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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8023F22.3
        

               
Conread position:
               
404-986
               

               
Cow position:
               
chr13:16021222-16020643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
331, 355
               

               
Conread position:
               
404-990
               

               
Cow position:
               
chr13:14412256-14411671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
332, 345
               

               
Conread position:
               
513-843
               

               
Cow position:
               
chr13:26382978-26383305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
46, 112
               

               
Conread position:
               
513-980
               

               
Cow position:
               
chr13:18852326-18851878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
194, 43
               

               
Conread position:
               
530-1006
               

               
Cow position:
               
chr13:40491468-40490983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 179
               

               
Conread position:
               
532-733
               

               
Cow position:
               
chr13:11147539-11147343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 27
               

               
Conread position:
               
534-914
               

               
Cow position:
               
chr13:20679575-20679192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
174, 27
               

               
Conread position:
               
539-914
               

               
Cow position:
               
chr13:51821669-51822019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
168, 19
               

               
Conread position:
               
539-979
               

               
Cow position:
               
chr13:15257152-15257576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
204, 71
               

               
Conread position:
               
539-986
               

               
Cow position:
               
chr13:6974385-6973946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 19
               

               
Conread position:
               
541-1005
               

               
Cow position:
               
chr13:37592714-37593177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 81
               

               
Conread position:
               
542-861
               

               
Cow position:
               
chr13:11954893-11955210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
165, 16
               

               
Conread position:
               
544-925
               

               
Cow position:
               
chr13:40943470-40943085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
545-914
               

               
Cow position:
               
chr13:20705980-20706350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
12, 78
               

               
Conread position:
               
545-977
               

               
Cow position:
               
chr13:2192929-2192530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
545-993
               

               
Cow position:
               
chr13:17977551-17977119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
547-907
               

               
Cow position:
               
chr13:547709-547357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
547-982
               

               
Cow position:
               
chr13:24230430-24229998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
548-1006
               

               
Cow position:
               
chr13:152168-151736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 62
               

               
Conread position:
               
549-904
               

               
Cow position:
               
chr13:35718919-35719271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
149, 12
               

               
Conread position:
               
549-993
               

               
Cow position:
               
chr13:10988852-10989298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 67
               

               
Conread position:
               
550-839
               

               
Cow position:
               
chr13:2463014-2463301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
157, 87
               

               
Conread position:
               
550-874
               

               
Cow position:
               
chr13:19138652-19138334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
163, 59
               

               
Conread position:
               
550-890
               

               
Cow position:
               
chr13:15903241-15902903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 121
               

               
Conread position:
               
550-897
               

               
Cow position:
               
chr13:12408069-12408417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
159, 11
               

               
Conread position:
               
550-914
               

               
Cow position:
               
chr13:15281720-15282079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 50
               

               
Conread position:
               
550-949
               

               
Cow position:
               
chr13:43919046-43919445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
551-875
               

               
Cow position:
               
chr13:25531574-25531897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 70
               

               
Conread position:
               
551-896
               

               
Cow position:
               
chr13:32717661-32717992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
291, 66
               

               
Conread position:
               
551-897
               

               
Cow position:
               
chr13:43194389-43194041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
150, 67
               

               
Conread position:
               
551-914
               

               
Cow position:
               
chr13:17800286-17799930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
551-981
               

               
Cow position:
               
chr13:25927006-25926577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 71
               

               
Conread position:
               
551-986
               

               
Cow position:
               
chr13:44278568-44278130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
157, 69
               

               
Conread position:
               
551-990
               

               
Cow position:
               
chr13:17114166-17114601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
184, 30
               

               
Conread position:
               
551-1001
               

               
Cow position:
               
chr13:12574848-12574399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
255, 59
               

               
Conread position:
               
552-789
               

               
Cow position:
               
chr13:43812294-43812070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
206, 27
               

               
Conread position:
               
552-885
               

               
Cow position:
               
chr13:57493973-57494305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
153, 10
               

               
Conread position:
               
553-1006
               

               
Cow position:
               
chr13:57475205-57475650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 21
               

               
Conread position:
               
556-897
               

               
Cow position:
               
chr13:20683913-20684258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
152, 27
               

               
Conread position:
               
557-761
               

               
Cow position:
               
chr13:5079017-5079211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
151, 31
               

               
Conread position:
               
558-839
               

               
Cow position:
               
chr13:8838787-8839056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
177, 63
               

               
Conread position:
               
558-840
               

               
Cow position:
               
chr13:60487249-60487527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
129, 60
               

               
Conread position:
               
558-897
               

               
Cow position:
               
chr13:7010676-7010345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
205, 63
               

               
Conread position:
               
558-897
               

               
Cow position:
               
chr13:17347014-17346682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
129, 63
               

               
Conread position:
               
558-899
               

               
Cow position:
               
chr13:8245125-8245462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
143, 63
               

               
Conread position:
               
