Cow genome map

Conread name: Ss1.1-Pig4-TMW8022H01.5

Conread position: 1-304
Cow position: chrX:30228438-30228130 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 208
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 169, 33

Conread position: 5-185
Cow position: chrX:31839185-31839365 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 129, 145

Conread position: 5-242
Cow position: chrX:126467-126704 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 74, 206

Conread position: 5-244
Cow position: chrX:7382000-7382238 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 41, 0

Conread position: 5-287
Cow position: chrX:42733541-42733820 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 136, 123

Conread position: 5-299
Cow position: chrX:21749782-21749495 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 112, 30

Conread position: 5-320
Cow position: chrX:35041903-35042219 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 232
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 194, 14

Conread position: 5-322
Cow position: chrX:41198762-41199101 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 75, 215

Conread position: 6-107
Cow position: chrX:12671810-12671709 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-114
Cow position: chrX:23038320-23038212 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-119
Cow position: chrX:43730515-43730402 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 6-125
Cow position: chrX:23341320-23341201 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-125
Cow position: chrX:39292066-39291947 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-125
Cow position: chrX:42530230-42530115 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 6-127
Cow position: chrX:40224566-40224445 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 6-127
Cow position: chrX:44983612-44983491 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-128
Cow position: chrX:7573056-7573178 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-128
Cow position: chrX:20954281-20954404 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 6-128
Cow position: chrX:28542205-28542083 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 104
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 6-128
Cow position: chrX:34006465-34006342 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 6-128
Cow position: chrX:36373221-36373343 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-128
Cow position: chrX:39185850-39185972 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-128
Cow position: chrX:40180193-40180072 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 6-128
Cow position: chrX:40321304-40321428 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 6-128
Cow position: chrX:45851608-45851731 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 6-129
Cow position: chrX:5856835-5856712 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-131
Cow position: chrX:15231950-15231826 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 6-131
Cow position: chrX:30093687-30093564 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 115, 70

Conread position: 6-138
Cow position: chrX:34222426-34222557 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 111
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 125, 0

Conread position: 6-141
Cow position: chrX:17892220-17892355 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 6-149
Cow position: chrX:30337236-30337380 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 6-153
Cow position: chrX:6407022-6407163 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 71

Conread position: 6-159
Cow position: chrX:8591217-8591370 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 6-161
Cow position: chrX:47654981-47655132 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 130, 0

Conread position: 6-163
Cow position: chrX:45945310-45945464 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 70, 0

Conread position: 6-167
Cow position: chrX:525353-525514 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 6-167
Cow position: chrX:2079565-2079398 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 6-167
Cow position: chrX:16040003-16039842 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-167
Cow position: chrX:17691937-17692098 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 6-167
Cow position: chrX:24280612-24280773 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 6-167
Cow position: chrX:27749332-27749168 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 6-168
Cow position: chrX:36794671-36794833 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 135, 122

Conread position: 6-185
Cow position: chrX:40648343-40648519 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 135, 70

Conread position: 6-186
Cow position: chrX:2485954-2485774 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 135, 122

Conread position: 6-186
Cow position: chrX:10528097-10527918 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 173, 0

Conread position: 6-186
Cow position: chrX:12021951-12022128 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 135, 130

Conread position: 6-186
Cow position: chrX:24173491-24173312 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 6-186
Cow position: chrX:27997327-27997503 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 129, 0

Conread position: 6-186
Cow position: chrX:33803338-33803156 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 85, 37

Conread position: 6-188
Cow position: chrX:32214794-32214612 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 6-194
Cow position: chrX:2351739-2351927 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 150
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-194
Cow position: chrX:5280176-5279990 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 174, 0

Conread position: 6-194
Cow position: chrX:14407773-14407587 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 126, 0

Conread position: 6-194
Cow position: chrX:19595948-19596138 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 6-194
Cow position: chrX:20976383-20976199 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 71

Conread position: 6-194
Cow position: chrX:28646308-28646123 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 96, 0

Conread position: 6-194
Cow position: chrX:29841492-29841304 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 135, 122

Conread position: 6-195
Cow position: chrX:3207885-3207696 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 6-195
Cow position: chrX:3387783-3387972 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 6-195
Cow position: chrX:9018626-9018437 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 6-195
Cow position: chrX:9403787-9403983 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 6-195
Cow position: chrX:9651368-9651180 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 91, 0

Conread position: 6-195
Cow position: chrX:10415848-10415660 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 6-195
Cow position: chrX:16046825-16047015 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 118, 0

Conread position: 6-195
Cow position: chrX:21844311-21844503 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 104, 144

Conread position: 6-195
Cow position: chrX:24169638-24169449 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 58

Conread position: 6-195
Cow position: chrX:26754952-26754766 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 135, 84

Conread position: 6-195
Cow position: chrX:28513749-28513937 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 6-195
Cow position: chrX:29723128-29723318 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 163, 115

Conread position: 6-195
Cow position: chrX:29844799-29844610 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 6-195
Cow position: chrX:36479609-36479798 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 6-195
Cow position: chrX:36730061-36730250 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 6-195
Cow position: chrX:37079862-37079673 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 6-195
Cow position: chrX:42459849-42460046 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 6-195
Cow position: chrX:43218069-43218262 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 6-195
Cow position: chrX:47362209-47362020 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 135, 122

Conread position: 6-196
Cow position: chrX:4664940-4664750 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-196
Cow position: chrX:12852832-12852643 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 113, 0

Conread position: 6-196
Cow position: chrX:15341361-15341171 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 114

Conread position: 6-198
Cow position: chrX:3405678-3405488 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 115, 0

Conread position: 6-198
Cow position: chrX:19771940-19771758 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 179, 70

Conread position: 6-198
Cow position: chrX:39556139-39555947 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 153
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 182, 71

Conread position: 6-200
Cow position: chrX:626367-626174 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 6-200
Cow position: chrX:2160442-2160636 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 6-200
Cow position: chrX:2499663-2499469 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 135, 122

Conread position: 6-200
Cow position: chrX:3570128-3570322 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 135, 122

Conread position: 6-200
Cow position: chrX:8434530-8434336 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-200
Cow position: chrX:10718187-10718380 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 132, 0

Conread position: 6-200
Cow position: chrX:11904648-11904454 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 137, 144

Conread position: 6-200
Cow position: chrX:13686394-13686586 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 96, 0

Conread position: 6-200
Cow position: chrX:14134152-14134346 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 33, 26

Conread position: 6-200
Cow position: chrX:14409710-14409516 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 6-200
Cow position: chrX:14846397-14846203 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 135, 122

Conread position: 6-200
Cow position: chrX:15438972-15438782 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 71

Conread position: 6-200
Cow position: chrX:15718000-15717809 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 128, 42

Conread position: 6-200
Cow position: chrX:16529682-16529876 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 121, 140

Conread position: 6-200
Cow position: chrX:16853712-16853518 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 135, 122

Conread position: 6-200
Cow position: chrX:18118795-18118601 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 135, 114

Conread position: 6-200
Cow position: chrX:18244666-18244856 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 135, 105

Conread position: 6-200
Cow position: chrX:20742663-20742857 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 135, 122

Conread position: 6-200
Cow position: chrX:22600739-22600546 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 135, 115

Conread position: 6-200
Cow position: chrX:22811563-22811756 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 113, 0

Conread position: 6-200
Cow position: chrX:23139990-23140181 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 54, 0

Conread position: 6-200
Cow position: chrX:23316743-23316552 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 6-200
Cow position: chrX:24102656-24102850 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 6-200
Cow position: chrX:27761017-27761211 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 6-200
Cow position: chrX:28518046-28517854 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 6-200
Cow position: chrX:29760376-29760570 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 6-200
Cow position: chrX:30823193-30823387 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 124, 77

Conread position: 6-200
Cow position: chrX:46297337-46297531 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 6-202
Cow position: chrX:5640942-5640760 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 6-202
Cow position: chrX:40602641-40602835 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 122, 0

Conread position: 6-203
Cow position: chrX:38331059-38331256 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-206
Cow position: chrX:11975810-11975614 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 124, 140

Conread position: 6-206
Cow position: chrX:23135252-23135449 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 6-206
Cow position: chrX:33205315-33205115 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-206
Cow position: chrX:37852816-37853012 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 6-208
Cow position: chrX:21255714-21255915 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 132, 0

Conread position: 6-208
Cow position: chrX:27458932-27459135 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 115, 0

Conread position: 6-208
Cow position: chrX:27982468-27982267 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 124, 111

Conread position: 6-208
Cow position: chrX:30163561-30163361 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 154, 0

Conread position: 6-208
Cow position: chrX:37403346-37403139 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 121, 0

Conread position: 6-208
Cow position: chrX:39386588-39386387 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 135, 81

Conread position: 6-208
Cow position: chrX:41846857-41846655 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 125, 115

Conread position: 6-208
Cow position: chrX:48490207-48490005 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 117, 69

Conread position: 6-209
Cow position: chrX:9898665-9898461 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 103, 123

Conread position: 6-209
Cow position: chrX:25329690-25329893 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 108, 25

Conread position: 6-209
Cow position: chrX:33172281-33172077 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 191, 0

Conread position: 6-211
Cow position: chrX:39699003-39699209 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 115, 0

