Cow genome map

Conread name: Ss1.1-Pig4-TMW8022I07.5

Conread position: 2-124
Cow position: chr17:5730783-5730659 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 3-124
Cow position: chr17:20234086-20233962 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 4-124
Cow position: chr17:18490391-18490271 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 97

Conread position: 4-124
Cow position: chr17:29084061-29083941 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 84, 49

Conread position: 5-124
Cow position: chr17:1783752-1783871 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-100
Cow position: chr17:11664735-11664829 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-109
Cow position: chr17:1026135-1026029 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 6-110
Cow position: chr17:21003975-21004082 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 6-111
Cow position: chr17:17059295-17059188 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 94
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 6-118
Cow position: chr17:20090765-20090877 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 91

Conread position: 6-122
Cow position: chr17:21495230-21495114 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 30

Conread position: 6-122
Cow position: chr17:24550026-24549907 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 6-123
Cow position: chr17:20874175-20874058 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 92

Conread position: 6-124
Cow position: chr17:1080858-1080739 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 18

Conread position: 6-124
Cow position: chr17:1295715-1295836 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 6-124
Cow position: chr17:1410387-1410511 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr17:2275131-2275009 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 6-124
Cow position: chr17:3153916-3154034 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 94

Conread position: 6-124
Cow position: chr17:3306723-3306604 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 102

Conread position: 6-124
Cow position: chr17:5224259-5224138 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr17:8644892-8644772 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 12

Conread position: 6-124
Cow position: chr17:9565165-9565044 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr17:11386370-11386251 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 6-124
Cow position: chr17:11618436-11618315 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 6-124
Cow position: chr17:11912844-11912965 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr17:18860863-18860983 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 107
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 41, 66

Conread position: 6-124
Cow position: chr17:20022661-20022782 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr17:20129533-20129413 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 101
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr17:20800672-20800551 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 6-124
Cow position: chr17:20993183-20993305 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr17:21039131-21039013 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 25

Conread position: 6-124
Cow position: chr17:21973277-21973396 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 6-124
Cow position: chr17:22790952-22790833 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 33

Conread position: 6-124
Cow position: chr17:23337157-23337279 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr17:23517312-23517432 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr17:25168166-25168048 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 6-124
Cow position: chr17:25541957-25542077 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 6-124
Cow position: chr17:25815465-25815343 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr17:26764869-26764752 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 84

Conread position: 6-124
Cow position: chr17:26818597-26818717 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 102
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr17:27795503-27795383 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 44, 12

Conread position: 6-124
Cow position: chr17:29715330-29715451 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr17:32027606-32027727 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 6-124
Cow position: chr17:34079242-34079363 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 6-124
Cow position: chr17:37163671-37163794 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr17:38829939-38829819 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 99

Conread position: 6-124
Cow position: chr17:40802668-40802547 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 6-124
Cow position: chr17:43527833-43527717 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 6-124
Cow position: chr17:43717457-43717573 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 58

Conread position: 6-125
Cow position: chr17:26230795-26230673 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 6-126
Cow position: chr17:5000720-5000841 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 6-126
Cow position: chr17:26183078-26182955 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 6-126
Cow position: chr17:27679388-27679511 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 106
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 6-126
Cow position: chr17:41029809-41029684 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 6-137
Cow position: chr17:25796484-25796618 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 6-140
Cow position: chr17:16117572-16117710 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 104

Conread position: 7-109
Cow position: chr17:12216222-12216329 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 7-124
Cow position: chr17:1493301-1493421 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 17

Conread position: 7-124
Cow position: chr17:2729942-2730063 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 7-124
Cow position: chr17:3683803-3683922 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 80

Conread position: 7-124
Cow position: chr17:6936808-6936929 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 7-124
Cow position: chr17:15664524-15664404 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 101
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 7-124
Cow position: chr17:20269457-20269347 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 7-124
Cow position: chr17:20889229-20889110 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 7-124
Cow position: chr17:21335843-21335963 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 7-124
Cow position: chr17:21874461-21874581 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 7-124
Cow position: chr17:32989347-32989228 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 7-124
Cow position: chr17:32993759-32993878 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 7-124
Cow position: chr17:38832897-38832777 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 7-124
Cow position: chr17:40406159-40406042 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 93

Conread position: 7-124
Cow position: chr17:40421523-40421404 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 8-122
Cow position: chr17:2270622-2270505 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 8-124
Cow position: chr17:3498810-3498929 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 8-124
Cow position: chr17:6155895-6155776 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 8-124
Cow position: chr17:6997943-6997825 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 8-124
Cow position: chr17:24553858-24553739 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 8-124
Cow position: chr17:25344086-25344205 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 8-124
Cow position: chr17:33288800-33288919 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 9-124
Cow position: chr17:11839551-11839436 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr17:22773481-22773598 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 14

Conread position: 10-124
Cow position: chr17:25608654-25608771 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 10-124
Cow position: chr17:42347369-42347486 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 18-122
Cow position: chr17:3387138-3387034 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 82

Conread position: 18-124
Cow position: chr17:17951087-17950978 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 19-124
Cow position: chr17:16446585-16446694 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 20-124
Cow position: chr17:17222184-17222079 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 125-307
Cow position: chr17:21718900-21718721 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 164, 56

Conread position: 328-610
Cow position: chr17:15905364-15905643 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 182, 110

Conread position: 377-639
Cow position: chr17:22501606-22501339 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 94

Show alignments to all cow chromosomes.