558-993
               

               
Cow position:
               
chr13:57002938-57002501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
149, 50
               

               
Conread position:
               
558-1006
               

               
Cow position:
               
chr13:7076463-7076007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 65
               

               
Conread position:
               
558-1007
               

               
Cow position:
               
chr13:26480007-26480439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 45
               

               
Conread position:
               
559-986
               

               
Cow position:
               
chr13:34995120-34995528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
217, 63
               

               
Conread position:
               
560-779
               

               
Cow position:
               
chr13:21904867-21904657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
112, 52
               

               
Conread position:
               
560-883
               

               
Cow position:
               
chr13:10932757-10932437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
178, 54
               

               
Conread position:
               
560-914
               

               
Cow position:
               
chr13:61990130-61990469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
147, 5
               

               
Conread position:
               
560-986
               

               
Cow position:
               
chr13:26261589-26262005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 62
               

               
Conread position:
               
560-995
               

               
Cow position:
               
chr13:21235480-21235894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
560-998
               

               
Cow position:
               
chr13:45023003-45023448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 63
               

               
Conread position:
               
560-1001
               

               
Cow position:
               
chr13:19223854-19223418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
560-1008
               

               
Cow position:
               
chr13:25434924-25435343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
561-727
               

               
Cow position:
               
chr13:15740273-15740110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
146, 55
               

               
Conread position:
               
561-742
               

               
Cow position:
               
chr13:27027564-27027744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
110, 57
               

               
Conread position:
               
561-746
               

               
Cow position:
               
chr13:15172203-15172384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
140, 49
               

               
Conread position:
               
561-746
               

               
Cow position:
               
chr13:25261604-25261783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
141, 60
               

               
Conread position:
               
561-747
               

               
Cow position:
               
chr13:6606817-6606997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
146, 51
               

               
Conread position:
               
561-750
               

               
Cow position:
               
chr13:21210066-21209883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
172, 57
               

               
Conread position:
               
561-780
               

               
Cow position:
               
chr13:2339634-2339429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
174, 60
               

               
Conread position:
               
561-795
               

               
Cow position:
               
chr13:25248939-25249180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
61, 176
               

               
Conread position:
               
561-804
               

               
Cow position:
               
chr13:54093944-54093714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
146, 49
               

               
Conread position:
               
561-809
               

               
Cow position:
               
chr13:1011536-1011295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
116, 60
               

               
Conread position:
               
561-809
               

               
Cow position:
               
chr13:61170511-61170754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
144, 47
               

               
Conread position:
               
561-820
               

               
Cow position:
               
chr13:37516932-37517188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
144, 60
               

               
Conread position:
               
561-828
               

               
Cow position:
               
chr13:33517720-33517978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
144, 53
               

               
Conread position:
               
561-843
               

               
Cow position:
               
chr13:1155504-1155773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
206, 60
               

               
Conread position:
               
561-843
               

               
Cow position:
               
chr13:17004388-17004663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
206, 37
               

               
Conread position:
               
561-843
               

               
Cow position:
               
chr13:21039394-21039669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
148, 62
               

               
Conread position:
               
561-843
               

               
Cow position:
               
chr13:24376694-24376423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
206, 49
               

               
Conread position:
               
561-843
               

               
Cow position:
               
chr13:31808716-31808451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
116, 49
               

               
Conread position:
               
561-843
               

               
Cow position:
               
chr13:34035572-34035297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
561-843
               

               
Cow position:
               
chr13:45604214-45604486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
167, 60
               

               
Conread position:
               
561-843
               

               
Cow position:
               
chr13:61047410-61047144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
116, 16
               

               
Conread position:
               
561-869
               

               
Cow position:
               
chr13:18244060-18243761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 51
               

               
Conread position:
               
561-876
               

               
Cow position:
               
chr13:8201282-8201591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
145, 60
               

               
Conread position:
               
561-885
               

               
Cow position:
               
chr13:17622488-17622173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 35
               

               
Conread position:
               
561-889
               

               
Cow position:
               
chr13:12202569-12202242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
146, 49
               

               
Conread position:
               
561-892
               

               
Cow position:
               
chr13:6153575-6153906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
561-895
               

               
Cow position:
               
chr13:52285020-52284690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 52
               

               
Conread position:
               
561-897
               

               
Cow position:
               
chr13:5713498-5713187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
146, 49
               

               
Conread position:
               
561-897
               

               
Cow position:
               
chr13:23270009-23270333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 49
               

               
Conread position:
               
561-897
               

               
Cow position:
               
chr13:46311831-46312140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
129, 48
               

               
Conread position:
               
561-897
               

               
Cow position:
               
chr13:54344980-54344653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
561-899
               

               
Cow position:
               
chr13:15884809-15885150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
100, 50
               

               
Conread position:
               
561-901
               

               
Cow position:
               
chr13:20649779-20650114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
561-901
               

               
Cow position:
               
chr13:48037824-48037491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
144, 47
               

               
Conread position:
               