Conread position: 6-212
Cow position: chrX:2932043-2931838 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 196, 0

Conread position: 6-212
Cow position: chrX:3361496-3361699 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 132, 0

Conread position: 6-212
Cow position: chrX:6566751-6566955 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 198, 0

Conread position: 6-212
Cow position: chrX:7677645-7677850 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 135, 199

Conread position: 6-212
Cow position: chrX:9085656-9085452 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 198, 0

Conread position: 6-212
Cow position: chrX:9128733-9128937 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 198, 0

Conread position: 6-212
Cow position: chrX:12347555-12347759 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 198, 0

Conread position: 6-212
Cow position: chrX:13196294-13196090 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 198, 0

Conread position: 6-212
Cow position: chrX:14134858-14135062 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 75, 71

Conread position: 6-212
Cow position: chrX:14598522-14598726 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 198, 0

Conread position: 6-212
Cow position: chrX:15008755-15008551 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 198, 0

Conread position: 6-212
Cow position: chrX:15114348-15114552 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 198, 0

Conread position: 6-212
Cow position: chrX:16074253-16074457 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 198, 0

Conread position: 6-212
Cow position: chrX:16465977-16466182 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 114, 199

Conread position: 6-212
Cow position: chrX:18462298-18462094 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 198, 0

Conread position: 6-212
Cow position: chrX:19109364-19109160 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 198, 0

Conread position: 6-212
Cow position: chrX:20321090-20320887 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 71

Conread position: 6-212
Cow position: chrX:22567209-22567413 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 198, 0

Conread position: 6-212
Cow position: chrX:22568340-22568138 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 6-212
Cow position: chrX:22613063-22613267 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 198, 0

Conread position: 6-212
Cow position: chrX:22888335-22888540 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 115, 199

Conread position: 6-212
Cow position: chrX:23452921-23452717 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 198, 0

Conread position: 6-212
Cow position: chrX:23986923-23987125 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 135, 18

Conread position: 6-212
Cow position: chrX:25289002-25288798 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 198, 0

Conread position: 6-212
Cow position: chrX:27627032-27627236 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 198, 0

Conread position: 6-212
Cow position: chrX:27759384-27759588 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 198, 0

Conread position: 6-212
Cow position: chrX:30752451-30752655 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 198, 0

Conread position: 6-212
Cow position: chrX:33764021-33764225 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 198, 0

Conread position: 6-212
Cow position: chrX:39549007-39549211 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 198, 0

Conread position: 6-212
Cow position: chrX:39559975-39559772 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 132, 0

Conread position: 6-212
Cow position: chrX:46579178-46578974 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 198, 0

Conread position: 6-213
Cow position: chrX:29864754-29864548 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 115, 0

Conread position: 6-233
Cow position: chrX:21495435-21495658 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 135, 122

Conread position: 6-241
Cow position: chrX:529480-529713 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 79

Conread position: 6-241
Cow position: chrX:9227307-9227066 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 94, 119

Conread position: 6-241
Cow position: chrX:30940858-30941090 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 208, 198

Conread position: 6-242
Cow position: chrX:27323179-27322955 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 6-242
Cow position: chrX:31373255-31373478 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 58, 0

Conread position: 6-242
Cow position: chrX:48227941-48227700 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 6-243
Cow position: chrX:18990123-18989882 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 88, 122

Conread position: 6-243
Cow position: chrX:25205387-25205636 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 6-243
Cow position: chrX:27486087-27486324 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 39, 71

Conread position: 6-243
Cow position: chrX:37377586-37377348 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 180, 25

Conread position: 6-243
Cow position: chrX:43648067-43647829 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 113, 164

Conread position: 6-243
Cow position: chrX:46448151-46447914 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 82, 64

Conread position: 6-244
Cow position: chrX:4630014-4629770 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 6-244
Cow position: chrX:6659052-6659294 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 21, 34

Conread position: 6-244
Cow position: chrX:14908694-14908933 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 191, 25

Conread position: 6-244
Cow position: chrX:25283463-25283235 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 183
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 61, 0

Conread position: 6-244
Cow position: chrX:25302075-25301836 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 74

Conread position: 6-244
Cow position: chrX:41049790-41050034 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 6-244
Cow position: chrX:46771295-46771053 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 6-247
Cow position: chrX:21795173-21795413 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 115, 0

Conread position: 6-247
Cow position: chrX:34840090-34839860 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 6-251
Cow position: chrX:10916431-10916670 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 170, 0

Conread position: 6-253
Cow position: chrX:32144486-32144241 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 198, 0

Conread position: 6-257
Cow position: chrX:18293611-18293858 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 19, 56

Conread position: 6-264
Cow position: chrX:39174536-39174278 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 233, 115

Conread position: 6-267
Cow position: chrX:16722130-16721866 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 34, 195

Conread position: 6-267
Cow position: chrX:24317743-24318003 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 211, 105

Conread position: 6-267
Cow position: chrX:25452227-25452485 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 6-269
Cow position: chrX:29915548-29915281 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 135, 61

Conread position: 6-272
Cow position: chrX:22538277-22538008 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 203, 0

Conread position: 6-272
Cow position: chrX:29777719-29777989 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 179
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 115, 70

Conread position: 6-272
Cow position: chrX:29848954-29848685 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 135, 122

Conread position: 6-272
Cow position: chrX:31449945-31449674 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 211, 0

Conread position: 6-273
Cow position: chrX:21227151-21227419 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 115, 10

Conread position: 6-273
Cow position: chrX:29048709-29048965 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 233, 70

Conread position: 6-273
Cow position: chrX:42855088-42855359 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 70

Conread position: 6-273
Cow position: chrX:44086981-44087254 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 116, 0

Conread position: 6-279
Cow position: chrX:11949816-11949542 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 135, 122

Conread position: 6-279
Cow position: chrX:38151365-38151644 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 135, 122

Conread position: 6-283
Cow position: chrX:23583235-23583516 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 179, 224

Conread position: 6-283
Cow position: chrX:45967839-45968114 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 115, 200

Conread position: 6-286
Cow position: chrX:38072090-38071807 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 176, 64

Conread position: 6-287
Cow position: chrX:1550627-1550913 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 135, 126

Conread position: 6-287
Cow position: chrX:12179645-12179924 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 135, 111

Conread position: 6-287
Cow position: chrX:17794672-17794941 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 244, 70

Conread position: 6-287
Cow position: chrX:24482694-24482410 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 188
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 165, 0

Conread position: 6-287
Cow position: chrX:27422604-27422319 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 195, 132

Conread position: 6-288
Cow position: chrX:1331609-1331901 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 6-288
Cow position: chrX:2945191-2944904 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 186
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 163, 184

Conread position: 6-288
Cow position: chrX:3649131-3648855 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 135, 70

Conread position: 6-288
Cow position: chrX:18950068-18949781 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 216, 269

Conread position: 6-288
Cow position: chrX:20878086-20877799 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 135, 122

Conread position: 6-288
Cow position: chrX:25458960-25458673 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 211, 0

Conread position: 6-289
Cow position: chrX:35937392-35937120 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 201, 69

Conread position: 6-290
Cow position: chrX:11581612-11581906 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 51

Conread position: 6-290
Cow position: chrX:30180249-30179960 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 216, 281

Conread position: 6-290
Cow position: chrX:37072083-37072368 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 205, 115

Conread position: 6-291
Cow position: chrX:9012004-9012295 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 195, 0

Conread position: 6-293
Cow position: chrX:4123512-4123802 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 190

Conread position: 6-296
Cow position: chrX:2300608-2300890 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 96, 192

Conread position: 6-296
Cow position: chrX:2425445-2425150 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 135, 122

Conread position: 6-296
Cow position: chrX:2478950-2478656 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 135, 97

Conread position: 6-296
Cow position: chrX:7054058-7053763 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 130, 79

Conread position: 6-296
Cow position: chrX:16289885-16289590 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 194
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 180, 0

Conread position: 6-296
Cow position: chrX:21415765-21416065 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 197
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 128, 0

Conread position: 6-296
Cow position: chrX:23386862-23386575 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 197
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 216, 115

Conread position: 6-296
Cow position: chrX:30143607-30143313 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 164, 64

Conread position: 6-296
Cow position: chrX:30454945-30454650 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 202
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 191, 0

Conread position: 6-296
Cow position: chrX:32094773-32094478 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 135, 122

Conread position: 6-296
Cow position: chrX:32188682-32188391 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 193
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 160, 175

Conread position: 6-296
Cow position: chrX:33855563-33855266 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 40

Conread position: 6-296
Cow position: chrX:36250185-36249894 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 0

Conread position: 6-296
Cow position: chrX:40544933-40544636 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 83, 124

Conread position: 6-296
Cow position: chrX:41103465-41103758 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 135, 122

Conread position: 6-296
Cow position: chrX:41156988-41157283 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 135, 122

Conread position: 6-296
Cow position: chrX:42086539-42086824 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 107

Conread position: 6-296
Cow position: chrX:42587752-42587461 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 195
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 181, 169

Conread position: 6-296
Cow position: chrX:45089114-45089416 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 210
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 86, 150

Conread position: 6-297
Cow position: chrX:36778082-36778380 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 70, 0

