Cow genome map

Conread name: Ss1.1-Pig4-TMW8022I07.5

Conread position: 5-124
Cow position: chr20:31927599-31927721 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 6-109
Cow position: chr20:19328257-19328152 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 6-121
Cow position: chr20:5950775-5950889 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 93

Conread position: 6-122
Cow position: chr20:3502152-3502033 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 6-122
Cow position: chr20:6258206-6258324 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 102
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 6-122
Cow position: chr20:15761090-15761208 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 82

Conread position: 6-122
Cow position: chr20:18185437-18185318 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 6-122
Cow position: chr20:32847211-32847091 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 6-123
Cow position: chr20:24521609-24521489 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 103
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 6-123
Cow position: chr20:38935355-38935474 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr20:3034951-3034834 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 41, 93

Conread position: 6-124
Cow position: chr20:3599532-3599655 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 6-124
Cow position: chr20:4621481-4621603 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 114

Conread position: 6-124
Cow position: chr20:4945387-4945508 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr20:5104577-5104697 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 6-124
Cow position: chr20:5702603-5702485 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 41, 83

Conread position: 6-124
Cow position: chr20:5998806-5998931 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr20:6501657-6501536 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr20:7426331-7426453 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr20:7710352-7710470 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-124
Cow position: chr20:8429599-8429485 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 6-124
Cow position: chr20:9014490-9014611 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 6-124
Cow position: chr20:9412350-9412233 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 6-124
Cow position: chr20:10178252-10178373 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 42, 92

Conread position: 6-124
Cow position: chr20:10235710-10235589 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 105
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr20:10913477-10913597 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 33

Conread position: 6-124
Cow position: chr20:12334240-12334119 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr20:12582089-12582210 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr20:12839913-12839795 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 71

Conread position: 6-124
Cow position: chr20:12996150-12996272 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr20:13269481-13269362 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 6-124
Cow position: chr20:13752098-13751983 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 78

Conread position: 6-124
Cow position: chr20:13967400-13967522 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr20:18100274-18100156 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 42, 24

Conread position: 6-124
Cow position: chr20:18320937-18321057 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 97

Conread position: 6-124
Cow position: chr20:21019423-21019302 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr20:25009785-25009903 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 94

Conread position: 6-124
Cow position: chr20:26058212-26058331 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr20:31147950-31147833 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 6-124
Cow position: chr20:31261590-31261470 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 6-124
Cow position: chr20:31746767-31746886 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 6-124
Cow position: chr20:32548825-32548705 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr20:32636707-32636827 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 116

Conread position: 6-124
Cow position: chr20:32866488-32866609 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr20:35113389-35113268 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr20:35145867-35145744 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr20:36779873-36779994 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 6-124
Cow position: chr20:40303990-40304111 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 6-125
Cow position: chr20:11550225-11550102 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 6-126
Cow position: chr20:7132206-7132083 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 6-126
Cow position: chr20:7756771-7756892 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 81

Conread position: 6-126
Cow position: chr20:18399618-18399496 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 6-126
Cow position: chr20:19313207-19313330 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 46, 73

Conread position: 6-126
Cow position: chr20:19363504-19363627 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 6-126
Cow position: chr20:33363378-33363251 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 7-120
Cow position: chr20:15582179-15582294 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 68

Conread position: 7-122
Cow position: chr20:6240672-6240790 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 7-124
Cow position: chr20:14718884-14719003 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 7-124
Cow position: chr20:17251565-17251448 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 7-124
Cow position: chr20:27339923-27339800 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 7-124
Cow position: chr20:33170018-33170134 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 92

Conread position: 7-124
Cow position: chr20:35797462-35797343 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 7-126
Cow position: chr20:9473757-9473878 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 111

Conread position: 8-111
Cow position: chr20:3607098-3607201 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 8-118
Cow position: chr20:10208658-10208545 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 8-122
Cow position: chr20:20203072-20202955 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 8-122
Cow position: chr20:22064926-22064812 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 59, 52

Conread position: 8-124
Cow position: chr20:11614187-11614306 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 8-124
Cow position: chr20:12441836-12441954 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 8-124
Cow position: chr20:24069666-24069552 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 31

Conread position: 8-124
Cow position: chr20:29990621-29990740 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 8-126
Cow position: chr20:20353059-20353179 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 31

Conread position: 8-128
Cow position: chr20:7806706-7806829 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 0

Conread position: 9-124
Cow position: chr20:20197000-20196882 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 9-126
Cow position: chr20:19459792-19459908 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 18-124
Cow position: chr20:13267587-13267696 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 125-277
Cow position: chr20:14980406-14980259 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 126-272
Cow position: chr20:12126204-12126058 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 361-579
Cow position: chr20:8907691-8907472 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 51, 87

Conread position: 473-725
Cow position: chr20:6008771-6009027 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 96

Show alignments to all cow chromosomes.