
               

               Conread position:
               31-200
               

               Cow position:
               chr3:72801700-72801531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               31-223
               

               Cow position:
               chr3:56160957-56161151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               87, 41
               

               Conread position:
               31-223
               

               Cow position:
               chr3:76091940-76092132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               161, 59
               

               Conread position:
               31-237
               

               Cow position:
               chr3:83988136-83988338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               168, 45
               

               Conread position:
               31-296
               

               Cow position:
               chr3:11640089-11640350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               27, 46
               

               Conread position:
               31-311
               

               Cow position:
               chr3:70895699-70895981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               202
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               173, 21
               

               Conread position:
               32-195
               

               Cow position:
               chr3:37662802-37662965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               33-195
               

               Cow position:
               chr3:30394960-30394800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               33-206
               

               Cow position:
               chr3:43028723-43028550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               33-212
               

               Cow position:
               chr3:11186872-11186695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               33-298
               

               Cow position:
               chr3:22632592-22632861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               168, 261
               

               Conread position:
               34-200
               

               Cow position:
               chr3:3086254-3086420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               95, 105
               

               Conread position:
               34-244
               

               Cow position:
               chr3:34096294-34096091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               34-267
               

               Cow position:
               chr3:2707070-2706834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               188, 126
               

               Conread position:
               34-288
               

               Cow position:
               chr3:29311194-29310939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               86, 200
               

               Conread position:
               34-288
               

               Cow position:
               chr3:49541107-49540852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               107, 94
               

               Conread position:
               34-306
               

               Cow position:
               chr3:18184723-18185004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               34-392
               

               Cow position:
               chr3:58206794-58206436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               105, 17
               

               Conread position:
               35-200
               

               Cow position:
               chr3:58060961-58060796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               35-303
               

               Cow position:
               chr3:61467273-61467530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               151, 49
               

               Conread position:
               35-310
               

               Cow position:
               chr3:61171845-61171572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               211, 11
               

               Conread position:
               35-317
               

               Cow position:
               chr3:16547332-16547616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 230
               

               Conread position:
               37-205
               

               Cow position:
               chr3:76901852-76902017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               38-170
               

               Cow position:
               chr3:15377765-15377633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               38-195
               

               Cow position:
               chr3:36126312-36126469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               38-212
               

               Cow position:
               chr3:11562-11734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               38-289
               

               Cow position:
               chr3:48852302-48852051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               148, 37
               

               Conread position:
               38-304
               

               Cow position:
               chr3:22481448-22481177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               103, 41
               

               Conread position:
               38-304
               

               Cow position:
               chr3:58283351-58283078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               103, 90
               

               Conread position:
               38-311
               

               Cow position:
               chr3:80071776-80072061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               148, 82
               

               Conread position:
               38-313
               

               Cow position:
               chr3:7678337-7678605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               208, 13
               

               Conread position:
               38-314
               

               Cow position:
               chr3:83474408-83474679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               212, 81
               

               Conread position:
               38-317
               

               Cow position:
               chr3:2393313-2393022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               38-325
               

               Cow position:
               chr3:209981-210265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 159
               

               Conread position:
               39-212
               

               Cow position:
               chr3:16233919-16233748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               39-256
               

               Cow position:
               chr3:52722345-52722123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               51, 105
               

               Conread position:
               39-287
               

               Cow position:
               chr3:4222979-4223221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               95, 34
               

               Conread position:
               39-306
               

               Cow position:
               chr3:61857156-61857433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               40-195
               

               Cow position:
               chr3:20862891-20863046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               40-212
               

               Cow position:
               chr3:26218055-26217885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               40-314
               

               Cow position:
               chr3:81471436-81471159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               199, 36
               

               Conread position:
               40-322
               

               Cow position:
               chr3:59451256-59451535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               151, 88
               

               Conread position:
               40-323
               

               Cow position:
               chr3:55272379-55272100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               210, 69
               

               Conread position:
               40-358
               

               Cow position:
               chr3:69945278-69944956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               212
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               101, 92
               

               Conread position:
               41-304
               

               Cow position:
               chr3:57479667-57479397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               129, 47
               

               Conread position:
               42-172
               

               Cow position:
               chr3:4319334-4319205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               42-256
               

               Cow position:
               chr3:48900839-48900625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               139, 113
               

