Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8022O19.3 |
| Conread position: | 1-391 |
| Cow position: | chr28:12180185-12180581 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 77, 140 |
| Conread position: | 532-741 |
| Cow position: | chr28:7592863-7592651 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 11, 73 |
| Conread position: | 564-730 |
| Cow position: | chr28:12384663-12384495 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 25, 41 |
| Conread position: | 589-744 |
| Cow position: | chr28:34346641-34346792 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 595-740 |
| Cow position: | chr28:16241089-16241235 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 600-729 |
| Cow position: | chr28:13935396-13935264 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 9, 37 |
| Conread position: | 601-742 |
| Cow position: | chr28:22614497-22614356 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 85, 138 |
| Conread position: | 602-735 |
| Cow position: | chr28:16251658-16251792 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-735 |
| Cow position: | chr28:22831184-22831051 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 602-738 |
| Cow position: | chr28:11379105-11379239 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 87, 71 |
| Conread position: | 602-738 |
| Cow position: | chr28:22340028-22339894 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 98 |
| Conread position: | 602-742 |
| Cow position: | chr28:6103313-6103172 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 602-742 |
| Cow position: | chr28:11283929-11284071 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 602-742 |
| Cow position: | chr28:27890182-27890324 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 602-744 |
| Cow position: | chr28:5912241-5912383 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 84, 10 |
| Conread position: | 602-744 |
| Cow position: | chr28:25926923-25926780 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 82, 53 |
| Conread position: | 602-744 |
| Cow position: | chr28:26626588-26626726 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 605-738 |
| Cow position: | chr28:16804671-16804805 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 608-729 |
| Cow position: | chr28:5050813-5050692 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.