Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8022O19.3 |
| Conread position: | 1-304 |
| Cow position: | chr2:37682493-37682188 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 56, 122 |
| Conread position: | 1-421 |
| Cow position: | chr2:26070512-26070951 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 225 |
| Conread position: | 2-188 |
| Cow position: | chr2:65255928-65256116 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 2-273 |
| Cow position: | chr2:19077194-19076915 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 62, 225 |
| Conread position: | 4-495 |
| Cow position: | chr2:3501850-3502354 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 349 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 152, 71 |
| Conread position: | 23-584 |
| Cow position: | chr2:70798118-70797567 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 370 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 40, 133 |
| Conread position: | 51-244 |
| Cow position: | chr2:32385418-32385613 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 176 |
| Conread position: | 99-330 |
| Cow position: | chr2:40827424-40827184 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 56, 129 |
| Conread position: | 536-744 |
| Cow position: | chr2:72599479-72599271 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 72, 35 |
| Conread position: | 541-741 |
| Cow position: | chr2:13685246-13685056 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 558-744 |
| Cow position: | chr2:18274024-18274209 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 18, 34 |
| Conread position: | 560-740 |
| Cow position: | chr2:52183588-52183407 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 571-726 |
| Cow position: | chr2:18700966-18701113 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 25, 57 |
| Conread position: | 573-742 |
| Cow position: | chr2:46130304-46130472 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 113, 151 |
| Conread position: | 582-741 |
| Cow position: | chr2:36213733-36213893 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 71 |
| Conread position: | 582-744 |
| Cow position: | chr2:38805733-38805896 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 9, 21 |
| Conread position: | 591-734 |
| Cow position: | chr2:37155400-37155541 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 95, 21 |
| Conread position: | 597-736 |
| Cow position: | chr2:74387523-74387664 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 597-743 |
| Cow position: | chr2:62463389-62463536 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 597-744 |
| Cow position: | chr2:11737003-11736855 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 597-744 |
| Cow position: | chr2:12910792-12910644 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 598-736 |
| Cow position: | chr2:19750932-19750797 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 88, 80 |
| Conread position: | 598-744 |
| Cow position: | chr2:44197523-44197668 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 601-738 |
| Cow position: | chr2:12776978-12777116 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 46, 18 |
| Conread position: | 601-742 |
| Cow position: | chr2:31420600-31420452 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 602-717 |
| Cow position: | chr2:45500957-45501072 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 107 |
| Conread position: | 602-725 |
| Cow position: | chr2:30906235-30906360 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-738 |
| Cow position: | chr2:20534030-20534168 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 89, 37 |
| Conread position: | 602-738 |
| Cow position: | chr2:52347178-52347315 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 19 |
| Conread position: | 602-740 |
| Cow position: | chr2:7778889-7779023 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 83, 107 |
| Conread position: | 602-741 |
| Cow position: | chr2:7365626-7365761 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 46 |
| Conread position: | 602-741 |
| Cow position: | chr2:56822735-56822873 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 602-742 |
| Cow position: | chr2:25112730-25112590 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 87, 73 |
| Conread position: | 602-742 |
| Cow position: | chr2:53280979-53280837 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 79, 10 |
| Conread position: | 602-742 |
| Cow position: | chr2:59592407-59592548 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 602-742 |
| Cow position: | chr2:82827781-82827922 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-744 |
| Cow position: | chr2:14037126-14037264 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 84, 40 |
| Conread position: | 602-744 |
| Cow position: | chr2:16522198-16522056 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 84, 33 |
| Conread position: | 602-744 |
| Cow position: | chr2:21697128-21697266 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-744 |
| Cow position: | chr2:23062324-23062465 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 84, 105 |
| Conread position: | 602-744 |
| Cow position: | chr2:33790884-33791024 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 84, 101 |
| Conread position: | 602-744 |
| Cow position: | chr2:71121837-71121694 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 603-744 |
| Cow position: | chr2:63287558-63287698 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 83, 105 |
| Conread position: | 604-744 |
| Cow position: | chr2:43344690-43344831 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 607-742 |
| Cow position: | chr2:13048800-13048664 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 610-744 |
| Cow position: | chr2:40370189-40370316 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 622-744 |
| Cow position: | chr2:39412225-39412108 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 637-744 |
| Cow position: | chr2:73204869-73204977 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 660-744 |
| Cow position: | chr2:18249075-18249160 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 76 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.