Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8022O19.3 |
| Conread position: | 1-262 |
| Cow position: | chr18:25961487-25961750 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 67, 46 |
| Conread position: | 1-295 |
| Cow position: | chr18:17197478-17197774 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 3-549 |
| Cow position: | chr18:20693227-20693781 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 353 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 64, 113 |
| Conread position: | 5-299 |
| Cow position: | chr18:39078282-39077985 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 63, 212 |
| Conread position: | 22-407 |
| Cow position: | chr18:14421065-14420665 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 16 |
| Conread position: | 590-742 |
| Cow position: | chr18:24663873-24664025 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 96, 18 |
| Conread position: | 593-738 |
| Cow position: | chr18:32371552-32371694 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 93, 9 |
| Conread position: | 593-744 |
| Cow position: | chr18:32861224-32861071 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 597-744 |
| Cow position: | chr18:16259834-16259686 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 598-738 |
| Cow position: | chr18:50881057-50880911 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 599-738 |
| Cow position: | chr18:35470996-35471136 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 599-742 |
| Cow position: | chr18:49436918-49436774 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 600-742 |
| Cow position: | chr18:28086143-28086001 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 602-737 |
| Cow position: | chr18:32286784-32286651 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 35, 84 |
| Conread position: | 602-738 |
| Cow position: | chr18:53047494-53047626 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 84, 27 |
| Conread position: | 602-741 |
| Cow position: | chr18:1701146-1701006 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-744 |
| Cow position: | chr18:39474703-39474846 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-744 |
| Cow position: | chr18:52871172-52871029 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 603-738 |
| Cow position: | chr18:1196033-1195906 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 604-744 |
| Cow position: | chr18:27405446-27405306 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 82, 73 |
| Conread position: | 614-744 |
| Cow position: | chr18:36456590-36456459 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
Show alignments to all cow chromosomes.