Conread position: 6-298
Cow position: chrX:3417462-3417167 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 193
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 195, 287

Conread position: 6-298
Cow position: chrX:16359332-16359042 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 196
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 195, 83

Conread position: 6-298
Cow position: chrX:18897974-18897682 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 204
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 180, 126

Conread position: 6-298
Cow position: chrX:20038541-20038247 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 198
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 135, 122

Conread position: 6-298
Cow position: chrX:22772332-22772628 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 197
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 135, 122

Conread position: 6-298
Cow position: chrX:27305603-27305899 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 195, 288

Conread position: 6-298
Cow position: chrX:29780422-29780714 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 176, 167

Conread position: 6-298
Cow position: chrX:39714226-39714522 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 135, 122

Conread position: 6-302
Cow position: chrX:21062894-21063195 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 201
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 210, 34

Conread position: 6-303
Cow position: chrX:32584136-32583831 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 182, 253

Conread position: 6-304
Cow position: chrX:5353626-5353319 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 135, 122

Conread position: 6-304
Cow position: chrX:6493409-6493710 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 135, 90

Conread position: 6-304
Cow position: chrX:9096344-9096648 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 187, 132

Conread position: 6-304
Cow position: chrX:14162868-14163174 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 212
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 135, 126

Conread position: 6-304
Cow position: chrX:16703347-16703653 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 191, 0

Conread position: 6-304
Cow position: chrX:16711631-16711937 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 164, 185

Conread position: 6-304
Cow position: chrX:18078233-18077927 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 181, 0

Conread position: 6-304
Cow position: chrX:21833562-21833868 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 180, 0

Conread position: 6-304
Cow position: chrX:22493684-22493990 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 213
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 191, 0

Conread position: 6-304
Cow position: chrX:23122061-23122369 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 215
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 39, 51

Conread position: 6-304
Cow position: chrX:23280683-23280986 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 202, 0

Conread position: 6-304
Cow position: chrX:23299631-23299937 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 210
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 211, 253

Conread position: 6-304
Cow position: chrX:23572123-23571817 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 206
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 180, 0

Conread position: 6-304
Cow position: chrX:24587777-24587471 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 135, 115

Conread position: 6-304
Cow position: chrX:25741437-25741131 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 208, 198

Conread position: 6-304
Cow position: chrX:26531635-26531941 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 213
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 191, 0

Conread position: 6-304
Cow position: chrX:27977152-27976848 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 210
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 135, 122

Conread position: 6-304
Cow position: chrX:31202517-31202823 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 206
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 180, 0

Conread position: 6-304
Cow position: chrX:35240541-35240845 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 215
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 135, 122

Conread position: 6-304
Cow position: chrX:37133857-37133551 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 164, 0

Conread position: 6-304
Cow position: chrX:45786807-45787109 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 181, 122

Conread position: 6-305
Cow position: chrX:20945245-20945541 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 135, 122

Conread position: 6-306
Cow position: chrX:37843397-37843701 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 286

Conread position: 6-306
Cow position: chrX:38967328-38967628 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 61

Conread position: 6-307
Cow position: chrX:35409345-35409634 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 236, 118

Conread position: 6-309
Cow position: chrX:21063963-21064265 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 237, 160

Conread position: 6-310
Cow position: chrX:1055716-1055410 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 47, 125

Conread position: 6-310
Cow position: chrX:15485948-15485640 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 70

Conread position: 6-310
Cow position: chrX:24288236-24287944 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 201, 69

Conread position: 6-311
Cow position: chrX:12309711-12309401 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 71

Conread position: 6-311
Cow position: chrX:47211173-47210860 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 208
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 115, 223

Conread position: 6-313
Cow position: chrX:21592963-21593275 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 70

Conread position: 6-314
Cow position: chrX:11674735-11675052 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 216
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 84, 275

Conread position: 6-314
Cow position: chrX:11844561-11844260 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 228
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 237, 70

Conread position: 6-314
Cow position: chrX:34554412-34554714 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 134, 41

Conread position: 6-314
Cow position: chrX:34754515-34754201 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 0

Conread position: 6-315
Cow position: chrX:24105303-24105613 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 269

Conread position: 6-315
Cow position: chrX:40452536-40452220 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 0

Conread position: 6-316
Cow position: chrX:15147506-15147198 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 17

Conread position: 6-317
Cow position: chrX:5289010-5288691 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 213
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 184, 0

Conread position: 6-317
Cow position: chrX:10831835-10831502 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 113, 0

Conread position: 6-317
Cow position: chrX:20887967-20887654 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 115

Conread position: 6-317
Cow position: chrX:27442875-27442563 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 233, 70

Conread position: 6-317
Cow position: chrX:28134026-28134337 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 181, 70

Conread position: 6-317
Cow position: chrX:34238397-34238706 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 116

Conread position: 6-317
Cow position: chrX:34376629-34376937 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 223
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 120

Conread position: 6-317
Cow position: chrX:35388230-35387911 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 6-317
Cow position: chrX:42470260-42469955 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 0

Conread position: 6-317
Cow position: chrX:44054482-44054797 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 70

Conread position: 6-318
Cow position: chrX:44737314-44736994 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 220
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 185, 109

Conread position: 6-320
Cow position: chrX:26492679-26493001 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 212
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 180, 0

Conread position: 6-320
Cow position: chrX:35681012-35681335 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 178

Conread position: 6-320
Cow position: chrX:37958174-37958496 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 212
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 191, 0

Conread position: 6-321
Cow position: chrX:2786869-2786563 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 219
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 91, 107

Conread position: 6-321
Cow position: chrX:6234757-6234457 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 243, 23

Conread position: 6-321
Cow position: chrX:10437974-10437673 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 233
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 43, 76

Conread position: 6-321
Cow position: chrX:15329330-15329642 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 136, 115

Conread position: 6-321
Cow position: chrX:27446368-27446691 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 229
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 196, 70

Conread position: 6-321
Cow position: chrX:34564977-34565276 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 225
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 290, 69

Conread position: 6-321
Cow position: chrX:41879253-41878937 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 43

Conread position: 6-322
Cow position: chrX:17497773-17498079 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 182

Conread position: 6-322
Cow position: chrX:45501825-45502141 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 219
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 180, 259

Conread position: 6-322
Cow position: chrX:47379790-47379472 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 222
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 255, 179

Conread position: 6-325
Cow position: chrX:161105-161410 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 231
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 240, 131

Conread position: 6-325
Cow position: chrX:6413723-6414045 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 216
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 231, 159

Conread position: 6-325
Cow position: chrX:7718533-7718853 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 70

Conread position: 6-325
Cow position: chrX:13868374-13868702 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 70

Conread position: 6-325
Cow position: chrX:14599213-14599531 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 231
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 72, 17

Conread position: 6-325
Cow position: chrX:22812739-22813064 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 120

Conread position: 6-325
Cow position: chrX:31250069-31250385 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 233
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 66, 28

Conread position: 6-325
Cow position: chrX:31949253-31948939 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 22

Conread position: 6-325
Cow position: chrX:35609663-35609988 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 0

Conread position: 6-325
Cow position: chrX:42994291-42994612 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 160

Conread position: 6-325
Cow position: chrX:47343969-47344293 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 32, 236

Conread position: 6-326
Cow position: chrX:7508804-7509143 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 235
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 82, 12

Conread position: 6-326
Cow position: chrX:11655755-11656091 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 10, 245

Conread position: 6-326
Cow position: chrX:47481477-47481802 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 95, 37

Conread position: 6-327
Cow position: chrX:15139871-15139544 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 223
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 45, 76

Conread position: 6-327
Cow position: chrX:20697926-20697607 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 70

Conread position: 6-327
Cow position: chrX:21665914-21665594 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 60

Conread position: 6-327
Cow position: chrX:31729135-31729441 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 137, 114

Conread position: 6-327
Cow position: chrX:43527180-43527511 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 0

Conread position: 6-329
Cow position: chrX:27705270-27705588 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 126

Conread position: 6-329
Cow position: chrX:37489395-37489726 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 81, 202

Conread position: 6-335
Cow position: chrX:41403638-41403990 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 88, 0

Conread position: 6-335
Cow position: chrX:41410186-41410538 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 88, 0

Conread position: 6-343
Cow position: chrX:44192764-44192433 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 37

Conread position: 6-350
Cow position: chrX:18999575-18999913 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 248, 122

Conread position: 6-358
Cow position: chrX:23396283-23396631 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 237
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 180, 115

Conread position: 6-358
Cow position: chrX:24441570-24441215 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 237
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 135, 122

Conread position: 6-362
Cow position: chrX:45113313-45113653 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 240, 70

Conread position: 6-367
Cow position: chrX:8869708-8869360 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 247
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 109

Conread position: 6-374
Cow position: chrX:11073528-11073143 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 273
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 54, 235

Conread position: 6-375
Cow position: chrX:26441103-26440730 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 222

Conread position: 6-375
Cow position: chrX:31489189-31489571 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 134

Conread position: 6-375
Cow position: chrX:46532843-46532444 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 278
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 76, 136

Conread position: 6-380
Cow position: chrX:5871990-5872375 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 73

Conread position: 6-380
Cow position: chrX:12290414-12290777 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 265
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 232, 46

Conread position: 6-380
Cow position: chrX:18695244-18694873 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 210

