Cow genome map

Conread name: Ss1.1-Pig4-TMW8022I07.5

Conread position: 4-124
Cow position: chr14:28987918-28988040 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 5-124
Cow position: chr14:11508016-11507893 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 5-124
Cow position: chr14:20712456-20712333 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 6-116
Cow position: chr14:18345502-18345393 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 94

Conread position: 6-117
Cow position: chr14:22583367-22583480 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 6-119
Cow position: chr14:18904380-18904264 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 6-120
Cow position: chr14:2833299-2833187 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 6-120
Cow position: chr14:35381816-35381933 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 6-122
Cow position: chr14:20666793-20666678 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 6-122
Cow position: chr14:23080294-23080178 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 94

Conread position: 6-122
Cow position: chr14:39778981-39779100 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 6-123
Cow position: chr14:7959993-7960107 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 6-123
Cow position: chr14:9029457-9029335 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 6-123
Cow position: chr14:11981881-11982001 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 6-123
Cow position: chr14:14621956-14621838 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 12

Conread position: 6-124
Cow position: chr14:5501924-5501803 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 6-124
Cow position: chr14:6599726-6599604 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 96

Conread position: 6-124
Cow position: chr14:7270788-7270667 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr14:11468953-11468832 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 6-124
Cow position: chr14:12249968-12249848 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr14:13385601-13385722 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 6-124
Cow position: chr14:13465030-13464915 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 6-124
Cow position: chr14:14326876-14326755 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 6-124
Cow position: chr14:15054758-15054645 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 92

Conread position: 6-124
Cow position: chr14:16342212-16342092 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr14:18811891-18811770 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 6-124
Cow position: chr14:20600609-20600730 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr14:20640396-20640272 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr14:21284858-21284975 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 93

Conread position: 6-124
Cow position: chr14:21538253-21538133 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr14:22381327-22381206 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr14:22989262-22989383 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr14:24992040-24992161 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr14:29300137-29300016 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr14:31734625-31734507 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 89

Conread position: 6-124
Cow position: chr14:33326165-33326046 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 20

Conread position: 6-124
Cow position: chr14:34395440-34395322 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 79, 47

Conread position: 6-124
Cow position: chr14:36167161-36167284 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 6-124
Cow position: chr14:36437258-36437135 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr14:37151413-37151291 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 6-124
Cow position: chr14:37156096-37156217 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr14:37883691-37883568 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr14:38811585-38811705 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 6-124
Cow position: chr14:40230409-40230288 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr14:41749535-41749415 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 6-124
Cow position: chr14:41756487-41756607 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr14:43452952-43452831 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr14:44382971-44382851 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 33

Conread position: 6-124
Cow position: chr14:46965786-46965909 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 6-124
Cow position: chr14:47584421-47584300 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr14:48427304-48427425 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr14:49543834-49543952 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-126
Cow position: chr14:8754554-8754675 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 81

Conread position: 6-126
Cow position: chr14:13006734-13006855 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 6-126
Cow position: chr14:16237278-16237156 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 6-126
Cow position: chr14:25695608-25695731 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 6-126
Cow position: chr14:28708260-28708376 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 6-126
Cow position: chr14:33538698-33538578 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 6-128
Cow position: chr14:31130161-31130036 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 7-120
Cow position: chr14:48492555-48492440 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 7-122
Cow position: chr14:34096366-34096249 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 7-124
Cow position: chr14:7317065-7317185 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 103
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 7-124
Cow position: chr14:18309081-18308961 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 7-124
Cow position: chr14:19207093-19207213 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 101
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 7-124
Cow position: chr14:40346949-40346829 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 7-124
Cow position: chr14:41479430-41479310 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 8-106
Cow position: chr14:18485011-18484910 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 8-122
Cow position: chr14:19222112-19222227 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 10

Conread position: 8-124
Cow position: chr14:106345-106227 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 40, 104

Conread position: 8-124
Cow position: chr14:6490474-6490353 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 8-124
Cow position: chr14:13723369-13723251 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 89

Conread position: 8-124
Cow position: chr14:17755788-17755908 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 8-124
Cow position: chr14:21201601-21201480 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 8-124
Cow position: chr14:25682175-25682294 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 8-124
Cow position: chr14:27848430-27848549 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 8-124
Cow position: chr14:41809422-41809303 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 8-124
Cow position: chr14:47507334-47507453 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 9-124
Cow position: chr14:27791761-27791879 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 9-124
Cow position: chr14:37727220-37727101 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 9-124
Cow position: chr14:48517288-48517406 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 10-124
Cow position: chr14:43249817-43249933 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 65

Conread position: 12-124
Cow position: chr14:17013742-17013857 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 13-124
Cow position: chr14:20300387-20300273 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 98
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 21-124
Cow position: chr14:45046422-45046316 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 125-277
Cow position: chr14:32784129-32784282 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 138, 0

Conread position: 149-300
Cow position: chr14:11577032-11576883 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 142, 36

Conread position: 302-630
Cow position: chr14:6842766-6843098 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 60, 28

Conread position: 311-613
Cow position: chr14:6434886-6434584 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 41, 13

Conread position: 328-577
Cow position: chr14:14347445-14347190 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 133

Conread position: 348-610
Cow position: chr14:21235140-21234878 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 53

Conread position: 371-567
Cow position: chr14:43180012-43180214 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 6

Conread position: 402-639
Cow position: chr14:6407110-6406866 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 67

Show alignments to all cow chromosomes.