               Conread position:
               43-192
               

               Cow position:
               chr3:76614307-76614455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               43-212
               

               Cow position:
               chr3:27143301-27143468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               43-287
               

               Cow position:
               chr3:27609796-27610045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               126, 147
               

               Conread position:
               43-317
               

               Cow position:
               chr3:73762794-73762526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               98, 85
               

               Conread position:
               43-366
               

               Cow position:
               chr3:15052278-15051958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               50, 94
               

               Conread position:
               45-298
               

               Cow position:
               chr3:31780944-31781197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               194, 245
               

               Conread position:
               45-316
               

               Cow position:
               chr3:78076858-78077128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               156, 31
               

               Conread position:
               47-200
               

               Cow position:
               chr3:50099160-50099315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               48-272
               

               Cow position:
               chr3:34571067-34571295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               122, 35
               

               Conread position:
               48-314
               

               Cow position:
               chr3:59271228-59271478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               202, 73
               

               Conread position:
               49-193
               

               Cow position:
               chr3:61323024-61323165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               49-321
               

               Cow position:
               chr3:59101505-59101773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               200, 136
               

               Conread position:
               49-369
               

               Cow position:
               chr3:54903244-54903566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               137, 5
               

               Conread position:
               50-296
               

               Cow position:
               chr3:31309691-31309437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               33, 157
               

               Conread position:
               50-317
               

               Cow position:
               chr3:71246706-71246965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               40, 73
               

               Conread position:
               50-337
               

               Cow position:
               chr3:82657414-82657125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               203, 154
               

               Conread position:
               50-375
               

               Cow position:
               chr3:55970178-55970507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               159, 70
               

               Conread position:
               51-325
               

               Cow position:
               chr3:2397111-2396831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               197
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               52-317
               

               Cow position:
               chr3:83920874-83921138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               199
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               145, 24
               

               Conread position:
               53-229
               

               Cow position:
               chr3:13350591-13350766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               68, 23
               

               Conread position:
               55-317
               

               Cow position:
               chr3:23476678-23476943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               144, 15
               

               Conread position:
               56-304
               

               Cow position:
               chr3:47520053-47520309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               56-317
               

               Cow position:
               chr3:2024861-2025126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               158, 144
               

               Conread position:
               61-304
               

               Cow position:
               chr3:78200949-78201197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               125, 182
               

               Conread position:
               61-315
               

               Cow position:
               chr3:57754798-57754539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               125, 50
               

               Conread position:
               61-320
               

               Cow position:
               chr3:67704218-67704486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               26, 81
               

               Conread position:
               62-200
               

               Cow position:
               chr3:24549149-24549011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               62-325
               

               Cow position:
               chr3:53112851-53113121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 262
               

               Conread position:
               64-200
               

               Cow position:
               chr3:83728185-83728054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               65-375
               

               Cow position:
               chr3:46900881-46901199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               77, 56
               

               Conread position:
               67-316
               

               Cow position:
               chr3:53790856-53790598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               60, 179
               

               Conread position:
               67-326
               

               Cow position:
               chr3:46161157-46160896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               150, 156
               

               Conread position:
               69-321
               

               Cow position:
               chr3:65800285-65800533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               74, 48
               

               Conread position:
               70-202
               

               Cow position:
               chr3:18700507-18700374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               70-296
               

               Cow position:
               chr3:70675908-70676141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               71-298
               

               Cow position:
               chr3:35975413-35975189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               71-317
               

               Cow position:
               chr3:59611024-59610781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               139, 50
               

               Conread position:
               75-306
               

               Cow position:
               chr3:19198374-19198600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               11, 174
               

               Conread position:
               77-314
               

               Cow position:
               chr3:2518839-2518594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               77-329
               

               Cow position:
               chr3:70401601-70401853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               220, 44
               

               Conread position:
               77-330
               

               Cow position:
               chr3:83934212-83934461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 63
               

               Conread position:
               77-375
               

               Cow position:
               chr3:2216058-2216368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               109, 43
               

               Conread position:
               77-394
               

               Cow position:
               chr3:53909812-53910128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               71, 34
               

               Conread position:
               78-314
               

               Cow position:
               chr3:72473606-72473850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               79-320
               

               Cow position:
               chr3:30463466-30463228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               217, 169
               

               Conread position:
               81-314
               

               Cow position:
               chr3:11019820-11020059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               139, 90
               

