Cow genome map

Conread name: Ss1.1-Pig4-TMW8022I07.5

Conread position: 5-124
Cow position: chr28:16246449-16246565 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 5-124
Cow position: chr28:18790832-18790712 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 42, 97

Conread position: 5-126
Cow position: chr28:6971519-6971641 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 7

Conread position: 6-113
Cow position: chr28:5837933-5837823 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 6-117
Cow position: chr28:7228565-7228677 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 6-120
Cow position: chr28:21844776-21844660 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 6-122
Cow position: chr28:10534110-10534225 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 30

Conread position: 6-122
Cow position: chr28:10616131-10616248 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 84

Conread position: 6-122
Cow position: chr28:12758688-12758805 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 6-123
Cow position: chr28:1315971-1316089 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 75

Conread position: 6-123
Cow position: chr28:3256614-3256502 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 6-123
Cow position: chr28:14997882-14997765 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 26

Conread position: 6-123
Cow position: chr28:21868272-21868152 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 6-123
Cow position: chr28:31110185-31110301 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 105

Conread position: 6-124
Cow position: chr28:2279844-2279966 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr28:3024091-3024209 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 85

Conread position: 6-124
Cow position: chr28:3740673-3740552 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr28:3751139-3751019 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 104
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr28:3914530-3914410 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr28:4308078-4308198 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 6-124
Cow position: chr28:4536291-4536170 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr28:4587916-4587796 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 11

Conread position: 6-124
Cow position: chr28:4880443-4880564 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 106
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 6-124
Cow position: chr28:5805345-5805219 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 6-124
Cow position: chr28:5826769-5826648 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr28:7372431-7372551 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 27

Conread position: 6-124
Cow position: chr28:7751480-7751601 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr28:7882622-7882504 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 94

Conread position: 6-124
Cow position: chr28:8372291-8372171 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 86

Conread position: 6-124
Cow position: chr28:8787367-8787250 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 6-124
Cow position: chr28:10888484-10888363 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr28:11752324-11752445 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr28:12430430-12430309 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 49, 68

Conread position: 6-124
Cow position: chr28:12964397-12964277 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 46, 11

Conread position: 6-124
Cow position: chr28:13356765-13356882 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 93

Conread position: 6-124
Cow position: chr28:13371348-13371468 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 6-124
Cow position: chr28:13474126-13474007 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 70

Conread position: 6-124
Cow position: chr28:14742621-14742500 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr28:14933782-14933662 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 6-124
Cow position: chr28:16085145-16085025 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 69

Conread position: 6-124
Cow position: chr28:16441207-16441090 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 12

Conread position: 6-124
Cow position: chr28:16925390-16925511 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr28:17738258-17738379 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 6-124
Cow position: chr28:19222325-19222445 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 102
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 6-124
Cow position: chr28:19222777-19222894 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 72

Conread position: 6-124
Cow position: chr28:21355045-21354924 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 6-124
Cow position: chr28:21598433-21598553 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 6-124
Cow position: chr28:22332369-22332250 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 105
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 46, 23

Conread position: 6-124
Cow position: chr28:22371858-22371976 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 6-124
Cow position: chr28:30327261-30327384 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 6-124
Cow position: chr28:31223774-31223894 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 6-126
Cow position: chr28:4282671-4282794 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 6-127
Cow position: chr28:7684858-7684980 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 26

Conread position: 6-128
Cow position: chr28:23840029-23839908 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 82

Conread position: 7-106
Cow position: chr28:7698163-7698263 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 45, 62

Conread position: 7-124
Cow position: chr28:3144072-3144187 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 91

Conread position: 7-124
Cow position: chr28:3202957-3202839 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 7-124
Cow position: chr28:5904555-5904436 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 7-124
Cow position: chr28:7549243-7549362 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 7-124
Cow position: chr28:9426522-9426642 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 7-124
Cow position: chr28:11585388-11585508 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 104
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 7-124
Cow position: chr28:16211277-16211397 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 104
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 7-124
Cow position: chr28:16364149-16364271 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 104
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 7-124
Cow position: chr28:25056792-25056671 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 8-107
Cow position: chr28:30303377-30303476 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 48, 23

Conread position: 8-121
Cow position: chr28:25128164-25128280 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 8-122
Cow position: chr28:25727196-25727083 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 8-124
Cow position: chr28:2801061-2800946 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 40, 91

Conread position: 8-124
Cow position: chr28:20124604-20124489 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 78

Conread position: 8-124
Cow position: chr28:23480443-23480561 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 83

Conread position: 8-124
Cow position: chr28:23616221-23616102 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 9-122
Cow position: chr28:16215075-16215189 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 10-124
Cow position: chr28:10980957-10980840 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 10-124
Cow position: chr28:25701045-25701160 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 99, 19

Conread position: 11-126
Cow position: chr28:15601078-15600962 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 12-124
Cow position: chr28:8972787-8972672 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 100
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 13-111
Cow position: chr28:15063526-15063626 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 13-124
Cow position: chr28:8935536-8935426 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 18-98
Cow position: chr28:11866887-11866967 (view UCSC Genome Browser custom track)
Alignm length: 81
Alignm identity: 72
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 18-124
Cow position: chr28:3000805-3000911 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 18-124
Cow position: chr28:11759728-11759837 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 19-124
Cow position: chr28:10589221-10589329 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 20-124
Cow position: chr28:16879461-16879565 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 27, 80

Conread position: 125-303
Cow position: chr28:7350715-7350886 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 175, 60

Conread position: 128-277
Cow position: chr28:8787603-8787749 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 159-282
Cow position: chr28:17739917-17740038 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 164-319
Cow position: chr28:12592589-12592432 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 27, 105

Conread position: 189-302
Cow position: chr28:8347856-8347967 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 301-613
Cow position: chr28:20543508-20543196 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 164

Conread position: 348-610
Cow position: chr28:28900957-28900707 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 24, 97

Conread position: 361-639
Cow position: chr28:12684906-12684633 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 104

Conread position: 371-593
Cow position: chr28:345383-345153 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 100

Conread position: 385-575
Cow position: chr28:25774863-25774675 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 72

Show alignments to all cow chromosomes.