Conread position: 6-380
Cow position: chrX:19689892-19690273 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 253
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 63, 15

Conread position: 6-380
Cow position: chrX:28632801-28632427 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 245
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 248, 78

Conread position: 6-380
Cow position: chrX:34502600-34502978 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 70

Conread position: 6-380
Cow position: chrX:42507967-42507590 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 261
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 202, 70

Conread position: 6-388
Cow position: chrX:34441770-34441386 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 70

Conread position: 7-128
Cow position: chrX:16713875-16713996 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 7-167
Cow position: chrX:24788038-24787883 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 104, 0

Conread position: 7-191
Cow position: chrX:6012429-6012244 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 113, 0

Conread position: 7-195
Cow position: chrX:48456668-48456479 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 26

Conread position: 7-200
Cow position: chrX:30060853-30060660 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 7-202
Cow position: chrX:45420997-45420800 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 94, 0

Conread position: 7-212
Cow position: chrX:828570-828772 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 7-223
Cow position: chrX:19437409-19437182 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 127

Conread position: 7-241
Cow position: chrX:25618238-25617996 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 83, 11

Conread position: 7-243
Cow position: chrX:25848593-25848834 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 82, 121

Conread position: 7-243
Cow position: chrX:40142516-40142283 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 221, 69

Conread position: 7-287
Cow position: chrX:24200876-24201145 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 252, 75

Conread position: 7-296
Cow position: chrX:23451497-23451197 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 7-298
Cow position: chrX:28157165-28157466 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 20

Conread position: 7-317
Cow position: chrX:1810483-1810172 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 239, 114

Conread position: 7-317
Cow position: chrX:14924678-14924992 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 142

Conread position: 7-320
Cow position: chrX:25419482-25419163 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 222
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 179, 81

Conread position: 7-321
Cow position: chrX:10866189-10865872 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 114

Conread position: 7-379
Cow position: chrX:151579-151962 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 164

Conread position: 8-212
Cow position: chrX:10915717-10915919 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 196, 0

Conread position: 8-310
Cow position: chrX:27516212-27516513 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 79

Conread position: 9-109
Cow position: chrX:13266144-13266044 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-127
Cow position: chrX:12008002-12007884 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 9-127
Cow position: chrX:27117647-27117762 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 9-136
Cow position: chrX:38667954-38667825 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 9-167
Cow position: chrX:36311279-36311433 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 9-195
Cow position: chrX:30052789-30052603 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 9-195
Cow position: chrX:30159331-30159145 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 9-196
Cow position: chrX:26878347-26878532 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 131, 0

Conread position: 9-198
Cow position: chrX:3808086-3808277 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 87, 140

Conread position: 9-208
Cow position: chrX:14458487-14458289 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 68, 0

Conread position: 9-208
Cow position: chrX:27616518-27616713 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 9-212
Cow position: chrX:4404216-4404416 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 9-212
Cow position: chrX:7755581-7755782 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 195, 0

Conread position: 9-214
Cow position: chrX:30141645-30141439 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 200, 0

Conread position: 9-243
Cow position: chrX:35633073-35632838 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 149, 78

Conread position: 9-264
Cow position: chrX:16706479-16706742 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 9-272
Cow position: chrX:27590353-27590092 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 188, 68

Conread position: 9-276
Cow position: chrX:15596725-15596991 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 188, 51

Conread position: 9-283
Cow position: chrX:27105938-27106219 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 177, 0

Conread position: 9-287
Cow position: chrX:24769180-24768901 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 187
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 177, 112

Conread position: 9-296
Cow position: chrX:1947041-1946744 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 198
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 157, 0

Conread position: 9-296
Cow position: chrX:21785448-21785735 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 132, 48

Conread position: 9-296
Cow position: chrX:23024384-23024673 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 194
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 132, 90

Conread position: 9-297
Cow position: chrX:7178592-7178866 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 235, 67

Conread position: 9-298
Cow position: chrX:14801138-14800845 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 196
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 285

Conread position: 9-298
Cow position: chrX:23215787-23216080 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 197
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 160, 181

Conread position: 9-304
Cow position: chrX:4905309-4905008 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 210
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 132, 119

Conread position: 9-304
Cow position: chrX:15120209-15119906 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 207, 252

Conread position: 9-304
Cow position: chrX:27095799-27096093 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 205
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 132, 123

Conread position: 9-311
Cow position: chrX:10306353-10306659 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 193, 67

Conread position: 9-314
Cow position: chrX:42171616-42171308 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 67

Conread position: 9-317
Cow position: chrX:34990721-34991024 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 214
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 287, 123

Conread position: 9-325
Cow position: chrX:42247496-42247187 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 67

Conread position: 9-326
Cow position: chrX:4996295-4996595 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 287, 58

Conread position: 9-326
Cow position: chrX:29289256-29289580 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 253

Conread position: 9-379
Cow position: chrX:40481191-40480808 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 268
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 83, 15

Conread position: 10-136
Cow position: chrX:47965304-47965178 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 10-200
Cow position: chrX:45973999-45973809 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 127, 137

Conread position: 10-241
Cow position: chrX:26883468-26883220 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 10-241
Cow position: chrX:41192371-41192598 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 171, 100

Conread position: 10-246
Cow position: chrX:5334138-5333899 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 159, 54

Conread position: 10-281
Cow position: chrX:32978576-32978304 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 162

Conread position: 10-326
Cow position: chrX:42462067-42461742 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 11-283
Cow position: chrX:28111177-28111461 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 12-109
Cow position: chrX:37572847-37572944 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-124
Cow position: chrX:28752657-28752545 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-124
Cow position: chrX:34006996-34007108 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 12-127
Cow position: chrX:2715305-2715420 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 12-128
Cow position: chrX:10348151-10348035 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 12-128
Cow position: chrX:16222309-16222424 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 12-128
Cow position: chrX:19399461-19399577 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 12-128
Cow position: chrX:22521538-22521422 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-128
Cow position: chrX:22522148-22522032 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-128
Cow position: chrX:28314108-28314224 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 12-128
Cow position: chrX:48310058-48309944 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 12-136
Cow position: chrX:10256459-10256337 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 12-148
Cow position: chrX:22449597-22449738 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 12-159
Cow position: chrX:8325943-8326088 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 97, 0

Conread position: 12-162
Cow position: chrX:11614404-11614554 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 123
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 12-167
Cow position: chrX:24975620-24975774 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 137, 0

Conread position: 12-170
Cow position: chrX:42221885-42221732 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 115, 0

Conread position: 12-176
Cow position: chrX:14008970-14008806 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 12-185
Cow position: chrX:12437552-12437384 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 12-186
Cow position: chrX:616720-616549 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 63, 0

Conread position: 12-186
Cow position: chrX:8103410-8103236 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-186
Cow position: chrX:22578477-22578307 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 12-186
Cow position: chrX:27678036-27678208 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 12-191
Cow position: chrX:14781662-14781483 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 12-191
Cow position: chrX:24467442-24467263 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 12-192
Cow position: chrX:12096564-12096385 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 109, 0

Conread position: 12-192
Cow position: chrX:38577216-38577395 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 85, 0

Conread position: 12-194
Cow position: chrX:5406741-5406920 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 116, 0

Conread position: 12-194
Cow position: chrX:9346828-9347005 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 12-194
Cow position: chrX:22325758-22325941 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 80, 140

Conread position: 12-194
Cow position: chrX:47219572-47219390 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 123
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:1975914-1975731 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:2362182-2362365 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:2664692-2664875 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:3078904-3078722 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 156, 0

Conread position: 12-195
Cow position: chrX:3157301-3157484 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:3658371-3658188 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:5127606-5127783 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 12-195
Cow position: chrX:5646421-5646238 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:5676015-5675835 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 12-195
Cow position: chrX:6558533-6558719 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 117, 0

Conread position: 12-195
Cow position: chrX:7097141-7097323 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 79, 0

Conread position: 12-195
Cow position: chrX:10922888-10922705 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:11860559-11860376 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:15561132-15560948 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 136, 0

Conread position: 12-195
Cow position: chrX:15781264-15781447 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:19495277-19495094 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:19774797-19774614 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:20099005-20099188 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:22557184-22557367 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:22608909-22608726 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:24320589-24320410 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 48

Conread position: 12-195
Cow position: chrX:24758014-24757831 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:24966952-24967135 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:25575645-25575826 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 129, 88

Conread position: 12-195
Cow position: chrX:26617238-26617055 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:26754102-26753919 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:26974593-26974776 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:28555752-28555569 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:28588653-28588836 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:29024132-29024312 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 125, 138

Conread position: 12-195
Cow position: chrX:29877498-29877315 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:29913022-29913205 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:30538469-30538286 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:30899705-30899521 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 12-195
Cow position: chrX:30950211-30950394 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:30965784-30965967 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:30981482-30981299 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:34095244-34095427 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:36195775-36195958 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:36820549-36820366 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:37061108-37060925 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:39954855-39954672 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:41790757-41790579 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 99, 0

Conread position: 12-195
Cow position: chrX:43767854-43767671 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-195
Cow position: chrX:47386248-47386066 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 129, 71

Conread position: 12-195
Cow position: chrX:48247150-48246971 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 67, 39