561-904
               

               
Cow position:
               
chr13:37981548-37981878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
95, 60
               

               
Conread position:
               
561-904
               

               
Cow position:
               
chr13:38277933-38278282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 56
               

               
Conread position:
               
561-905
               

               
Cow position:
               
chr13:9593711-9593370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 47
               

               
Conread position:
               
561-905
               

               
Cow position:
               
chr13:13176853-13176513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
147, 34
               

               
Conread position:
               
561-905
               

               
Cow position:
               
chr13:37382014-37381665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 55
               

               
Conread position:
               
561-907
               

               
Cow position:
               
chr13:18172544-18172198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
146, 47
               

               
Conread position:
               
561-907
               

               
Cow position:
               
chr13:20563201-20562855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
146, 55
               

               
Conread position:
               
561-910
               

               
Cow position:
               
chr13:60429874-60430218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
146, 56
               

               
Conread position:
               
561-914
               

               
Cow position:
               
chr13:9265614-9265971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
50, 110
               

               
Conread position:
               
561-914
               

               
Cow position:
               
chr13:12546701-12547053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 55
               

               
Conread position:
               
561-914
               

               
Cow position:
               
chr13:23166892-23167248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
147, 60
               

               
Conread position:
               
561-916
               

               
Cow position:
               
chr13:54080600-54080961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 60
               

               
Conread position:
               
561-951
               

               
Cow position:
               
chr13:20666182-20666567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
172, 69
               

               
Conread position:
               
561-951
               

               
Cow position:
               
chr13:23479233-23478847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
142, 46
               

               
Conread position:
               
561-959
               

               
Cow position:
               
chr13:42229532-42229112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
55, 108
               

               
Conread position:
               
561-963
               

               
Cow position:
               
chr13:17855578-17855174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
146, 42
               

               
Conread position:
               
561-964
               

               
Cow position:
               
chr13:34263169-34263567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
151, 51
               

               
Conread position:
               
561-966
               

               
Cow position:
               
chr13:30026316-30025933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
115, 61
               

               
Conread position:
               
561-966
               

               
Cow position:
               
chr13:52284113-52283712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
116, 60
               

               
Conread position:
               
561-968
               

               
Cow position:
               
chr13:15446250-15445851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
110, 42
               

               
Conread position:
               
561-971
               

               
Cow position:
               
chr13:15974814-15974417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
146, 51
               

               
Conread position:
               
561-972
               

               
Cow position:
               
chr13:15869323-15868907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 35
               

               
Conread position:
               
561-972
               

               
Cow position:
               
chr13:20378133-20378520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
144, 54
               

               
Conread position:
               
561-972
               

               
Cow position:
               
chr13:20820636-20821039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
141, 62
               

               
Conread position:
               
561-975
               

               
Cow position:
               
chr13:27525057-27525464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 57
               

               
Conread position:
               
561-978
               

               
Cow position:
               
chr13:12670241-12670660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
144, 31
               

               
Conread position:
               
561-978
               

               
Cow position:
               
chr13:20839771-20839372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 75
               

               
Conread position:
               
561-978
               

               
Cow position:
               
chr13:34728633-34729049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 49
               

               
Conread position:
               
561-979
               

               
Cow position:
               
chr13:20784792-20784385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
174, 48
               

               
Conread position:
               
561-979
               

               
Cow position:
               
chr13:35659957-35659545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
144, 57
               

               
Conread position:
               
561-982
               

               
Cow position:
               
chr13:971694-972109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
147, 62
               

               
Conread position:
               
561-982
               

               
Cow position:
               
chr13:59687675-59688075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
154, 61
               

               
Conread position:
               
561-985
               

               
Cow position:
               
chr13:9974864-9975283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 51
               

               
Conread position:
               
561-985
               

               
Cow position:
               
chr13:42114225-42113800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
116, 62
               

               
Conread position:
               
561-986
               

               
Cow position:
               
chr13:3315470-3315902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 60
               

               
Conread position:
               
561-986
               

               
Cow position:
               
chr13:4553003-4552610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
146, 27
               

               
Conread position:
               
561-986
               

               
Cow position:
               
chr13:17821055-17821474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
147, 111
               

               
Conread position:
               
561-986
               

               
Cow position:
               
chr13:35526013-35526410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
219, 51
               

               
Conread position:
               
561-986
               

               
Cow position:
               
chr13:44202193-44201793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
174, 62
               

               
Conread position:
               
561-986
               

               
Cow position:
               
chr13:49805179-49804772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
561-986
               

               
Cow position:
               
chr13:56686631-56686227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
175, 48
               

               
Conread position:
               
561-987
               

               
Cow position:
               
chr13:14544326-14543918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
561-990
               

               
Cow position:
               
chr13:25695564-25695987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 60
               

               
Conread position:
               
561-990
               

               
Cow position:
               
chr13:46525238-46525649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
99, 42
               

               
Conread position:
               
