Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8022O19.3 |
| Conread position: | 1-306 |
| Cow position: | chr10:51210857-51210554 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 167, 23 |
| Conread position: | 1-394 |
| Cow position: | chr10:6662688-6663077 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 149, 32 |
| Conread position: | 2-304 |
| Cow position: | chr10:43263027-43263332 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 66, 13 |
| Conread position: | 4-495 |
| Cow position: | chr10:14334938-14335441 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 318 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 64, 167 |
| Conread position: | 15-418 |
| Cow position: | chr10:10158789-10159209 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 114 |
| Conread position: | 507-740 |
| Cow position: | chr10:43060427-43060662 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 534-742 |
| Cow position: | chr10:48208017-48208228 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 47, 30 |
| Conread position: | 550-738 |
| Cow position: | chr10:30708512-30708704 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 91 |
| Conread position: | 566-744 |
| Cow position: | chr10:2711129-2711310 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 578-744 |
| Cow position: | chr10:30357886-30358050 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 108, 35 |
| Conread position: | 581-727 |
| Cow position: | chr10:767200-767348 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 105, 21 |
| Conread position: | 583-738 |
| Cow position: | chr10:62629918-62629765 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 103, 11 |
| Conread position: | 588-744 |
| Cow position: | chr10:67051474-67051319 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 24 |
| Conread position: | 589-729 |
| Cow position: | chr10:27224311-27224172 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 120 |
| Conread position: | 598-744 |
| Cow position: | chr10:52132139-52131997 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 88, 49 |
| Conread position: | 599-736 |
| Cow position: | chr10:22455760-22455629 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 599-742 |
| Cow position: | chr10:35182263-35182120 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 87, 20 |
| Conread position: | 599-744 |
| Cow position: | chr10:23879584-23879727 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 107 |
| Conread position: | 599-744 |
| Cow position: | chr10:68203516-68203656 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 87, 49 |
| Conread position: | 600-742 |
| Cow position: | chr10:37428112-37428255 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 85, 55 |
| Conread position: | 601-720 |
| Cow position: | chr10:53374733-53374853 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 601-744 |
| Cow position: | chr10:60244188-60244045 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 602-735 |
| Cow position: | chr10:46010142-46010276 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-735 |
| Cow position: | chr10:55874313-55874183 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 105 |
| Conread position: | 602-741 |
| Cow position: | chr10:3318452-3318312 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-742 |
| Cow position: | chr10:25536606-25536465 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-744 |
| Cow position: | chr10:12199590-12199450 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 71 |
| Conread position: | 602-744 |
| Cow position: | chr10:24609358-24609215 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 602-744 |
| Cow position: | chr10:30320982-30320842 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 125 |
| Conread position: | 602-744 |
| Cow position: | chr10:33995424-33995569 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-744 |
| Cow position: | chr10:37665016-37665159 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 84, 33 |
| Conread position: | 603-744 |
| Cow position: | chr10:4605380-4605521 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 127 |
| Conread position: | 603-744 |
| Cow position: | chr10:5421807-5421949 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 603-744 |
| Cow position: | chr10:45195936-45195795 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 40, 127 |
| Conread position: | 604-744 |
| Cow position: | chr10:16668773-16668914 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 605-744 |
| Cow position: | chr10:18863438-18863300 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 81, 104 |
| Conread position: | 614-742 |
| Cow position: | chr10:63621313-63621440 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 628-744 |
| Cow position: | chr10:31220709-31220591 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.