Conread position: 12-196
Cow position: chrX:1518756-1518572 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 131, 142

Conread position: 12-196
Cow position: chrX:7809320-7809135 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 48

Conread position: 12-196
Cow position: chrX:39288485-39288301 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 12-200
Cow position: chrX:671326-671138 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 108, 127

Conread position: 12-200
Cow position: chrX:1576580-1576392 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-200
Cow position: chrX:5408738-5408926 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 12-200
Cow position: chrX:5423383-5423195 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 12-200
Cow position: chrX:9168931-9168743 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 12-200
Cow position: chrX:11358382-11358194 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 12-200
Cow position: chrX:11672464-11672652 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 12-200
Cow position: chrX:11715779-11715591 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 12-200
Cow position: chrX:12458381-12458569 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 12-200
Cow position: chrX:12466178-12466365 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 163, 0

Conread position: 12-200
Cow position: chrX:12776303-12776115 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 12-200
Cow position: chrX:13385090-13385278 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 12-200
Cow position: chrX:13971544-13971356 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 12-200
Cow position: chrX:17980278-17980466 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-200
Cow position: chrX:20032148-20031960 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 12-200
Cow position: chrX:22115599-22115411 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 84, 104

Conread position: 12-200
Cow position: chrX:26506258-26506073 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 65

Conread position: 12-200
Cow position: chrX:30139101-30138913 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 129, 109

Conread position: 12-200
Cow position: chrX:30196980-30197168 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-200
Cow position: chrX:34333517-34333329 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 12-200
Cow position: chrX:34761749-34761937 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-200
Cow position: chrX:36240078-36240266 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 12-200
Cow position: chrX:36364902-36365090 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 85

Conread position: 12-200
Cow position: chrX:37764514-37764326 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 12-200
Cow position: chrX:37772751-37772562 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 178, 0

Conread position: 12-200
Cow position: chrX:38014777-38014965 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 12-200
Cow position: chrX:41433737-41433553 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 132, 0

Conread position: 12-200
Cow position: chrX:45467537-45467348 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 12-200
Cow position: chrX:48328704-48328516 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 12-203
Cow position: chrX:24447484-24447675 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 12-206
Cow position: chrX:2104088-2104282 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 12-206
Cow position: chrX:2151249-2151052 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 178, 0

Conread position: 12-206
Cow position: chrX:38051749-38051553 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 166, 0

Conread position: 12-208
Cow position: chrX:7444767-7444963 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 12-208
Cow position: chrX:7509820-7510016 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 12-208
Cow position: chrX:27240419-27240617 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 140

Conread position: 12-208
Cow position: chrX:27498451-27498647 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 129, 124

Conread position: 12-208
Cow position: chrX:28559152-28558957 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 192, 64

Conread position: 12-208
Cow position: chrX:44851774-44851974 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 122, 14

Conread position: 12-209
Cow position: chrX:28024946-28025145 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 165, 0

Conread position: 12-211
Cow position: chrX:32747341-32747546 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 161
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 124, 0

Conread position: 12-212
Cow position: chrX:2274600-2274798 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:2417801-2417603 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:2812727-2812531 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 12-212
Cow position: chrX:5112873-5112675 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:5306282-5306480 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:5320035-5319835 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 93, 191

Conread position: 12-212
Cow position: chrX:5599295-5599097 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:5739530-5739332 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:5866829-5867026 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 165, 0

Conread position: 12-212
Cow position: chrX:5892911-5893109 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:6196071-6195873 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:6454378-6454576 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:6652389-6652191 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:6828818-6829017 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 193

Conread position: 12-212
Cow position: chrX:6869880-6869681 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 185, 0

Conread position: 12-212
Cow position: chrX:7118961-7118763 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:7311676-7311874 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:7742774-7742576 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:9593452-9593254 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:10351544-10351742 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:10444732-10444533 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 79, 193

Conread position: 12-212
Cow position: chrX:10495916-10496114 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:10932355-10932553 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 69, 65

Conread position: 12-212
Cow position: chrX:10992301-10992499 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:11145655-11145457 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 118, 127

Conread position: 12-212
Cow position: chrX:11566597-11566795 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:11663861-11664059 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:11725584-11725382 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 120

Conread position: 12-212
Cow position: chrX:12001464-12001266 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:12145778-12145975 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 78, 0

Conread position: 12-212
Cow position: chrX:12360572-12360770 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:12850815-12851013 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 108, 127

Conread position: 12-212
Cow position: chrX:13091478-13091281 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 12-212
Cow position: chrX:13396569-13396371 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:13447953-13448151 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:14122068-14121871 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 12-212
Cow position: chrX:14462996-14463194 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:15346286-15346088 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:15504974-15505172 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 108, 127

Conread position: 12-212
Cow position: chrX:15577958-15577760 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:15620849-15620650 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 190, 0

Conread position: 12-212
Cow position: chrX:16279332-16279530 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:16285892-16286090 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:16735207-16735405 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:17783182-17783380 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 65

Conread position: 12-212
Cow position: chrX:17995142-17995340 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:18024722-18024920 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:19022626-19022428 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:19674331-19674529 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:20617114-20616916 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:21768487-21768685 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:23109445-23109640 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 12-212
Cow position: chrX:23235513-23235711 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:24413713-24413911 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:24509550-24509748 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:24809287-24809090 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 144, 0

Conread position: 12-212
Cow position: chrX:25276816-25276618 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:26759886-26759688 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:27469971-27469773 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:28058112-28057914 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:29083808-29084001 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 12-212
Cow position: chrX:29226159-29226357 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:29356270-29356468 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:29508466-29508658 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 12-212
Cow position: chrX:29903425-29903624 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 176, 193

Conread position: 12-212
Cow position: chrX:30822267-30822465 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:30837056-30837254 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:30863516-30863318 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:31605367-31605565 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:31814206-31814008 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:31978161-31977965 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 12-212
Cow position: chrX:32010714-32010912 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:32039160-32038962 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:32331314-32331508 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 12-212
Cow position: chrX:34413459-34413657 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:34519409-34519607 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:35803497-35803695 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:36535052-36534854 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:37497764-37497566 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:37816271-37816469 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:38442645-38442843 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:39667510-39667312 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:39731196-39731394 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:40591369-40591567 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:42120986-42121184 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:42591408-42591606 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:45237149-45237347 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:45263385-45263188 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 163, 0

Conread position: 12-212
Cow position: chrX:47318089-47318287 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:47608097-47608295 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 192, 0

Conread position: 12-212
Cow position: chrX:48165206-48165404 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 108, 127

Conread position: 12-213
Cow position: chrX:19196835-19196636 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 70, 63

Conread position: 12-213
Cow position: chrX:44168626-44168427 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 192, 0

Conread position: 12-226
Cow position: chrX:13070918-13070707 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 118, 24

Conread position: 12-226
Cow position: chrX:15091083-15090872 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 202, 19

Conread position: 12-226
Cow position: chrX:41488482-41488270 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 202, 192

Conread position: 12-228
Cow position: chrX:7486547-7486761 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 65

Conread position: 12-240
Cow position: chrX:9252491-9252264 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 174, 77

Conread position: 12-241
Cow position: chrX:1781588-1781815 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 202, 192

Conread position: 12-241
Cow position: chrX:22078010-22078236 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 202, 192

Conread position: 12-241
Cow position: chrX:29049658-29049876 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 176
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 75, 0

Conread position: 12-242
Cow position: chrX:20376653-20376878 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 70, 0

Conread position: 12-242
Cow position: chrX:20653076-20653312 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 205

Conread position: 12-242
Cow position: chrX:34009433-34009663 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 155
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 111, 125

Conread position: 12-242
Cow position: chrX:36692918-36693148 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 12-243
Cow position: chrX:160349-160119 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 108, 64

Conread position: 12-243
Cow position: chrX:17271606-17271371 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 174, 0

Conread position: 12-244
Cow position: chrX:22873080-22873317 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 12-244
Cow position: chrX:29010416-29010650 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 132, 138

Conread position: 12-244
Cow position: chrX:37299275-37299515 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 24, 113

Conread position: 12-246
Cow position: chrX:19290455-19290684 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 227, 116

Conread position: 12-246
Cow position: chrX:27318898-27319138 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 117

Conread position: 12-259
Cow position: chrX:45430335-45430086 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 85, 229

Conread position: 12-262
Cow position: chrX:48224503-48224250 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 190, 0

Conread position: 12-266
Cow position: chrX:8782427-8782686 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 129, 116

Conread position: 12-268
Cow position: chrX:22821097-22821358 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 124, 109

Conread position: 12-272
Cow position: chrX:13177774-13177522 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 97, 51

Conread position: 12-273
Cow position: chrX:11820042-11820300 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 129, 7

Conread position: 12-273
Cow position: chrX:35268573-35268826 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 133, 0

Conread position: 12-279
Cow position: chrX:18451396-18451128 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 202, 192

Conread position: 12-279
Cow position: chrX:47170523-47170795 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 129, 110

Conread position: 12-283
Cow position: chrX:26619678-26619407 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 183, 17

Conread position: 12-287
Cow position: chrX:2559277-2559001 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 184
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 174, 65

Conread position: 12-287
Cow position: chrX:3464393-3464115 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 149, 176

