Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8022O19.3 |
| Conread position: | 1-283 |
| Cow position: | chr13:47276771-47276497 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 253, 31 |
| Conread position: | 9-420 |
| Cow position: | chr13:34020119-34020547 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 277 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 146, 35 |
| Conread position: | 26-254 |
| Cow position: | chr13:47682115-47681888 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 32 |
| Conread position: | 77-523 |
| Cow position: | chr13:41598828-41598363 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 302 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 31, 38 |
| Conread position: | 543-723 |
| Cow position: | chr13:20496297-20496476 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 143, 36 |
| Conread position: | 559-742 |
| Cow position: | chr13:2416697-2416512 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 15, 114 |
| Conread position: | 578-729 |
| Cow position: | chr13:39488217-39488069 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 108, 20 |
| Conread position: | 598-721 |
| Cow position: | chr13:17406129-17406007 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 87, 54 |
| Conread position: | 598-734 |
| Cow position: | chr13:33503149-33503014 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 88, 21 |
| Conread position: | 598-743 |
| Cow position: | chr13:51177762-51177616 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 599-742 |
| Cow position: | chr13:45497869-45497730 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 599-744 |
| Cow position: | chr13:4796436-4796293 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 68 |
| Conread position: | 599-744 |
| Cow position: | chr13:15490130-15489985 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 87, 30 |
| Conread position: | 601-742 |
| Cow position: | chr13:34885586-34885444 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 601-744 |
| Cow position: | chr13:26034295-26034444 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 28, 99 |
| Conread position: | 601-744 |
| Cow position: | chr13:55407271-55407130 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 87, 99 |
| Conread position: | 602-741 |
| Cow position: | chr13:14079844-14079979 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 25 |
| Conread position: | 602-744 |
| Cow position: | chr13:14708976-14708831 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 9, 76 |
| Conread position: | 602-744 |
| Cow position: | chr13:20876481-20876626 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 602-744 |
| Cow position: | chr13:22194013-22193874 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 84, 121 |
| Conread position: | 602-744 |
| Cow position: | chr13:27796003-27795860 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-744 |
| Cow position: | chr13:34264503-34264642 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-744 |
| Cow position: | chr13:38361690-38361830 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 87, 100 |
| Conread position: | 602-744 |
| Cow position: | chr13:48580386-48580529 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 602-744 |
| Cow position: | chr13:57746456-57746311 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 603-744 |
| Cow position: | chr13:12214085-12213943 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 604-729 |
| Cow position: | chr13:25877709-25877583 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 605-744 |
| Cow position: | chr13:18839668-18839533 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 614-741 |
| Cow position: | chr13:33240110-33239983 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 78, 61 |
Show alignments to all cow chromosomes.