Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8022O19.3 |
| Conread position: | 1-262 |
| Cow position: | chr27:30202858-30202588 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 47, 16 |
| Conread position: | 5-509 |
| Cow position: | chr27:16612082-16612598 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 85 |
| Conread position: | 559-744 |
| Cow position: | chr27:4922138-4921954 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 127, 32 |
| Conread position: | 582-744 |
| Cow position: | chr27:3935372-3935203 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-744 |
| Cow position: | chr27:31523894-31524034 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 88, 30 |
| Conread position: | 599-734 |
| Cow position: | chr27:23466515-23466648 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 87, 29 |
| Conread position: | 600-744 |
| Cow position: | chr27:5261071-5261215 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 86, 10 |
| Conread position: | 600-744 |
| Cow position: | chr27:30889531-30889391 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 86, 64 |
| Conread position: | 601-744 |
| Cow position: | chr27:18056861-18057001 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 85, 107 |
| Conread position: | 601-744 |
| Cow position: | chr27:31238625-31238481 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 602-736 |
| Cow position: | chr27:2246362-2246497 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-742 |
| Cow position: | chr27:11021128-11021263 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-742 |
| Cow position: | chr27:17564391-17564533 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 75 |
| Conread position: | 602-744 |
| Cow position: | chr27:18179316-18179175 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 106 |
| Conread position: | 602-744 |
| Cow position: | chr27:18546287-18546426 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 603-744 |
| Cow position: | chr27:12000307-12000165 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 604-744 |
| Cow position: | chr27:9261178-9261319 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 82, 15 |
| Conread position: | 604-744 |
| Cow position: | chr27:15211110-15211257 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 605-744 |
| Cow position: | chr27:7183947-7183806 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
Show alignments to all cow chromosomes.