Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8022O19.3 |
| Conread position: | 1-363 |
| Cow position: | chr3:78021326-78020972 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 109, 51 |
| Conread position: | 1-368 |
| Cow position: | chr3:68346362-68346730 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 251 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 94, 12 |
| Conread position: | 1-419 |
| Cow position: | chr3:60082148-60082582 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 288 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 67, 34 |
| Conread position: | 1-450 |
| Cow position: | chr3:64849391-64849847 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 291 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 78, 155 |
| Conread position: | 1-500 |
| Cow position: | chr3:23304760-23305244 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 337 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 31, 49 |
| Conread position: | 5-304 |
| Cow position: | chr3:22960584-22960286 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 159, 16 |
| Conread position: | 9-361 |
| Cow position: | chr3:74226644-74227003 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 59, 65 |
| Conread position: | 92-337 |
| Cow position: | chr3:56140029-56139784 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 206 |
| Conread position: | 133-418 |
| Cow position: | chr3:71238883-71239184 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 31, 37 |
| Conread position: | 536-736 |
| Cow position: | chr3:24532460-24532255 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 559-744 |
| Cow position: | chr3:28707555-28707372 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 32 |
| Conread position: | 576-744 |
| Cow position: | chr3:1339497-1339328 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 11 |
| Conread position: | 581-738 |
| Cow position: | chr3:15091455-15091298 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 105, 13 |
| Conread position: | 589-744 |
| Cow position: | chr3:60854264-60854415 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-743 |
| Cow position: | chr3:52817574-52817429 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 599-744 |
| Cow position: | chr3:12531545-12531692 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 599-744 |
| Cow position: | chr3:60947625-60947771 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 19 |
| Conread position: | 600-736 |
| Cow position: | chr3:43004233-43004367 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 86, 9 |
| Conread position: | 601-744 |
| Cow position: | chr3:5317191-5317335 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 601-744 |
| Cow position: | chr3:23478801-23478656 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 72, 37 |
| Conread position: | 602-732 |
| Cow position: | chr3:77158963-77158833 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 602-735 |
| Cow position: | chr3:45735746-45735610 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 602-736 |
| Cow position: | chr3:8754024-8753889 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-738 |
| Cow position: | chr3:1549880-1549749 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 602-744 |
| Cow position: | chr3:22054067-22054210 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-744 |
| Cow position: | chr3:49414182-49414322 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 84, 109 |
| Conread position: | 602-744 |
| Cow position: | chr3:63334141-63334283 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 79 |
| Conread position: | 602-744 |
| Cow position: | chr3:73154517-73154381 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 602-744 |
| Cow position: | chr3:77589953-77589810 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 603-724 |
| Cow position: | chr3:45642061-45641939 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 603-738 |
| Cow position: | chr3:31528391-31528262 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 603-740 |
| Cow position: | chr3:68127655-68127517 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 603-744 |
| Cow position: | chr3:26581502-26581645 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 604-742 |
| Cow position: | chr3:74723871-74724010 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 605-742 |
| Cow position: | chr3:21332254-21332385 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 605-744 |
| Cow position: | chr3:2285252-2285113 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 84, 47 |
| Conread position: | 607-744 |
| Cow position: | chr3:31286341-31286473 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 79, 57 |
| Conread position: | 608-744 |
| Cow position: | chr3:27633441-27633578 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 614-744 |
| Cow position: | chr3:78442330-78442459 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 72, 30 |
| Conread position: | 619-742 |
| Cow position: | chr3:32773748-32773624 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
Show alignments to all cow chromosomes.