Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8022O19.3 |
| Conread position: | 1-253 |
| Cow position: | chr12:5369652-5369397 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-254 |
| Cow position: | chr12:21289833-21289579 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 199, 242 |
| Conread position: | 1-500 |
| Cow position: | chr12:7864030-7864550 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 340 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 62, 117 |
| Conread position: | 566-742 |
| Cow position: | chr12:29758892-29759069 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 589-736 |
| Cow position: | chr12:27718385-27718239 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 95, 19 |
| Conread position: | 595-742 |
| Cow position: | chr12:2837695-2837842 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 85, 93 |
| Conread position: | 598-744 |
| Cow position: | chr12:8467630-8467777 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 599-744 |
| Cow position: | chr12:5896506-5896652 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 602-740 |
| Cow position: | chr12:11187788-11187650 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 97 |
| Conread position: | 602-742 |
| Cow position: | chr12:20226822-20226962 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 80, 60 |
| Conread position: | 602-742 |
| Cow position: | chr12:33350892-33350753 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 84, 102 |
| Conread position: | 602-744 |
| Cow position: | chr12:10161388-10161531 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 55 |
| Conread position: | 602-744 |
| Cow position: | chr12:33277059-33277202 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-744 |
| Cow position: | chr12:34476154-34476014 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 82, 106 |
| Conread position: | 602-744 |
| Cow position: | chr12:39710183-39710040 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-744 |
| Cow position: | chr12:42854323-42854187 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 603-738 |
| Cow position: | chr12:12709634-12709766 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 97 |
| Conread position: | 603-744 |
| Cow position: | chr12:11306081-11306220 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 83, 25 |
| Conread position: | 603-744 |
| Cow position: | chr12:27111429-27111291 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 70 |
| Conread position: | 605-744 |
| Cow position: | chr12:23499372-23499233 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 85, 65 |
| Conread position: | 607-744 |
| Cow position: | chr12:28214645-28214508 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 5 |
| Conread position: | 618-744 |
| Cow position: | chr12:25514642-25514515 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.