Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8022O19.3 |
| Conread position: | 1-253 |
| Cow position: | chr4:15649399-15649646 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 58, 25 |
| Conread position: | 1-305 |
| Cow position: | chr4:18476887-18477184 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 60, 113 |
| Conread position: | 1-305 |
| Cow position: | chr4:50756624-50756923 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 64, 117 |
| Conread position: | 1-360 |
| Cow position: | chr4:12015687-12015338 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 194, 10 |
| Conread position: | 1-420 |
| Cow position: | chr4:64841743-64842178 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 290 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 62, 96 |
| Conread position: | 3-495 |
| Cow position: | chr4:60111812-60112312 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 434 |
| Conread position: | 5-363 |
| Cow position: | chr4:37855-38225 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 58, 199 |
| Conread position: | 10-405 |
| Cow position: | chr4:25126110-25126507 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 145, 89 |
| Conread position: | 74-538 |
| Cow position: | chr4:61453943-61454393 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 15 |
| Conread position: | 305-616 |
| Cow position: | chr4:42548484-42548168 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 51, 42 |
| Conread position: | 550-741 |
| Cow position: | chr4:58432329-58432520 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 136, 31 |
| Conread position: | 572-744 |
| Cow position: | chr4:2443281-2443450 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 35, 10 |
| Conread position: | 579-742 |
| Cow position: | chr4:5188399-5188563 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 17, 12 |
| Conread position: | 581-742 |
| Cow position: | chr4:39647262-39647111 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 27, 32 |
| Conread position: | 581-744 |
| Cow position: | chr4:31002749-31002913 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 597-742 |
| Cow position: | chr4:45401238-45401092 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 597-744 |
| Cow position: | chr4:49881403-49881544 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 598-738 |
| Cow position: | chr4:29067064-29067195 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 598-744 |
| Cow position: | chr4:34043010-34043159 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 600-744 |
| Cow position: | chr4:5784301-5784158 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 602-727 |
| Cow position: | chr4:41975137-41975262 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 602-742 |
| Cow position: | chr4:32140692-32140827 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 15 |
| Conread position: | 602-744 |
| Cow position: | chr4:36759871-36759726 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-744 |
| Cow position: | chr4:57221631-57221774 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-744 |
| Cow position: | chr4:57565637-57565775 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 84, 43 |
| Conread position: | 602-744 |
| Cow position: | chr4:57652802-57652653 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 603-744 |
| Cow position: | chr4:5886919-5886777 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 606-744 |
| Cow position: | chr4:4519730-4519591 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 607-742 |
| Cow position: | chr4:31586025-31586161 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 608-744 |
| Cow position: | chr4:49742138-49742007 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 78, 36 |
| Conread position: | 614-742 |
| Cow position: | chr4:6794058-6793930 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 72, 45 |
| Conread position: | 614-744 |
| Cow position: | chr4:52596975-52597109 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 620-744 |
| Cow position: | chr4:17178093-17177968 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 620-744 |
| Cow position: | chr4:22506817-22506937 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 626-744 |
| Cow position: | chr4:4029392-4029273 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
Show alignments to all cow chromosomes.