561-992
               

               
Cow position:
               
chr13:16015011-16014581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
561-992
               

               
Cow position:
               
chr13:51528242-51528660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
172, 53
               

               
Conread position:
               
561-993
               

               
Cow position:
               
chr13:5263082-5263501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 47
               

               
Conread position:
               
561-993
               

               
Cow position:
               
chr13:8362542-8362969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 61
               

               
Conread position:
               
561-993
               

               
Cow position:
               
chr13:13089228-13088812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 60
               

               
Conread position:
               
561-993
               

               
Cow position:
               
chr13:14063320-14063744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
177, 61
               

               
Conread position:
               
561-993
               

               
Cow position:
               
chr13:55674001-55674431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 46
               

               
Conread position:
               
561-996
               

               
Cow position:
               
chr13:52199293-52198877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
147, 52
               

               
Conread position:
               
561-998
               

               
Cow position:
               
chr13:9906947-9906501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 110
               

               
Conread position:
               
561-998
               

               
Cow position:
               
chr13:44323106-44322663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
199, 48
               

               
Conread position:
               
561-999
               

               
Cow position:
               
chr13:17970830-17971277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
150, 51
               

               
Conread position:
               
561-999
               

               
Cow position:
               
chr13:37069553-37069112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 62
               

               
Conread position:
               
561-1000
               

               
Cow position:
               
chr13:37804083-37803648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
272, 31
               

               
Conread position:
               
561-1002
               

               
Cow position:
               
chr13:6616544-6616995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 69
               

               
Conread position:
               
561-1002
               

               
Cow position:
               
chr13:33256700-33256265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
131, 61
               

               
Conread position:
               
561-1003
               

               
Cow position:
               
chr13:9587379-9587814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
561-1003
               

               
Cow position:
               
chr13:38872768-38873188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
174, 56
               

               
Conread position:
               
561-1004
               

               
Cow position:
               
chr13:6079215-6079637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 51
               

               
Conread position:
               
561-1004
               

               
Cow position:
               
chr13:21276059-21275621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 62
               

               
Conread position:
               
561-1004
               

               
Cow position:
               
chr13:24754088-24753660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 55
               

               
Conread position:
               
561-1004
               

               
Cow position:
               
chr13:45353250-45352795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 49
               

               
Conread position:
               
561-1004
               

               
Cow position:
               
chr13:60508912-60509360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
561-1005
               

               
Cow position:
               
chr13:46112171-46111730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 60
               

               
Conread position:
               
561-1006
               

               
Cow position:
               
chr13:9142488-9142034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
147, 48
               

               
Conread position:
               
561-1006
               

               
Cow position:
               
chr13:14927443-14927023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
561-1006
               

               
Cow position:
               
chr13:21287886-21288322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 61
               

               
Conread position:
               
561-1006
               

               
Cow position:
               
chr13:32017318-32017751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
561-1006
               

               
Cow position:
               
chr13:43480265-43479828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 57
               

               
Conread position:
               
561-1006
               

               
Cow position:
               
chr13:51014976-51015418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
113, 60
               

               
Conread position:
               
561-1008
               

               
Cow position:
               
chr13:12045129-12045582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
561-1008
               

               
Cow position:
               
chr13:17021516-17021963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 62
               

               
Conread position:
               
562-789
               

               
Cow position:
               
chr13:6975587-6975811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
146, 59
               

               
Conread position:
               
562-843
               

               
Cow position:
               
chr13:32949800-32950062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
115, 59
               

               
Conread position:
               
562-843
               

               
Cow position:
               
chr13:34508079-34507816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
115, 54
               

               
Conread position:
               
562-986
               

               
Cow position:
               
chr13:17291927-17292344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
145, 54
               

               
Conread position:
               
562-1000
               

               
Cow position:
               
chr13:12990050-12989633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
564-883
               

               
Cow position:
               
chr13:15528827-15529151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
143, 54
               

               
Conread position:
               
565-821
               

               
Cow position:
               
chr13:19178476-19178224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
141, 47
               

               
Conread position:
               
565-885
               

               
Cow position:
               
chr13:15167023-15166702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
143, 51
               

               
Conread position:
               
565-900
               

               
Cow position:
               
chr13:5082853-5082520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
141, 17
               

               
Conread position:
               
565-904
               

               
Cow position:
               
chr13:10928790-10929123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
145, 54
               

               
Conread position:
               
565-910
               

               
Cow position:
               
chr13:56148741-56148380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 57
               

               
Conread position:
               
565-910
               

               
Cow position:
               
chr13:56160226-56160587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 57
               

               
Conread position:
               
565-938
               

               
Cow position:
               
chr13:13261208-13260830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
149, 53
               

               
Conread position:
               
565-960
               

               
Cow position:
               
chr13:1231851-1231452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
142, 56
               

               
Conread position:
               
565-979
               

               
Cow position:
               
chr13:311630-311223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
142, 40
               

               
Conread position:
               
