Cow genome map

Conread name: Ss1.1-Pig4-TMW8022I07.5

Conread position: 6-95
Cow position: chr19:17664444-17664353 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 81
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 6-109
Cow position: chr19:20693301-20693197 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 6-110
Cow position: chr19:35741962-35741854 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 6-111
Cow position: chr19:27104550-27104446 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 6-118
Cow position: chr19:38756102-38755986 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 6-119
Cow position: chr19:33932337-33932455 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 6-120
Cow position: chr19:1355417-1355300 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 6-120
Cow position: chr19:16096748-16096865 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 6-121
Cow position: chr19:38340172-38340285 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 44, 92

Conread position: 6-121
Cow position: chr19:39104207-39104320 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 6-121
Cow position: chr19:52196356-52196237 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 6-122
Cow position: chr19:1901197-1901316 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 6-122
Cow position: chr19:4340103-4340222 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 6-122
Cow position: chr19:23785993-23785874 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 104
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 39, 114

Conread position: 6-122
Cow position: chr19:38596419-38596300 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 6-122
Cow position: chr19:42240487-42240605 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 41, 112

Conread position: 6-122
Cow position: chr19:46822243-46822124 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 6-123
Cow position: chr19:15437913-15437793 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 6-123
Cow position: chr19:22765421-22765301 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 101
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 6-123
Cow position: chr19:53657703-53657585 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 60

Conread position: 6-124
Cow position: chr19:1580779-1580897 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 10

Conread position: 6-124
Cow position: chr19:2577379-2577259 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 12

Conread position: 6-124
Cow position: chr19:3222604-3222486 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 6-124
Cow position: chr19:4445816-4445937 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr19:6516064-6515944 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr19:6688201-6688322 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr19:7543226-7543105 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 104
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr19:8033544-8033422 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr19:8375497-8375618 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr19:10786555-10786676 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr19:13755694-13755574 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr19:14573177-14573053 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 6-124
Cow position: chr19:14592854-14592737 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 103
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 43, 93

Conread position: 6-124
Cow position: chr19:14928866-14928989 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 6-124
Cow position: chr19:19490140-19490253 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 102
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 6-124
Cow position: chr19:19499752-19499869 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 6-124
Cow position: chr19:20671097-20671218 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr19:21115111-21114990 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 6-124
Cow position: chr19:21198931-21198810 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr19:21587745-21587623 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 6-124
Cow position: chr19:23393773-23393653 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr19:24062101-24061980 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 106
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr19:24669564-24669685 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr19:25168489-25168608 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 6-124
Cow position: chr19:25955038-25955156 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 94

Conread position: 6-124
Cow position: chr19:25999436-25999318 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 94

Conread position: 6-124
Cow position: chr19:27348458-27348578 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr19:28014281-28014164 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 24

Conread position: 6-124
Cow position: chr19:30533745-30533625 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr19:32457446-32457326 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 46, 112

Conread position: 6-124
Cow position: chr19:34283128-34283009 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 85

Conread position: 6-124
Cow position: chr19:34287615-34287496 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 106
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 33

Conread position: 6-124
Cow position: chr19:34654774-34654892 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 78

Conread position: 6-124
Cow position: chr19:35018443-35018562 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr19:36125388-36125271 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 6-124
Cow position: chr19:36176549-36176423 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 6-124
Cow position: chr19:37333333-37333210 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 6-124
Cow position: chr19:37633548-37633669 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr19:37647035-37647158 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 6-124
Cow position: chr19:39057049-39056928 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr19:39078132-39078011 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 6-124
Cow position: chr19:39245704-39245583 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 104
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr19:39751285-39751168 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 73

Conread position: 6-124
Cow position: chr19:42777704-42777582 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 104
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr19:46693957-46693833 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr19:46918645-46918524 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 108
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 6-126
Cow position: chr19:31595103-31594980 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 6-127
Cow position: chr19:17273916-17274036 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 75

Conread position: 6-135
Cow position: chr19:27180455-27180584 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 84

Conread position: 7-124
Cow position: chr19:4587917-4588037 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 7-124
Cow position: chr19:10697935-10697816 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 7-124
Cow position: chr19:12036701-12036821 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 7-124
Cow position: chr19:15137260-15137144 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 43

Conread position: 7-124
Cow position: chr19:25655582-25655702 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 40, 112

Conread position: 7-124
Cow position: chr19:34955894-34956014 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 104
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 7-124
Cow position: chr19:37502864-37502973 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 103
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 7-124
Cow position: chr19:39697874-39697756 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 7-124
Cow position: chr19:43431518-43431635 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 93

Conread position: 7-124
Cow position: chr19:47727768-47727885 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 7-126
Cow position: chr19:25696404-25696524 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 103
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 7-126
Cow position: chr19:52773373-52773495 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 7-127
Cow position: chr19:42726158-42726034 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 8-106
Cow position: chr19:4252170-4252271 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 8-122
Cow position: chr19:25041525-25041643 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 8-124
Cow position: chr19:4195530-4195412 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 8-124
Cow position: chr19:7978759-7978875 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 48, 36

Conread position: 8-124
Cow position: chr19:11487803-11487922 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 8-124
Cow position: chr19:14253436-14253317 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 8-124
Cow position: chr19:14472976-14473095 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 8-124
Cow position: chr19:21092581-21092463 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 8-124
Cow position: chr19:32177908-32178026 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 72

Conread position: 8-124
Cow position: chr19:38392600-38392480 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 102
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 8-124
Cow position: chr19:39576768-39576886 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 8-126
Cow position: chr19:23005563-23005684 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 104
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 44, 0

Conread position: 9-124
Cow position: chr19:6891976-6892094 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 9-137
Cow position: chr19:47859491-47859623 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 13-124
Cow position: chr19:254994-255108 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 18-124
Cow position: chr19:729938-730047 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 19-124
Cow position: chr19:19963832-19963724 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 125-277
Cow position: chr19:40127121-40126971 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 125-282
Cow position: chr19:34420454-34420609 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 138, 59

Conread position: 125-288
Cow position: chr19:23378721-23378881 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 132-289
Cow position: chr19:46822761-46822915 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 348-615
Cow position: chr19:32495681-32495954 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 234

Conread position: 359-613
Cow position: chr19:4966561-4966825 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 8, 24

Show alignments to all cow chromosomes.