Conread position: 12-287
Cow position: chrX:7806061-7806338 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 109, 47

Conread position: 12-287
Cow position: chrX:8641471-8641750 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 214, 0

Conread position: 12-287
Cow position: chrX:15531472-15531192 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 174, 0

Conread position: 12-287
Cow position: chrX:18223096-18223375 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 73, 65

Conread position: 12-287
Cow position: chrX:18656122-18655842 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 197, 247

Conread position: 12-287
Cow position: chrX:23047463-23047741 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 184
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 185, 0

Conread position: 12-287
Cow position: chrX:26229825-26229551 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 68, 95

Conread position: 12-287
Cow position: chrX:34285381-34285100 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 54, 0

Conread position: 12-287
Cow position: chrX:44557762-44558042 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 70, 64

Conread position: 12-288
Cow position: chrX:7551112-7550832 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 202, 109

Conread position: 12-288
Cow position: chrX:11806333-11806054 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 163, 32

Conread position: 12-296
Cow position: chrX:6543939-6544222 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 227

Conread position: 12-296
Cow position: chrX:15590189-15589903 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 184
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 129, 116

Conread position: 12-296
Cow position: chrX:16783177-16783459 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 242, 114

Conread position: 12-296
Cow position: chrX:20801460-20801742 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 23, 91

Conread position: 12-296
Cow position: chrX:24424709-24424421 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 85, 45

Conread position: 12-296
Cow position: chrX:25337860-25338152 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 85, 0

Conread position: 12-296
Cow position: chrX:27404262-27403974 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 192
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 178, 37

Conread position: 12-296
Cow position: chrX:32171199-32170920 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 192, 166

Conread position: 12-296
Cow position: chrX:38007085-38006797 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 231

Conread position: 12-296
Cow position: chrX:45932687-45932976 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 184
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 205, 0

Conread position: 12-296
Cow position: chrX:48287757-48287482 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 204, 109

Conread position: 12-298
Cow position: chrX:4343432-4343722 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 157, 282

Conread position: 12-298
Cow position: chrX:6372864-6373153 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 192
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 214, 281

Conread position: 12-298
Cow position: chrX:19473478-19473187 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 195
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 121, 283

Conread position: 12-298
Cow position: chrX:30686913-30686620 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 195
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 161, 285

Conread position: 12-298
Cow position: chrX:35533534-35533824 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 174, 282

Conread position: 12-298
Cow position: chrX:38230584-38230294 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 189, 282

Conread position: 12-298
Cow position: chrX:43979301-43979593 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 157, 178

Conread position: 12-298
Cow position: chrX:44387673-44387958 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 193
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 189, 63

Conread position: 12-298
Cow position: chrX:44980354-44980064 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 194
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 120, 134

Conread position: 12-298
Cow position: chrX:45903861-45904151 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 192
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 189, 282

Conread position: 12-304
Cow position: chrX:5376052-5376353 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 129, 116

Conread position: 12-304
Cow position: chrX:47967283-47967579 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 221
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 176, 78

Conread position: 12-304
Cow position: chrX:48205230-48204938 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 129, 116

Conread position: 12-306
Cow position: chrX:8530223-8530521 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 202, 192

Conread position: 12-306
Cow position: chrX:38218401-38218688 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 185, 64

Conread position: 12-309
Cow position: chrX:28847193-28846898 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 64

Conread position: 12-309
Cow position: chrX:40827064-40826768 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 157

Conread position: 12-310
Cow position: chrX:4633168-4632867 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 53

Conread position: 12-310
Cow position: chrX:9161271-9161569 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 196
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 280, 109

Conread position: 12-310
Cow position: chrX:15545580-15545876 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 113

Conread position: 12-310
Cow position: chrX:30162680-30162981 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 109

Conread position: 12-310
Cow position: chrX:34454357-34454649 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 231, 23

Conread position: 12-312
Cow position: chrX:12249484-12249786 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 167

Conread position: 12-313
Cow position: chrX:3654291-3654596 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 174, 61

Conread position: 12-313
Cow position: chrX:13912762-13913054 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 210
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 109, 193

Conread position: 12-313
Cow position: chrX:28866306-28866017 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 64, 0

Conread position: 12-313
Cow position: chrX:35223985-35224283 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 109

Conread position: 12-314
Cow position: chrX:13785695-13785375 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 75, 192

Conread position: 12-315
Cow position: chrX:8899707-8900017 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 12-315
Cow position: chrX:26626002-26625687 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 89, 292

Conread position: 12-316
Cow position: chrX:31436163-31436466 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 186

Conread position: 12-317
Cow position: chrX:4622271-4621958 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 208
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 174, 0

Conread position: 12-317
Cow position: chrX:10428223-10428535 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 207
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 129, 58

Conread position: 12-317
Cow position: chrX:12115724-12116037 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 78

Conread position: 12-317
Cow position: chrX:12826430-12826738 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 205
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 174, 227

Conread position: 12-317
Cow position: chrX:20582713-20583011 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 192

Conread position: 12-317
Cow position: chrX:40269159-40269479 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 12-320
Cow position: chrX:17055252-17055568 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 203
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 189, 0

Conread position: 12-320
Cow position: chrX:25232269-25232585 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 71, 0

Conread position: 12-320
Cow position: chrX:30543599-30543294 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 218
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 174, 99

Conread position: 12-320
Cow position: chrX:38439157-38439472 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 14

Conread position: 12-321
Cow position: chrX:878686-878388 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 26, 65

Conread position: 12-321
Cow position: chrX:1616368-1616049 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 234

Conread position: 12-321
Cow position: chrX:4044175-4043865 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 72, 123

Conread position: 12-321
Cow position: chrX:5017723-5017419 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 217
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 284, 87

Conread position: 12-321
Cow position: chrX:10412303-10411991 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 120

Conread position: 12-321
Cow position: chrX:31443137-31442836 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 36

Conread position: 12-321
Cow position: chrX:34401681-34401993 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 41

Conread position: 12-321
Cow position: chrX:35288343-35288650 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 211
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 57

Conread position: 12-321
Cow position: chrX:37232094-37232408 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 12-321
Cow position: chrX:38936382-38936692 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 223
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 75, 118

Conread position: 12-321
Cow position: chrX:39546290-39545981 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 205
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 192, 120

Conread position: 12-321
Cow position: chrX:41743596-41743907 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 109

Conread position: 12-321
Cow position: chrX:45412969-45412664 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 224
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 231, 65

Conread position: 12-322
Cow position: chrX:35612861-35612545 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 129, 83

Conread position: 12-322
Cow position: chrX:38963794-38964102 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 65

Conread position: 12-323
Cow position: chrX:8796934-8797251 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 28

Conread position: 12-325
Cow position: chrX:5123678-5123358 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 178, 315

Conread position: 12-325
Cow position: chrX:7571589-7571903 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 192

Conread position: 12-325
Cow position: chrX:11718097-11717789 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 109

Conread position: 12-325
Cow position: chrX:34532214-34532519 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 109, 99

Conread position: 12-325
Cow position: chrX:38227407-38227094 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 176

Conread position: 12-325
Cow position: chrX:40557993-40557681 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 173

Conread position: 12-326
Cow position: chrX:917687-917365 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 232
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 78, 116

Conread position: 12-326
Cow position: chrX:7277611-7277913 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 224
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 48, 66

Conread position: 12-326
Cow position: chrX:34192364-34192672 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 238, 51

Conread position: 12-327
Cow position: chrX:38094842-38094519 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 109

Conread position: 12-374
Cow position: chrX:7695447-7695801 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 253
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 237, 28

Conread position: 12-375
Cow position: chrX:5638485-5638118 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 61

Conread position: 12-375
Cow position: chrX:48248506-48248873 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 239
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 106, 250

Conread position: 12-379
Cow position: chrX:11082931-11082570 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 110

Conread position: 12-380
Cow position: chrX:25035703-25035324 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 259
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 175, 62

Conread position: 12-380
Cow position: chrX:41122755-41123117 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 109

Conread position: 12-388
Cow position: chrX:48243769-48243402 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 243
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 151, 168

Conread position: 13-208
Cow position: chrX:2524046-2523851 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 13-243
Cow position: chrX:40515587-40515808 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 13-287
Cow position: chrX:48370780-48371055 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 117, 202

Conread position: 13-317
Cow position: chrX:32309785-32310093 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 77, 113

Conread position: 13-322
Cow position: chrX:28845528-28845828 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 75, 115

Conread position: 13-380
Cow position: chrX:20340207-20339838 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 223

Conread position: 14-155
Cow position: chrX:38067028-38066887 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 14-167
Cow position: chrX:48423620-48423773 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 14-184
Cow position: chrX:23080978-23081144 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 14-186
Cow position: chrX:43114857-43115027 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 83

Conread position: 14-195
Cow position: chrX:5455024-5454844 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 126
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 121, 78

Conread position: 14-195
Cow position: chrX:30199307-30199126 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 14-196
Cow position: chrX:37575998-37576183 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 8, 139

Conread position: 14-198
Cow position: chrX:12810805-12810991 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 128, 107

Conread position: 14-200
Cow position: chrX:30816584-30816398 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 14-207
Cow position: chrX:43101212-43101405 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 14-212
Cow position: chrX:361768-361572 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 190, 0