565-1003
               

               
Cow position:
               
chr13:10845793-10845385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 61
               

               
Conread position:
               
565-1008
               

               
Cow position:
               
chr13:20605919-20606361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
173, 56
               

               
Conread position:
               
565-1008
               

               
Cow position:
               
chr13:60974278-60973819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 44
               

               
Conread position:
               
566-799
               

               
Cow position:
               
chr13:562939-563169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
41, 57
               

               
Conread position:
               
570-968
               

               
Cow position:
               
chr13:24369779-24369387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 48
               

               
Conread position:
               
570-979
               

               
Cow position:
               
chr13:15958816-15958413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
135, 47
               

               
Conread position:
               
570-986
               

               
Cow position:
               
chr13:17158676-17159098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 48
               

               
Conread position:
               
571-752
               

               
Cow position:
               
chr13:3003641-3003462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
134, 51
               

               
Conread position:
               
571-764
               

               
Cow position:
               
chr13:60690528-60690718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
134, 39
               

               
Conread position:
               
571-789
               

               
Cow position:
               
chr13:9884962-9884751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
164, 39
               

               
Conread position:
               
571-800
               

               
Cow position:
               
chr13:20041767-20041997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
43, 51
               

               
Conread position:
               
571-800
               

               
Cow position:
               
chr13:34052407-34052616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
571-806
               

               
Cow position:
               
chr13:5091467-5091702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
137, 47
               

               
Conread position:
               
571-814
               

               
Cow position:
               
chr13:5752229-5752470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
130, 43
               

               
Conread position:
               
571-821
               

               
Cow position:
               
chr13:5658536-5658774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
178, 47
               

               
Conread position:
               
571-823
               

               
Cow position:
               
chr13:1780027-1779779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
98, 51
               

               
Conread position:
               
571-843
               

               
Cow position:
               
chr13:4464201-4463942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
196, 47
               

               
Conread position:
               
571-843
               

               
Cow position:
               
chr13:17613540-17613270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
106, 50
               

               
Conread position:
               
571-854
               

               
Cow position:
               
chr13:61166264-61166536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
571-873
               

               
Cow position:
               
chr13:52879606-52879297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
164, 41
               

               
Conread position:
               
571-893
               

               
Cow position:
               
chr13:8652243-8652567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
571-894
               

               
Cow position:
               
chr13:62247325-62247012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
181, 48
               

               
Conread position:
               
571-895
               

               
Cow position:
               
chr13:11061181-11060861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 55
               

               
Conread position:
               
571-905
               

               
Cow position:
               
chr13:9643688-9644028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 52
               

               
Conread position:
               
571-907
               

               
Cow position:
               
chr13:26369720-26369386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
137, 39
               

               
Conread position:
               
571-907
               

               
Cow position:
               
chr13:46181983-46181651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
134, 39
               

               
Conread position:
               
571-907
               

               
Cow position:
               
chr13:52585826-52586176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
137, 51
               

               
Conread position:
               
571-909
               

               
Cow position:
               
chr13:53566793-53566461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
134, 47
               

               
Conread position:
               
571-910
               

               
Cow position:
               
chr13:6086706-6087033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
134, 41
               

               
Conread position:
               
571-910
               

               
Cow position:
               
chr13:23856409-23856070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 10
               

               
Conread position:
               
571-910
               

               
Cow position:
               
chr13:51901806-51901443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
68, 49
               

               
Conread position:
               
571-914
               

               
Cow position:
               
chr13:17439572-17439913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
134, 38
               

               
Conread position:
               
571-915
               

               
Cow position:
               
chr13:1042762-1043108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
571-919
               

               
Cow position:
               
chr13:37484076-37484429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
136, 47
               

               
Conread position:
               
571-924
               

               
Cow position:
               
chr13:18835380-18835050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
137, 51
               

               
Conread position:
               
571-928
               

               
Cow position:
               
chr13:11096366-11096023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 47
               

               
Conread position:
               
571-964
               

               
Cow position:
               
chr13:38012555-38012145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
571-967
               

               
Cow position:
               
chr13:26847630-26848028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
99, 46
               

               
Conread position:
               
571-968
               

               
Cow position:
               
chr13:24155735-24155312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
136, 49
               

               
Conread position:
               
571-972
               

               
Cow position:
               
chr13:12207237-12206859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
137, 47
               

               
Conread position:
               
571-972
               

               
Cow position:
               
chr13:23667453-23667055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
137, 39
               

               
Conread position:
               
571-978
               

               
Cow position:
               
chr13:18166924-18166524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 52
               

               
Conread position:
               
571-978
               

               
Cow position:
               
chr13:24715436-24715041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 51
               

               
Conread position:
               
571-978
               

               
Cow position:
               
chr13:61976769-61977166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
134, 47
               

               
Conread position:
               
571-979
               

               
Cow position:
               
chr13:19882841-19883243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 44
               

               
Conread position:
               