               Conread position:
               82-313
               

               Cow position:
               chr3:8393049-8393286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               83-317
               

               Cow position:
               chr3:70333769-70333540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               156, 38
               

               Conread position:
               83-321
               

               Cow position:
               chr3:66116407-66116166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               162, 8
               

               Conread position:
               83-329
               

               Cow position:
               chr3:25691452-25691707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               5, 139
               

               Conread position:
               83-367
               

               Cow position:
               chr3:74533051-74533340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               5, 211
               

               Conread position:
               83-377
               

               Cow position:
               chr3:84000319-84000617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               166, 23
               

               Conread position:
               85-296
               

               Cow position:
               chr3:79148570-79148352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               85-297
               

               Cow position:
               chr3:72121-72331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               86-355
               

               Cow position:
               chr3:27274247-27274510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               164, 51
               

               Conread position:
               87-276
               

               Cow position:
               chr3:59392399-59392207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               105, 39
               

               Conread position:
               88-320
               

               Cow position:
               chr3:55124569-55124340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               208, 170
               

               Conread position:
               89-306
               

               Cow position:
               chr3:29596105-29596317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               90-287
               

               Cow position:
               chr3:45534588-45534389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               96, 31
               

               Conread position:
               90-297
               

               Cow position:
               chr3:13330061-13329861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               164, 37
               

               Conread position:
               90-317
               

               Cow position:
               chr3:56658-56436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               88, 31
               

               Conread position:
               90-317
               

               Cow position:
               chr3:19006378-19006600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               90-317
               

               Cow position:
               chr3:58540819-58540586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               95, 31
               

               Conread position:
               90-317
               

               Cow position:
               chr3:78946128-78945894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               51, 67
               

               Conread position:
               90-320
               

               Cow position:
               chr3:29812955-29813188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               119, 37
               

               Conread position:
               90-321
               

               Cow position:
               chr3:23471757-23471522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               100, 190
               

               Conread position:
               90-321
               

               Cow position:
               chr3:23944808-23945043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               96, 173
               

               Conread position:
               90-324
               

               Cow position:
               chr3:17957178-17957411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               153, 55
               

               Conread position:
               90-355
               

               Cow position:
               chr3:3985041-3985306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               160, 125
               

               Conread position:
               90-366
               

               Cow position:
               chr3:15229108-15228833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               123, 116
               

               Conread position:
               90-366
               

               Cow position:
               chr3:63179579-63179847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               159, 114
               

               Conread position:
               90-380
               

               Cow position:
               chr3:5096914-5097214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               35, 110
               

               Conread position:
               91-264
               

               Cow position:
               chr3:80202319-80202494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               91-287
               

               Cow position:
               chr3:39970160-39969960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               94, 152
               

               Conread position:
               91-288
               

               Cow position:
               chr3:34316252-34316049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               91-296
               

               Cow position:
               chr3:18854805-18855012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               152, 94
               

               Conread position:
               91-296
               

               Cow position:
               chr3:51609528-51609737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               95, 203
               

               Conread position:
               91-296
               

               Cow position:
               chr3:56704825-56704627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               91-309
               

               Cow position:
               chr3:66885326-66885108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               102, 152
               

               Conread position:
               91-310
               

               Cow position:
               chr3:56059519-56059741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               180, 94
               

               Conread position:
               91-317
               

               Cow position:
               chr3:71430499-71430266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               95, 10
               

               Conread position:
               91-363
               

               Cow position:
               chr3:64281224-64280945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               95, 144
               

               Conread position:
               91-393
               

               Cow position:
               chr3:53739481-53739170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               7, 278
               

               Conread position:
               91-398
               

               Cow position:
               chr3:23876710-23877023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               155, 105
               

               Conread position:
               92-273
               

               Cow position:
               chr3:33693362-33693544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               98, 142
               

               Conread position:
               92-296
               

               Cow position:
               chr3:30417842-30418046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               147, 118
               

               Conread position:
               92-317
               

               Cow position:
               chr3:73443374-73443149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               162, 147
               

               Conread position:
               92-321
               

               Cow position:
               chr3:66292465-66292235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               127, 35
               

               Conread position:
               93-289
               

               Cow position:
               chr3:83369036-83369227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               161, 103
               

               Conread position:
               93-313
               

               Cow position:
               chr3:71161508-71161732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               93-317
               

