Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8022O19.3 |
| Conread position: | 1-254 |
| Cow position: | chr15:7850304-7850551 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 99 |
| Conread position: | 1-263 |
| Cow position: | chr15:5207386-5207124 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 2-304 |
| Cow position: | chr15:33315859-33316164 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 68, 36 |
| Conread position: | 3-601 |
| Cow position: | chr15:21476931-21477535 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 371 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 126, 67 |
| Conread position: | 4-212 |
| Cow position: | chr15:21930281-21930491 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 59, 94 |
| Conread position: | 4-412 |
| Cow position: | chr15:52716449-52716027 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 274 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 64, 119 |
| Conread position: | 13-254 |
| Cow position: | chr15:20916176-20916420 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 41-532 |
| Cow position: | chr15:47158885-47159382 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 327 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 564-738 |
| Cow position: | chr15:21417646-21417466 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 570-744 |
| Cow position: | chr15:39809803-39809628 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 19, 33 |
| Conread position: | 582-742 |
| Cow position: | chr15:49272216-49272054 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 582-744 |
| Cow position: | chr15:21182281-21182119 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 19, 137 |
| Conread position: | 592-738 |
| Cow position: | chr15:13081595-13081449 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 94, 20 |
| Conread position: | 592-742 |
| Cow position: | chr15:53713116-53712962 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 594-744 |
| Cow position: | chr15:35067205-35067054 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 598-744 |
| Cow position: | chr15:30570410-30570263 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 599-744 |
| Cow position: | chr15:5912116-5912262 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 599-744 |
| Cow position: | chr15:11998024-11997879 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 10, 26 |
| Conread position: | 599-744 |
| Cow position: | chr15:16989760-16989616 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 599-744 |
| Cow position: | chr15:37633633-37633488 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 82, 115 |
| Conread position: | 602-736 |
| Cow position: | chr15:23266040-23265908 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 84, 101 |
| Conread position: | 602-736 |
| Cow position: | chr15:28607906-28608040 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 602-744 |
| Cow position: | chr15:583109-582966 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 84, 108 |
| Conread position: | 602-744 |
| Cow position: | chr15:1992922-1992779 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-744 |
| Cow position: | chr15:4622511-4622649 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 84, 106 |
| Conread position: | 602-744 |
| Cow position: | chr15:16669159-16669298 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 84, 27 |
| Conread position: | 602-744 |
| Cow position: | chr15:17642459-17642321 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 84, 42 |
| Conread position: | 602-744 |
| Cow position: | chr15:25683963-25683820 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-744 |
| Cow position: | chr15:36277930-36278071 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 84, 35 |
| Conread position: | 602-744 |
| Cow position: | chr15:37491470-37491606 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 602-744 |
| Cow position: | chr15:41807276-41807417 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 84, 71 |
| Conread position: | 602-744 |
| Cow position: | chr15:52132105-52131962 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 603-736 |
| Cow position: | chr15:52869082-52868948 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 603-738 |
| Cow position: | chr15:21802804-21802668 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 603-744 |
| Cow position: | chr15:7443663-7443805 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 607-744 |
| Cow position: | chr15:16971887-16972025 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 608-738 |
| Cow position: | chr15:51637162-51637293 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 613-744 |
| Cow position: | chr15:11287131-11287263 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 614-741 |
| Cow position: | chr15:9075574-9075450 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 72, 59 |
| Conread position: | 624-744 |
| Cow position: | chr15:26594205-26594326 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 629-744 |
| Cow position: | chr15:10581643-10581531 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 629-744 |
| Cow position: | chr15:12283403-12283287 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
Show alignments to all cow chromosomes.