571-979
               

               
Cow position:
               
chr13:21241898-21242285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
196, 45
               

               
Conread position:
               
571-980
               

               
Cow position:
               
chr13:34261426-34261025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 52
               

               
Conread position:
               
571-983
               

               
Cow position:
               
chr13:44626574-44626152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
106, 51
               

               
Conread position:
               
571-985
               

               
Cow position:
               
chr13:20271021-20271446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
109, 51
               

               
Conread position:
               
571-986
               

               
Cow position:
               
chr13:19022472-19022048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 42
               

               
Conread position:
               
571-986
               

               
Cow position:
               
chr13:19393481-19393080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 43
               

               
Conread position:
               
571-986
               

               
Cow position:
               
chr13:34281874-34281465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
134, 52
               

               
Conread position:
               
571-986
               

               
Cow position:
               
chr13:48251798-48252184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
137, 46
               

               
Conread position:
               
571-987
               

               
Cow position:
               
chr13:42200813-42200403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 41
               

               
Conread position:
               
571-990
               

               
Cow position:
               
chr13:15041278-15041696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 52
               

               
Conread position:
               
571-993
               

               
Cow position:
               
chr13:4664668-4665073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 52
               

               
Conread position:
               
571-993
               

               
Cow position:
               
chr13:18989899-18989500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
137, 30
               

               
Conread position:
               
571-1001
               

               
Cow position:
               
chr13:22115898-22115446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
136, 49
               

               
Conread position:
               
571-1002
               

               
Cow position:
               
chr13:13501425-13501843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 47
               

               
Conread position:
               
571-1003
               

               
Cow position:
               
chr13:5278995-5279437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 41
               

               
Conread position:
               
571-1004
               

               
Cow position:
               
chr13:20879640-20880057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 40
               

               
Conread position:
               
571-1004
               

               
Cow position:
               
chr13:37985556-37985978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 51
               

               
Conread position:
               
571-1004
               

               
Cow position:
               
chr13:54702385-54701947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 52
               

               
Conread position:
               
571-1005
               

               
Cow position:
               
chr13:15192700-15193123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 49
               

               
Conread position:
               
571-1006
               

               
Cow position:
               
chr13:7059669-7059223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
105, 50
               

               
Conread position:
               
571-1006
               

               
Cow position:
               
chr13:32283321-32282889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 26
               

               
Conread position:
               
571-1008
               

               
Cow position:
               
chr13:51940925-51940509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 48
               

               
Conread position:
               
572-843
               

               
Cow position:
               
chr13:41253811-41253551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
5, 43
               

               
Conread position:
               
572-888
               

               
Cow position:
               
chr13:21155296-21155605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
135, 49
               

               
Conread position:
               
572-902
               

               
Cow position:
               
chr13:40722516-40722840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
90, 50
               

               
Conread position:
               
572-1006
               

               
Cow position:
               
chr13:10924711-10925160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 98
               

               
Conread position:
               
573-870
               

               
Cow position:
               
chr13:29631050-29630755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
165, 62
               

               
Conread position:
               
573-912
               

               
Cow position:
               
chr13:43184681-43185023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 41
               

               
Conread position:
               
573-986
               

               
Cow position:
               
chr13:25817705-25817313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
162, 44
               

               
Conread position:
               
573-998
               

               
Cow position:
               
chr13:12448796-12449207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 48
               

               
Conread position:
               
573-999
               

               
Cow position:
               
chr13:12283030-12282609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
134, 48
               

               
Conread position:
               
573-1007
               

               
Cow position:
               
chr13:17745431-17745021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 39
               

               
Conread position:
               
574-907
               

               
Cow position:
               
chr13:21283515-21283842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 49
               

               
Conread position:
               
574-934
               

               
Cow position:
               
chr13:28683550-28683196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
131, 44
               

               
Conread position:
               
574-978
               

               
Cow position:
               
chr13:15991031-15991439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 48
               

               
Conread position:
               
577-739
               

               
Cow position:
               
chr13:22025521-22025675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
130, 44
               

               
Conread position:
               
577-849
               

               
Cow position:
               
chr13:13306290-13306015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 47
               

               
Conread position:
               
577-900
               

               
Cow position:
               
chr13:11460813-11460502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
262, 46
               

               
Conread position:
               
577-999
               

               
Cow position:
               
chr13:15288737-15289149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 35
               

               
Conread position:
               
577-1002
               

               
Cow position:
               
chr13:25537835-25537409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
45, 323
               

               
Conread position:
               
578-914
               

               
Cow position:
               
chr13:2404930-2404617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
133, 58
               

               
Conread position:
               
578-1000
               

               
Cow position:
               
chr13:55583386-55582967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
102, 45
               

               
Conread position:
               
579-897
               

               
Cow position:
               
chr13:14771647-14771324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
129, 44
               

               
Conread position:
               
580-789
               

               
Cow position:
               
chr13:43839362-43839559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
177, 41
               

