Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8022O19.3 |
| Conread position: | 1-297 |
| Cow position: | chr29:35972133-35971845 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 154, 37 |
| Conread position: | 5-314 |
| Cow position: | chr29:32983206-32982902 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 71 |
| Conread position: | 22-406 |
| Cow position: | chr29:42102349-42101970 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 37, 16 |
| Conread position: | 32-387 |
| Cow position: | chr29:21519663-21520032 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 267 |
| Conread position: | 552-744 |
| Cow position: | chr29:30920737-30920926 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 134, 57 |
| Conread position: | 598-744 |
| Cow position: | chr29:8890661-8890810 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 599-744 |
| Cow position: | chr29:7738095-7738241 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 600-741 |
| Cow position: | chr29:849680-849538 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 84, 43 |
| Conread position: | 602-740 |
| Cow position: | chr29:40091525-40091664 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-741 |
| Cow position: | chr29:16360215-16360078 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 83, 125 |
| Conread position: | 602-742 |
| Cow position: | chr29:1711635-1711496 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 89, 35 |
| Conread position: | 602-743 |
| Cow position: | chr29:35037326-35037187 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 131, 81 |
| Conread position: | 602-744 |
| Cow position: | chr29:18337954-18338094 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 603-744 |
| Cow position: | chr29:34392401-34392259 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 604-742 |
| Cow position: | chr29:681948-682080 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 604-744 |
| Cow position: | chr29:18361097-18361238 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 604-744 |
| Cow position: | chr29:19252861-19252720 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 82, 40 |
| Conread position: | 604-744 |
| Cow position: | chr29:38387007-38386866 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
Show alignments to all cow chromosomes.