Conread position: 14-212
Cow position: chrX:14152530-14152334 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 190, 0

Conread position: 14-212
Cow position: chrX:21344079-21344275 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 190, 0

Conread position: 14-212
Cow position: chrX:26275824-26276020 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 106, 125

Conread position: 14-212
Cow position: chrX:27594495-27594301 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 14-212
Cow position: chrX:30172025-30171829 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 190, 0

Conread position: 14-212
Cow position: chrX:42779441-42779245 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 190, 0

Conread position: 14-235
Cow position: chrX:3396084-3395859 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 115

Conread position: 14-236
Cow position: chrX:32871101-32870876 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 178, 136

Conread position: 14-242
Cow position: chrX:40581677-40581904 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 47

Conread position: 14-244
Cow position: chrX:3161331-3161099 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 107, 0

Conread position: 14-285
Cow position: chrX:17964830-17964562 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 173, 73

Conread position: 14-293
Cow position: chrX:44731285-44731562 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 176, 71

Conread position: 14-296
Cow position: chrX:6655582-6655295 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 187
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 172, 0

Conread position: 14-296
Cow position: chrX:14819397-14819686 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 189
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 116, 126

Conread position: 14-296
Cow position: chrX:31260946-31260660 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 81, 230

Conread position: 14-296
Cow position: chrX:39704390-39704666 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 225, 35

Conread position: 14-298
Cow position: chrX:4869228-4869516 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 190
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 127, 114

Conread position: 14-311
Cow position: chrX:5118798-5118518 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 63

Conread position: 14-316
Cow position: chrX:13648099-13647797 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 236, 171

Conread position: 14-320
Cow position: chrX:15007466-15007155 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 14-321
Cow position: chrX:32743223-32743530 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 194, 224

Conread position: 14-321
Cow position: chrX:33639653-33639968 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 75, 32

Conread position: 14-363
Cow position: chrX:7645943-7646288 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 181

Conread position: 15-186
Cow position: chrX:15304639-15304468 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 129, 135

Conread position: 15-212
Cow position: chrX:42165761-42165956 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 189, 0

Conread position: 15-317
Cow position: chrX:19188622-19188929 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 16-131
Cow position: chrX:11583457-11583344 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 99
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 16-135
Cow position: chrX:38852846-38852962 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 16-163
Cow position: chrX:37129010-37129153 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 16-206
Cow position: chrX:44930321-44930512 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 105, 113

Conread position: 16-212
Cow position: chrX:9154047-9154241 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 188, 0

Conread position: 16-287
Cow position: chrX:45373605-45373329 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 179, 134

Conread position: 16-298
Cow position: chrX:3895289-3895003 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 189
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 185, 278

Conread position: 16-310
Cow position: chrX:23564110-23563806 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 17-195
Cow position: chrX:36677981-36677804 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 50

Conread position: 17-196
Cow position: chrX:19636598-19636775 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 13

Conread position: 17-200
Cow position: chrX:20957709-20957884 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 17-241
Cow position: chrX:45465922-45466154 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 142

Conread position: 17-288
Cow position: chrX:25946146-25945873 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 186, 59

Conread position: 17-320
Cow position: chrX:7350990-7351295 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 59

Conread position: 18-143
Cow position: chrX:170260-170135 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 19-128
Cow position: chrX:14018816-14018925 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-128
Cow position: chrX:47930094-47930205 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 19-195
Cow position: chrX:29169644-29169468 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 19-212
Cow position: chrX:30531342-30531147 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 115, 189

Conread position: 19-307
Cow position: chrX:3154560-3154266 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 195
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 112

Conread position: 19-325
Cow position: chrX:47873651-47873339 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 219
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 122, 117

Conread position: 20-208
Cow position: chrX:47368555-47368370 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 20-321
Cow position: chrX:23061145-23061429 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 101, 0

Conread position: 22-196
Cow position: chrX:4325804-4325630 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 121, 115

Conread position: 23-191
Cow position: chrX:45410349-45410180 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 23-206
Cow position: chrX:48135186-48135005 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 23-212
Cow position: chrX:21011628-21011440 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 54

Conread position: 23-237
Cow position: chrX:11314084-11313870 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 146, 98

Conread position: 23-243
Cow position: chrX:38794419-38794643 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 23-273
Cow position: chrX:24125377-24125124 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 163, 98

Conread position: 23-310
Cow position: chrX:33466311-33466594 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 273, 88

Conread position: 23-321
Cow position: chrX:20709769-20710068 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 206
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 143, 54

Conread position: 23-331
Cow position: chrX:14884270-14883952 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 111

Conread position: 24-167
Cow position: chrX:27019898-27020040 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 24-175
Cow position: chrX:47854684-47854537 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 24-186
Cow position: chrX:5919165-5919327 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 43, 87

Conread position: 24-195
Cow position: chrX:12032666-12032837 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 24-200
Cow position: chrX:30021403-30021227 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 24-207
Cow position: chrX:3372162-3371980 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 24-212
Cow position: chrX:43511115-43511300 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 24-317
Cow position: chrX:45414605-45414309 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 230, 215

Conread position: 24-352
Cow position: chrX:3653458-3653788 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 201

Conread position: 25-244
Cow position: chrX:5047201-5046989 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 146, 111

Conread position: 25-401
Cow position: chrX:42585370-42585006 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 251
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 320, 9

Conread position: 26-206
Cow position: chrX:6038225-6038041 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 96, 113

Conread position: 26-212
Cow position: chrX:24735635-24735819 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 102

Conread position: 27-198
Cow position: chrX:21861977-21861801 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 62, 164

Conread position: 27-324
Cow position: chrX:30133626-30133323 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 170, 128

Conread position: 29-309
Cow position: chrX:33020186-33020467 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 92

Conread position: 30-283
Cow position: chrX:14221784-14222040 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 156, 81

Conread position: 30-325
Cow position: chrX:35273045-35273355 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 88, 221

Conread position: 31-241
Cow position: chrX:41238661-41238455 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 31-317
Cow position: chrX:19015144-19015424 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 152

Conread position: 32-195
Cow position: chrX:35497789-35497952 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 33-195
Cow position: chrX:41886091-41885929 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 33-212
Cow position: chrX:16478606-16478783 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 171, 0

Conread position: 33-272
Cow position: chrX:46606806-46606565 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 154, 92

Conread position: 33-287
Cow position: chrX:754662-754921 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 185, 0

Conread position: 33-296
Cow position: chrX:43983874-43984145 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 182
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 17, 237

Conread position: 34-195
Cow position: chrX:24291977-24291816 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 107, 94

Conread position: 34-304
Cow position: chrX:18194618-18194894 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 154, 0

Conread position: 34-304
Cow position: chrX:23264732-23264454 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 107, 94

Conread position: 34-326
Cow position: chrX:48195337-48195037 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 35-212
Cow position: chrX:24577859-24577684 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 169, 0

Conread position: 38-195
Cow position: chrX:5507385-5507540 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 49

Conread position: 38-251
Cow position: chrX:48675785-48675998 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 41, 202

Conread position: 38-321
Cow position: chrX:25237887-25238165 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 66

Conread position: 39-243
Cow position: chrX:39347076-39346868 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 121, 81

Conread position: 39-296
Cow position: chrX:4269357-4269094 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 102, 32

Conread position: 39-306
Cow position: chrX:44835106-44834830 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 165, 0

Conread position: 40-182
Cow position: chrX:42928071-42927933 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 81, 65

Conread position: 40-208
Cow position: chrX:31556787-31556619 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 116
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 40-243
Cow position: chrX:24193820-24194022 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 161

Conread position: 40-290
Cow position: chrX:22482978-22482725 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 157, 0

Conread position: 40-317
Cow position: chrX:28097837-28098103 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 256, 9

Conread position: 41-321
Cow position: chrX:31294828-31294568 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 255, 49

Conread position: 42-298
Cow position: chrX:29066154-29066410 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 169
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 197, 248

Conread position: 43-229
Cow position: chrX:16808042-16807857 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 162

Conread position: 43-288
Cow position: chrX:46723027-46722775 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 143, 0

Conread position: 43-296
Cow position: chrX:46033004-46032753 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 203, 77

Conread position: 45-272
Cow position: chrX:38102728-38102499 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 96, 74

Conread position: 46-136
Cow position: chrX:13923144-13923234 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 46-212
Cow position: chrX:10293445-10293281 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 158, 0

Conread position: 46-212
Cow position: chrX:17605844-17605680 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 158, 0

Conread position: 46-325
Cow position: chrX:2467597-2467880 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 48

Conread position: 47-317
Cow position: chrX:16762490-16762760 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 74, 40

Conread position: 48-405
Cow position: chrX:37836308-37836669 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 248
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 72, 33

Conread position: 48-422
Cow position: chrX:42874697-42875086 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 73

Conread position: 49-296
Cow position: chrX:9997611-9997368 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 25, 0

Conread position: 49-315
Cow position: chrX:8730799-8731076 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 142, 0

Conread position: 49-321
Cow position: chrX:40647698-40647981 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 174, 78

Conread position: 51-209
Cow position: chrX:47247189-47247029 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 51-317
Cow position: chrX:8925428-8925692 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 69, 25

Conread position: 51-317
Cow position: chrX:26709326-26709600 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 150, 0