               
Conread position:
               
580-843
               

               
Cow position:
               
chr13:12618924-12619185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
580-981
               

               
Cow position:
               
chr13:47186409-47186019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 41
               

               
Conread position:
               
580-1006
               

               
Cow position:
               
chr13:38329815-38329381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
127, 38
               

               
Conread position:
               
581-811
               

               
Cow position:
               
chr13:50546036-50545814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
124, 42
               

               
Conread position:
               
581-986
               

               
Cow position:
               
chr13:41806964-41806560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 42
               

               
Conread position:
               
581-1001
               

               
Cow position:
               
chr13:33054207-33054603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
264, 42
               

               
Conread position:
               
582-766
               

               
Cow position:
               
chr13:21189464-21189283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
126, 36
               

               
Conread position:
               
582-821
               

               
Cow position:
               
chr13:62474616-62474847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
153, 39
               

               
Conread position:
               
582-921
               

               
Cow position:
               
chr13:11644116-11643788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
582-995
               

               
Cow position:
               
chr13:49503345-49503764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
126, 41
               

               
Conread position:
               
583-986
               

               
Cow position:
               
chr13:46516254-46515843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
56, 102
               

               
Conread position:
               
583-986
               

               
Cow position:
               
chr13:52055414-52055809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 35
               

               
Conread position:
               
583-1000
               

               
Cow position:
               
chr13:19188486-19188082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 40
               

               
Conread position:
               
584-1008
               

               
Cow position:
               
chr13:5758164-5758570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
585-906
               

               
Cow position:
               
chr13:966257-965960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
150, 38
               

               
Conread position:
               
587-907
               

               
Cow position:
               
chr13:20231022-20231328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
148, 35
               

               
Conread position:
               
587-982
               

               
Cow position:
               
chr13:24586224-24585836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 27
               

               
Conread position:
               
587-987
               

               
Cow position:
               
chr13:23960631-23961024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
121, 36
               

               
Conread position:
               
587-993
               

               
Cow position:
               
chr13:49824205-49823802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
121, 35
               

               
Conread position:
               
587-1000
               

               
Cow position:
               
chr13:49022692-49023097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 43
               

               
Conread position:
               
588-884
               

               
Cow position:
               
chr13:15110501-15110199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 34
               

               
Conread position:
               
591-1000
               

               
Cow position:
               
chr13:14016391-14016784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
117, 32
               

               
Conread position:
               
593-975
               

               
Cow position:
               
chr13:20473515-20473880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
126, 30
               

               
Conread position:
               
595-971
               

               
Cow position:
               
chr13:607091-607464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
603-967
               

               
Cow position:
               
chr13:20157900-20157532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
105, 12
               

               
Conread position:
               
604-1000
               

               
Cow position:
               
chr13:54583047-54582643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
605-979
               

               
Cow position:
               
chr13:60966936-60966570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
609-1006
               

               
Cow position:
               
chr13:17568933-17569333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
610-892
               

               
Cow position:
               
chr13:32657632-32657923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
91, 69
               

               
Conread position:
               
612-910
               

               
Cow position:
               
chr13:8609389-8609688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
122, 56
               

               
Conread position:
               
612-914
               

               
Cow position:
               
chr13:55316027-55316342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
96, 60
               

               
Conread position:
               
612-931
               

               
Cow position:
               
chr13:8524460-8524784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
613-979
               

               
Cow position:
               
chr13:2774287-2773906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
95, 9
               

               
Conread position:
               
613-993
               

               
Cow position:
               
chr13:25496166-25495786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
95, 9
               

               
Conread position:
               
613-1004
               

               
Cow position:
               
chr13:25604466-25604836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
60, 10
               

               
Conread position:
               
616-904
               

               
Cow position:
               
chr13:43762327-43762034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
89, 54
               

               
Conread position:
               
621-780
               

               
Cow position:
               
chr13:6969439-6969598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
86, 151
               

               
Conread position:
               
622-840
               

               
Cow position:
               
chr13:41154880-41155101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
85, 48
               

               
Conread position:
               
622-972
               

               
Cow position:
               
chr13:20893487-20893846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
114, 39
               

               
Conread position:
               
622-986
               

               
Cow position:
               
chr13:13320934-13320581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
113, 26
               

               
Conread position:
               
622-986
               

               
Cow position:
               
chr13:15195052-15195417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
48, 145
               

               
Conread position:
               
622-1001
               

               
Cow position:
               
chr13:26743275-26742894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
622-1005
               

               
Cow position:
               
chr13:19581935-19582313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
85, 57
               

               
Conread position:
               
623-975
               

               
Cow position:
               
chr13:38548731-38548380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
85, 112
               

               
Conread position:
               
623-1000
               

               
Cow position:
               
chr13:26698346-26698725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
67, 47
               

               
Conread position:
               
623-1007
               

               
Cow position:
               
chr13:18696993-18696587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
85, 49
               

