Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8022O19.3 |
| Conread position: | 1-201 |
| Cow position: | chr24:39448716-39448916 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 62, 154 |
| Conread position: | 1-304 |
| Cow position: | chr24:11938998-11939298 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 68, 80 |
| Conread position: | 1-424 |
| Cow position: | chr24:17733122-17732691 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 300 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 154, 66 |
| Conread position: | 20-306 |
| Cow position: | chr24:2637331-2637049 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 70 |
| Conread position: | 559-716 |
| Cow position: | chr24:15476780-15476620 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 25, 152 |
| Conread position: | 583-742 |
| Cow position: | chr24:1295670-1295830 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 23, 13 |
| Conread position: | 590-742 |
| Cow position: | chr24:35835450-35835600 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 127, 89 |
| Conread position: | 597-744 |
| Cow position: | chr24:6177977-6177833 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 89, 10 |
| Conread position: | 598-738 |
| Cow position: | chr24:43491129-43491267 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 105 |
| Conread position: | 598-744 |
| Cow position: | chr24:30899243-30899388 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 8, 31 |
| Conread position: | 599-744 |
| Cow position: | chr24:17417664-17417523 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 599-744 |
| Cow position: | chr24:42338961-42338815 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 602-738 |
| Cow position: | chr24:39384373-39384510 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-742 |
| Cow position: | chr24:42817838-42817702 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 602-744 |
| Cow position: | chr24:19628006-19627855 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 602-744 |
| Cow position: | chr24:36550495-36550634 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 84, 19 |
| Conread position: | 602-744 |
| Cow position: | chr24:44483826-44483966 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 84, 106 |
| Conread position: | 608-736 |
| Cow position: | chr24:37385801-37385930 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 78, 0 |
Show alignments to all cow chromosomes.