Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8022O19.3 |
| Conread position: | 1-212 |
| Cow position: | chr19:38061382-38061168 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 44, 34 |
| Conread position: | 1-213 |
| Cow position: | chr19:29140904-29140695 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 202, 63 |
| Conread position: | 1-251 |
| Cow position: | chr19:15915183-15915430 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 38 |
| Conread position: | 1-403 |
| Cow position: | chr19:36263951-36264359 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 138, 40 |
| Conread position: | 2-306 |
| Cow position: | chr19:43058022-43057715 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 64, 127 |
| Conread position: | 4-304 |
| Cow position: | chr19:17966908-17966606 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 151, 79 |
| Conread position: | 15-425 |
| Cow position: | chr19:25173569-25174000 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 53, 175 |
| Conread position: | 86-306 |
| Cow position: | chr19:5725845-5725622 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 117, 68 |
| Conread position: | 561-743 |
| Cow position: | chr19:30880446-30880261 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 584-741 |
| Cow position: | chr19:3082703-3082547 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 101, 120 |
| Conread position: | 588-743 |
| Cow position: | chr19:17282365-17282520 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 104 |
| Conread position: | 596-738 |
| Cow position: | chr19:17260955-17260812 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 65 |
| Conread position: | 599-744 |
| Cow position: | chr19:21023563-21023415 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 599-744 |
| Cow position: | chr19:30051422-30051565 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 108 |
| Conread position: | 600-744 |
| Cow position: | chr19:14533891-14534036 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 602-740 |
| Cow position: | chr19:39299312-39299445 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 602-741 |
| Cow position: | chr19:28605767-28605906 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 84, 63 |
| Conread position: | 602-741 |
| Cow position: | chr19:33955346-33955205 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-742 |
| Cow position: | chr19:28560224-28560369 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 84, 26 |
| Conread position: | 602-742 |
| Cow position: | chr19:33590307-33590166 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-742 |
| Cow position: | chr19:36388355-36388495 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 84, 101 |
| Conread position: | 602-744 |
| Cow position: | chr19:6478228-6478371 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 602-744 |
| Cow position: | chr19:12477961-12478104 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-744 |
| Cow position: | chr19:41504554-41504411 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 603-742 |
| Cow position: | chr19:30747005-30746863 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 603-744 |
| Cow position: | chr19:6362870-6362730 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 83, 41 |
| Conread position: | 604-744 |
| Cow position: | chr19:30385353-30385215 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 82, 49 |
| Conread position: | 614-742 |
| Cow position: | chr19:35826975-35826845 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.