Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8022O19.3 |
| Conread position: | 1-253 |
| Cow position: | chr8:8106758-8107008 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 67, 84 |
| Conread position: | 1-259 |
| Cow position: | chr8:56487642-56487898 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 62, 34 |
| Conread position: | 1-300 |
| Cow position: | chr8:39809400-39809707 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-420 |
| Cow position: | chr8:57020070-57019633 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 64, 178 |
| Conread position: | 543-744 |
| Cow position: | chr8:11794838-11794641 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 546-736 |
| Cow position: | chr8:51442919-51443112 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 23, 12 |
| Conread position: | 550-742 |
| Cow position: | chr8:8479989-8480185 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 48 |
| Conread position: | 559-742 |
| Cow position: | chr8:18801879-18801699 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 47, 32 |
| Conread position: | 561-744 |
| Cow position: | chr8:21900313-21900133 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 582-744 |
| Cow position: | chr8:54159365-54159202 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 21, 140 |
| Conread position: | 597-744 |
| Cow position: | chr8:19773079-19772931 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 599-734 |
| Cow position: | chr8:31185841-31185710 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 599-740 |
| Cow position: | chr8:7103808-7103950 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 599-741 |
| Cow position: | chr8:31888236-31888093 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 599-742 |
| Cow position: | chr8:9986399-9986255 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 599-744 |
| Cow position: | chr8:6763677-6763821 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 87, 24 |
| Conread position: | 600-744 |
| Cow position: | chr8:32959999-32960144 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 601-734 |
| Cow position: | chr8:7125459-7125593 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 83, 35 |
| Conread position: | 602-738 |
| Cow position: | chr8:10167429-10167292 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 602-738 |
| Cow position: | chr8:14617293-14617430 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 70, 78 |
| Conread position: | 602-738 |
| Cow position: | chr8:40432264-40432398 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 84, 101 |
| Conread position: | 602-744 |
| Cow position: | chr8:6507670-6507813 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 99 |
| Conread position: | 603-742 |
| Cow position: | chr8:18725810-18725670 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 604-744 |
| Cow position: | chr8:32720511-32720375 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 81, 46 |
| Conread position: | 607-744 |
| Cow position: | chr8:22102590-22102728 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 607-744 |
| Cow position: | chr8:33438395-33438258 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 79, 110 |
| Conread position: | 614-744 |
| Cow position: | chr8:18883419-18883287 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 619-738 |
| Cow position: | chr8:40570462-40570582 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 642-744 |
| Cow position: | chr8:23440547-23440650 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
Show alignments to all cow chromosomes.