Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8022K06.5 |
| Conread position: | 1-218 |
| Cow position: | chr18:53602341-53602121 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 123, 15 |
| Conread position: | 208-350 |
| Cow position: | chr18:53602107-53601965 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 98, 53 |
| Conread position: | 346-477 |
| Cow position: | chr18:40070897-40071028 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 346-477 |
| Cow position: | chr18:40249138-40249269 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 346-477 |
| Cow position: | chr18:53589592-53589461 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 346-477 |
| Cow position: | chr18:53601240-53601109 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 119 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 346-477 |
| Cow position: | chr18:56492608-56492739 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 346-514 |
| Cow position: | chr18:53569627-53569792 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 347-477 |
| Cow position: | chr18:53496849-53496979 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 347-477 |
| Cow position: | chr18:53523915-53524045 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 347-477 |
| Cow position: | chr18:55026311-55026441 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 122, 126 |
| Conread position: | 347-477 |
| Cow position: | chr18:55077000-55076871 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 347-477 |
| Cow position: | chr18:55521511-55521641 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 476-611 |
| Cow position: | chr18:53600276-53600146 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 608-780 |
| Cow position: | chr18:53599541-53599369 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 608-948 |
| Cow position: | chr18:40250566-40250903 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 150 |
| Conread position: | 966-1236 |
| Cow position: | chr18:53599166-53598891 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 149, 17 |
Show alignments to all cow chromosomes.