Conread position: 52-296
Cow position: chrX:30921908-30922153 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 23

Conread position: 52-310
Cow position: chrX:12017998-12018276 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 128, 135

Conread position: 52-379
Cow position: chrX:35413353-35413671 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 49, 146

Conread position: 53-195
Cow position: chrX:12314078-12314220 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 53-244
Cow position: chrX:16531723-16531912 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 0

Conread position: 54-314
Cow position: chrX:47191670-47191423 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 242, 37

Conread position: 54-379
Cow position: chrX:34270141-34270458 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 225
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 196, 22

Conread position: 56-272
Cow position: chrX:37416348-37416129 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 137, 0

Conread position: 57-321
Cow position: chrX:488218-488487 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 180
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 131, 64

Conread position: 59-316
Cow position: chrX:17725708-17725963 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 184, 62

Conread position: 60-186
Cow position: chrX:45955912-45956037 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 61-314
Cow position: chrX:17541696-17541946 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 81, 60

Conread position: 61-317
Cow position: chrX:10095758-10096021 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 171
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 141, 0

Conread position: 61-317
Cow position: chrX:45404102-45403836 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 126, 0

Conread position: 62-296
Cow position: chrX:40183617-40183376 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 124, 0

Conread position: 67-244
Cow position: chrX:45787393-45787566 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 70-312
Cow position: chrX:20151591-20151836 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 169, 126

Conread position: 70-315
Cow position: chrX:27509279-27509034 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 173, 183

Conread position: 71-317
Cow position: chrX:32020380-32020129 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 172, 246

Conread position: 77-321
Cow position: chrX:678820-678577 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 108, 152

Conread position: 77-325
Cow position: chrX:23497915-23497668 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 219, 44

Conread position: 77-326
Cow position: chrX:41673851-41674110 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 5

Conread position: 78-209
Cow position: chrX:5556082-5555952 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 79-317
Cow position: chrX:28878412-28878177 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 39, 109

Conread position: 79-327
Cow position: chrX:25816146-25815908 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 217, 114

Conread position: 81-263
Cow position: chrX:48536914-48536728 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 60

Conread position: 82-316
Cow position: chrX:27432166-27431924 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 162

Conread position: 87-321
Cow position: chrX:35284375-35284615 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 33, 115

Conread position: 88-314
Cow position: chrX:30963113-30962885 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 161, 107

Conread position: 89-326
Cow position: chrX:45598844-45598602 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 98, 146

Conread position: 90-200
Cow position: chrX:33519378-33519488 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 90-259
Cow position: chrX:42499268-42499096 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 90-290
Cow position: chrX:38642021-38642223 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 96, 31

Conread position: 90-300
Cow position: chrX:2206783-2206579 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 159, 131

Conread position: 90-307
Cow position: chrX:25411601-25411822 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 31

Conread position: 90-309
Cow position: chrX:33493536-33493760 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 96, 42

Conread position: 90-313
Cow position: chrX:27394253-27394035 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 206, 121

Conread position: 90-316
Cow position: chrX:11939163-11938944 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 90-317
Cow position: chrX:16416269-16416499 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 96, 48

Conread position: 90-317
Cow position: chrX:23970150-23970367 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 160, 37

Conread position: 90-320
Cow position: chrX:43049103-43049343 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 90-320
Cow position: chrX:44053019-44053252 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 154
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 206, 0

Conread position: 90-321
Cow position: chrX:30833077-30832854 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 206, 31

Conread position: 90-321
Cow position: chrX:44961508-44961744 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 36

Conread position: 90-325
Cow position: chrX:619247-619007 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 94, 228

Conread position: 90-325
Cow position: chrX:26876120-26875886 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 164, 37

Conread position: 90-325
Cow position: chrX:39938756-39938524 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 114, 27

Conread position: 90-325
Cow position: chrX:41884657-41884414 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 96, 153

Conread position: 90-330
Cow position: chrX:9416932-9416688 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 164, 149

Conread position: 90-331
Cow position: chrX:34543548-34543783 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 154, 73

Conread position: 90-343
Cow position: chrX:21004445-21004698 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 169
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 119, 37

Conread position: 90-378
Cow position: chrX:21672312-21672606 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 202
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 96, 237

Conread position: 90-380
Cow position: chrX:9855061-9855352 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 200
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 96, 204

Conread position: 90-380
Cow position: chrX:23514257-23513959 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 79, 57

Conread position: 90-485
Cow position: chrX:1514643-1514251 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 259
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 103

Conread position: 91-296
Cow position: chrX:19930419-19930618 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 91-315
Cow position: chrX:40035687-40035454 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 40, 15

Conread position: 91-321
Cow position: chrX:17888644-17888424 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 205, 77

Conread position: 91-321
Cow position: chrX:27680165-27680390 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 203, 30

Conread position: 91-321
Cow position: chrX:41167202-41166969 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 158, 36

Conread position: 91-321
Cow position: chrX:42492748-42492523 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 151, 21

Conread position: 91-325
Cow position: chrX:48652965-48652724 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 37

Conread position: 91-375
Cow position: chrX:9635419-9635139 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 230, 148

Conread position: 92-310
Cow position: chrX:27772193-27771979 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 206, 42

Conread position: 92-320
Cow position: chrX:6690485-6690264 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 153, 104

Conread position: 92-325
Cow position: chrX:40116188-40116414 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 158, 34

Conread position: 92-378
Cow position: chrX:4768513-4768793 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 206, 89

Conread position: 92-380
Cow position: chrX:17662834-17662537 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 205
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 105, 265

Conread position: 93-321
Cow position: chrX:15814861-15815080 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 202, 83

Conread position: 93-485
Cow position: chrX:20752027-20752432 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 268
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 152, 23

Conread position: 94-320
Cow position: chrX:22074565-22074789 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 219, 195

Conread position: 95-281
Cow position: chrX:6639890-6640082 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 95-313
Cow position: chrX:47757163-47756941 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 144, 181

Conread position: 95-320
Cow position: chrX:39558582-39558356 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 32, 120

Conread position: 95-321
Cow position: chrX:2383255-2383484 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 36

Conread position: 95-326
Cow position: chrX:7513282-7513511 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 159, 40

Conread position: 95-375
Cow position: chrX:38549214-38549498 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 91, 155

Conread position: 96-317
Cow position: chrX:17231501-17231724 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 143, 108

Conread position: 96-327
Cow position: chrX:36975716-36975950 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 149, 172

Conread position: 97-306
Cow position: chrX:877255-877053 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 148, 30

Conread position: 97-321
Cow position: chrX:13382092-13382325 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 97-322
Cow position: chrX:6278738-6278504 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 89, 0

Conread position: 97-325
Cow position: chrX:48010362-48010600 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 97-326
Cow position: chrX:42339168-42338947 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 118, 0

Conread position: 98-380
Cow position: chrX:14900952-14900675 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 185
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 265, 29

Conread position: 99-316
Cow position: chrX:42381330-42381112 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 143, 115

Conread position: 99-321
Cow position: chrX:7721754-7721984 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 89, 167

Conread position: 99-372
Cow position: chrX:35542661-35542942 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 190
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 87, 238

Conread position: 100-272
Cow position: chrX:18812029-18812196 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 100-345
Cow position: chrX:13265849-13265605 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 150, 113

Conread position: 102-311
Cow position: chrX:48684450-48684239 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 137, 94

Conread position: 102-320
Cow position: chrX:11856202-11856422 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 144, 46

Conread position: 104-324
Cow position: chrX:29509669-29509442 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 140, 0

Conread position: 105-310
Cow position: chrX:17042466-17042677 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 106-296
Cow position: chrX:16541899-16541704 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 82, 20

Conread position: 107-317
Cow position: chrX:46073044-46072829 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 113

Conread position: 108-317
Cow position: chrX:23091660-23091857 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 188, 131

Conread position: 108-375
Cow position: chrX:11633457-11633733 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 123, 258

Conread position: 109-375
Cow position: chrX:29602053-29601777 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 17

Conread position: 117-306
Cow position: chrX:27174782-27174977 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 118-376
Cow position: chrX:29542430-29542163 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 132, 121

Conread position: 121-321
Cow position: chrX:45845887-45846094 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 121-393
Cow position: chrX:3579739-3580013 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 123, 16

Conread position: 123-322
Cow position: chrX:46587611-46587816 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 116, 0

Conread position: 126-356
Cow position: chrX:17908487-17908257 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 170, 64

Conread position: 130-330
Cow position: chrX:1499470-1499669 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 66

Conread position: 140-296
Cow position: chrX:23785464-23785630 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 140-321
Cow position: chrX:43730404-43730227 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 140-322
Cow position: chrX:1505523-1505705 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 99, 24

Conread position: 140-326
Cow position: chrX:33000714-33000903 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 87

Conread position: 140-380
Cow position: chrX:36961446-36961695 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 190

Conread position: 141-325
Cow position: chrX:42235722-42235529 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 147-338
Cow position: chrX:31256685-31256876 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 151, 57

Conread position: 147-379
Cow position: chrX:32820847-32821080 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 158
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 102, 11

Conread position: 172-375
Cow position: chrX:27227966-27228177 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 67, 166

Show alignments to all cow chromosomes.