               Cow position:
               chr3:4031682-4031911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               103, 163
               

               Conread position:
               93-384
               

               Cow position:
               chr3:64172159-64172447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               71, 86
               

               Conread position:
               94-328
               

               Cow position:
               chr3:19789404-19789164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               120, 110
               

               Conread position:
               95-244
               

               Cow position:
               chr3:3096631-3096484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               95-322
               

               Cow position:
               chr3:52863467-52863238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               107, 26
               

               Conread position:
               95-329
               

               Cow position:
               chr3:67744912-67744675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               65, 168
               

               Conread position:
               97-310
               

               Cow position:
               chr3:66901024-66900803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               146, 195
               

               Conread position:
               97-317
               

               Cow position:
               chr3:59208532-59208755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               157, 142
               

               Conread position:
               97-321
               

               Cow position:
               chr3:39171766-39171538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               98-311
               

               Cow position:
               chr3:17456550-17456333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               88, 184
               

               Conread position:
               98-317
               

               Cow position:
               chr3:77365575-77365357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               63, 78
               

               Conread position:
               98-397
               

               Cow position:
               chr3:68583283-68582982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               141, 29
               

               Conread position:
               98-486
               

               Cow position:
               chr3:81277985-81277578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               267
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               29, 146
               

               Conread position:
               99-291
               

               Cow position:
               chr3:18607088-18607285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 165
               

               Conread position:
               99-295
               

               Cow position:
               chr3:34392376-34392181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               89, 28
               

               Conread position:
               99-317
               

               Cow position:
               chr3:49482984-49482766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               139, 27
               

               Conread position:
               99-317
               

               Cow position:
               chr3:63861181-63860951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               85, 200
               

               Conread position:
               99-321
               

               Cow position:
               chr3:26065721-26065949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               98, 142
               

               Conread position:
               99-321
               

               Cow position:
               chr3:75158085-75158304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               198, 95
               

               Conread position:
               99-325
               

               Cow position:
               chr3:38863833-38864064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               39, 109
               

               Conread position:
               100-306
               

               Cow position:
               chr3:42483621-42483829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               100-321
               

               Cow position:
               chr3:42588070-42588302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               100-380
               

               Cow position:
               chr3:57624184-57624471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               39, 100
               

               Conread position:
               101-363
               

               Cow position:
               chr3:5374057-5374318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               118, 20
               

               Conread position:
               103-379
               

               Cow position:
               chr3:6873521-6873240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               76, 260
               

               Conread position:
               103-380
               

               Cow position:
               chr3:73764469-73764188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               151, 34
               

               Conread position:
               105-314
               

               Cow position:
               chr3:54945851-54946066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               82, 29
               

               Conread position:
               106-287
               

               Cow position:
               chr3:525081-525258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               144, 90
               

               Conread position:
               109-325
               

               Cow position:
               chr3:51578591-51578372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               95, 131
               

               Conread position:
               109-380
               

               Cow position:
               chr3:13302126-13301843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 103
               

               Conread position:
               110-251
               

               Cow position:
               chr3:17451203-17451059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 133
               

               Conread position:
               115-320
               

               Cow position:
               chr3:73590262-73590055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               181, 31
               

               Conread position:
               117-317
               

               Cow position:
               chr3:23445155-23444956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 82
               

               Conread position:
               118-325
               

               Cow position:
               chr3:39661709-39661508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               125, 21
               

               Conread position:
               118-381
               

               Cow position:
               chr3:51234357-51234088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               123, 82
               

               Conread position:
               120-314
               

               Cow position:
               chr3:71237898-71238094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               176, 37
               

               Conread position:
               120-322
               

               Cow position:
               chr3:4087425-4087218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               120, 85
               

               Conread position:
               126-321
               

               Cow position:
               chr3:26970572-26970772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               64, 115
               

               Conread position:
               128-327
               

               Cow position:
               chr3:44932257-44932462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               70, 195
               

               Conread position:
               130-321
               

               Cow position:
               chr3:15752877-15752690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               168, 55
               

               Conread position:
               140-321
               

               Cow position:
               chr3:8060893-8061070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               113, 45
               

               Conread position:
               141-317
               

               Cow position:
               chr3:4861451-4861624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               109, 98
               

               Conread position:
               147-330
               

               Cow position:
               chr3:17447840-17447656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               103, 78
               
