Cow genome map

Conread name: Ss1.1-Pig4-TMW8022I07.5

Conread position: 1-124
Cow position: chr15:13515641-13515764 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-122
Cow position: chr15:8962273-8962390 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 95

Conread position: 5-124
Cow position: chr15:33306381-33306501 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 84

Conread position: 6-95
Cow position: chr15:29340336-29340429 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 6-107
Cow position: chr15:16307690-16307794 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 93
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 6-110
Cow position: chr15:14871020-14871132 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 6-119
Cow position: chr15:10336029-10336141 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 6-122
Cow position: chr15:5658437-5658555 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 6-122
Cow position: chr15:20534176-20534057 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 72

Conread position: 6-122
Cow position: chr15:46611193-46611311 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 6-123
Cow position: chr15:17196419-17196539 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr15:237002-237123 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr15:276028-276145 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 6-124
Cow position: chr15:3873986-3874107 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 6-124
Cow position: chr15:4138411-4138530 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 68

Conread position: 6-124
Cow position: chr15:5727912-5728033 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr15:6082368-6082248 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 84

Conread position: 6-124
Cow position: chr15:9267789-9267668 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr15:10442317-10442196 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr15:12199752-12199631 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr15:13669629-13669509 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 106
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 50

Conread position: 6-124
Cow position: chr15:16543190-16543069 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 6-124
Cow position: chr15:18284516-18284637 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr15:20422485-20422369 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 6-124
Cow position: chr15:20459026-20458905 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr15:20472271-20472151 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 18

Conread position: 6-124
Cow position: chr15:22751725-22751843 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 91

Conread position: 6-124
Cow position: chr15:24968066-24968182 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 6-124
Cow position: chr15:25584815-25584694 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 6-124
Cow position: chr15:28039030-28039147 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 6-124
Cow position: chr15:28924492-28924374 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 6-124
Cow position: chr15:32979760-32979639 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr15:34104540-34104661 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr15:42528889-42529009 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr15:42536273-42536393 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr15:44256751-44256872 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 6-124
Cow position: chr15:47990488-47990367 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr15:52482553-52482434 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 6-124
Cow position: chr15:53164296-53164414 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-126
Cow position: chr15:33662768-33662891 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 6-128
Cow position: chr15:41087588-41087464 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 7-120
Cow position: chr15:5691986-5692102 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 7-122
Cow position: chr15:16583436-16583319 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 7-124
Cow position: chr15:14505701-14505822 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 7-124
Cow position: chr15:20486942-20486818 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 7-124
Cow position: chr15:21388890-21388776 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 91

Conread position: 7-124
Cow position: chr15:25618304-25618187 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-126
Cow position: chr15:17870020-17869897 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 7-127
Cow position: chr15:5234729-5234607 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 8-120
Cow position: chr15:20370187-20370079 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 8-120
Cow position: chr15:52148494-52148609 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 8-123
Cow position: chr15:5498753-5498635 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 8-124
Cow position: chr15:7191985-7191867 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 8-124
Cow position: chr15:10230992-10230872 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 8-124
Cow position: chr15:21832148-21832029 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 8-124
Cow position: chr15:23531001-23531118 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 28

Conread position: 8-124
Cow position: chr15:23865753-23865634 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 8-124
Cow position: chr15:24822099-24821988 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 8-124
Cow position: chr15:26079095-26078975 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 8-124
Cow position: chr15:30800158-30800278 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 8-124
Cow position: chr15:31202282-31202400 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 44, 68

Conread position: 8-124
Cow position: chr15:45479283-45479402 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 8-140
Cow position: chr15:26911803-26911669 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 9-124
Cow position: chr15:10450625-10450510 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-124
Cow position: chr15:16112682-16112797 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 78

Conread position: 9-124
Cow position: chr15:33976416-33976298 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 10-123
Cow position: chr15:37238150-37238266 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 10-124
Cow position: chr15:4485421-4485539 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 10-124
Cow position: chr15:17477097-17477214 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 10-124
Cow position: chr15:23486895-23486778 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 18-124
Cow position: chr15:13077203-13077094 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 30-124
Cow position: chr15:33455968-33455871 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 125-307
Cow position: chr15:28099145-28098963 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 138, 65

Conread position: 126-278
Cow position: chr15:49483660-49483509 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 141-277
Cow position: chr15:36846167-36846303 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 146-291
Cow position: chr15:11908934-11909076 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 191-296
Cow position: chr15:18784732-18784627 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 294-610
Cow position: chr15:9047025-9046702 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 222
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 76, 30

Conread position: 302-610
Cow position: chr15:9133933-9133628 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 215
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 59

Conread position: 303-610
Cow position: chr15:19822106-19822417 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 214
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 30, 123

Conread position: 311-643
Cow position: chr15:28036536-28036877 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 233
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 87

Conread position: 349-556
Cow position: chr15:37715114-37714901 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 26, 44

Conread position: 372-552
Cow position: chr15:35139522-35139334 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 98

Conread position: 373-641
Cow position: chr15:19707535-19707807 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 97

Conread position: 374-567
Cow position: chr15:29814462-29814273 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 83, 46

Conread position: 441-578
Cow position: chr15:39293386-39293527 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 24

Show alignments to all cow chromosomes.