Show alignments to all cow chromosomes.
Conread position:	1-209
Cow position:	chr3:18815279-18815487 (view UCSC Genome Browser custom track)
Alignm length:	210
Alignm identity:	148
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	129, 145
Conread position:	4-207
Cow position:	chr3:79921467-79921263 (view UCSC Genome Browser custom track)
Alignm length:	205
Alignm identity:	144
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	11, 0
Conread position:	4-325
Cow position:	chr3:10346972-10347302 (view UCSC Genome Browser custom track)
Alignm length:	334
Alignm identity:	230
Alignm E-value:	4e-39
Alignm gaps (pig, cow):	88, 243
Conread position:	5-211
Cow position:	chr3:45184214-45184016 (view UCSC Genome Browser custom track)
Alignm length:	207
Alignm identity:	156
Alignm E-value:	7e-34
Alignm gaps (pig, cow):	19, 0
Conread position:	5-237
Cow position:	chr3:79139359-79139126 (view UCSC Genome Browser custom track)
Alignm length:	237
Alignm identity:	158
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	96, 195
Conread position:	5-242
Cow position:	chr3:6402923-6403159 (view UCSC Genome Browser custom track)
Alignm length:	238
Alignm identity:	184
Alignm E-value:	0
Alignm gaps (pig, cow):	195, 0
Conread position:	5-245
Cow position:	chr3:36672378-36672133 (view UCSC Genome Browser custom track)
Alignm length:	247
Alignm identity:	181
Alignm E-value:	9.99995e-41
Alignm gaps (pig, cow):	116, 43
Conread position:	5-258
Cow position:	chr3:7763295-7763545 (view UCSC Genome Browser custom track)
Alignm length:	257
Alignm identity:	182
Alignm E-value:	7e-34
Alignm gaps (pig, cow):	116, 14
Conread position:	5-269
Cow position:	chr3:58951247-58951511 (view UCSC Genome Browser custom track)
Alignm length:	265
Alignm identity:	195
Alignm E-value:	0
Alignm gaps (pig, cow):	0, 0
Conread position:	5-287
Cow position:	chr3:84419156-84418874 (view UCSC Genome Browser custom track)
Alignm length:	288
Alignm identity:	197
Alignm E-value:	6e-33
Alignm gaps (pig, cow):	204, 116
Conread position:	5-288
Cow position:	chr3:65236645-65236934 (view UCSC Genome Browser custom track)
Alignm length:	292
Alignm identity:	206
Alignm E-value:	9.99995e-41
Alignm gaps (pig, cow):	88, 178
Conread position:	5-296
Cow position:	chr3:6265132-6265429 (view UCSC Genome Browser custom track)
Alignm length:	298
Alignm identity:	207
Alignm E-value:	4.99997e-41
Alignm gaps (pig, cow):	18, 0
Conread position:	5-304
Cow position:	chr3:13517529-13517231 (view UCSC Genome Browser custom track)
Alignm length:	304
Alignm identity:	208
Alignm E-value:	3e-37
Alignm gaps (pig, cow):	234, 145
Conread position:	5-317
Cow position:	chr3:4135192-4134872 (view UCSC Genome Browser custom track)
Alignm length:	322
Alignm identity:	213
Alignm E-value:	6e-32
Alignm gaps (pig, cow):	185, 254
Conread position:	5-322
Cow position:	chr3:13248225-13247906 (view UCSC Genome Browser custom track)
Alignm length:	322
Alignm identity:	202
Alignm E-value:	7e-24
Alignm gaps (pig, cow):	197, 35
Conread position:	6-109
Cow position:	chr3:25011927-25012030 (view UCSC Genome Browser custom track)
Alignm length:	104
Alignm identity:	84
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	6-110
Cow position:	chr3:495657-495553 (view UCSC Genome Browser custom track)
Alignm length:	105
Alignm identity:	87
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	0, 0
Conread position:	6-111
Cow position:	chr3:48242135-48242030 (view UCSC Genome Browser custom track)
Alignm length:	106
Alignm identity:	85
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	6-115
Cow position:	chr3:61894634-61894744 (view UCSC Genome Browser custom track)
Alignm length:	111
Alignm identity:	92
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	29, 0
Conread position:	6-117
Cow position:	chr3:24572275-24572164 (view UCSC Genome Browser custom track)
Alignm length:	112
Alignm identity:	94
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	0, 0