               
Conread position:
               
624-982
               

               
Cow position:
               
chr13:48598060-48597697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
84, 56
               

               
Conread position:
               
624-993
               

               
Cow position:
               
chr13:6540162-6540524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 42
               

               
Conread position:
               
624-993
               

               
Cow position:
               
chr13:20261175-20261557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
84, 55
               

               
Conread position:
               
625-842
               

               
Cow position:
               
chr13:10098841-10099056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
626-993
               

               
Cow position:
               
chr13:21107286-21106921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
123, 44
               

               
Conread position:
               
626-1003
               

               
Cow position:
               
chr13:23512515-23512150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
79, 54
               

               
Conread position:
               
627-897
               

               
Cow position:
               
chr13:49520675-49520950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
80, 43
               

               
Conread position:
               
627-994
               

               
Cow position:
               
chr13:19033699-19033333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 22
               

               
Conread position:
               
627-1005
               

               
Cow position:
               
chr13:46044301-46043935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
628-821
               

               
Cow position:
               
chr13:14870675-14870484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
79, 103
               

               
Conread position:
               
628-896
               

               
Cow position:
               
chr13:37946807-37947078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
628-998
               

               
Cow position:
               
chr13:28552742-28552359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 153
               

               
Conread position:
               
628-1000
               

               
Cow position:
               
chr13:20360416-20360050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
107, 50
               

               
Conread position:
               
629-971
               

               
Cow position:
               
chr13:37818604-37818945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
76, 51
               

               
Conread position:
               
629-985
               

               
Cow position:
               
chr13:9900294-9899931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
630-843
               

               
Cow position:
               
chr13:18973296-18973516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
631-780
               

               
Cow position:
               
chr13:24776422-24776276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
103, 41
               

               
Conread position:
               
631-797
               

               
Cow position:
               
chr13:22030231-22030072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
631-832
               

               
Cow position:
               
chr13:13265950-13265749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
76, 47
               

               
Conread position:
               
631-839
               

               
Cow position:
               
chr13:20128808-20128600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
69, 41
               

               
Conread position:
               
631-843
               

               
Cow position:
               
chr13:52929852-52929641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
101, 140
               

               
Conread position:
               
631-886
               

               
Cow position:
               
chr13:43868973-43869231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
631-894
               

               
Cow position:
               
chr13:7663281-7663546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
631-895
               

               
Cow position:
               
chr13:17966066-17966335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
631-896
               

               
Cow position:
               
chr13:8555606-8555338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
55, 145
               

               
Conread position:
               
631-897
               

               
Cow position:
               
chr13:20180560-20180288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
69, 39
               

               
Conread position:
               
631-897
               

               
Cow position:
               
chr13:31814014-31813747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
138, 41
               

               
Conread position:
               
631-907
               

               
Cow position:
               
chr13:2414173-2413891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 143
               

               
Conread position:
               
631-907
               

               
Cow position:
               
chr13:39368098-39367821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
104, 76
               

               
Conread position:
               
631-912
               

               
Cow position:
               
chr13:46736356-46736072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
631-913
               

               
Cow position:
               
chr13:11381579-11381870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
631-914
               

               
Cow position:
               
chr13:4420490-4420185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
631-914
               

               
Cow position:
               
chr13:36771277-36771564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
631-914
               

               
Cow position:
               
chr13:37640729-37640445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
46, 63
               

               
Conread position:
               
631-972
               

               
Cow position:
               
chr13:20174893-20174535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 132
               

               
Conread position:
               
631-979
               

               
Cow position:
               
chr13:8374629-8374970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
631-1000
               

               
Cow position:
               
chr13:9800646-9800288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
631-1000
               

               
Cow position:
               
chr13:11808701-11808355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
194, 39
               

               
Conread position:
               
631-1003
               

               
Cow position:
               
chr13:52749338-52749694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
631-1004
               

               
Cow position:
               
chr13:45073785-45074138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
128, 24
               

               
Conread position:
               
631-1006
               

               
Cow position:
               
chr13:18999685-18999294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 258
               

               
Conread position:
               
631-1006
               

               
Cow position:
               
chr13:45594046-45593688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
50, 17
               

               
Conread position:
               
631-1007
               

               
Cow position:
               
chr13:5671449-5671818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
77, 37
               

               
Conread position:
               
632-998
               

               
Cow position:
               
chr13:18058107-18058477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
632-1000
               

               
Cow position:
               
chr13:3160533-3160176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 38
               

               
Conread position:
               
633-827
               

               
Cow position:
               
chr13:16833931-16834131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
39, 125
               

               
Conread position:
               
633-975
               

               
Cow position:
               
chr13:29831292-29831632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 126
               

               
Conread position:
               
633-1006
               

               
Cow position:
               
chr13:12875831-12876210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 37
               

               
Conread position:
               
633-1006
               

               
Cow position:
               
chr13:15162517-15162870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
102, 37
               

               
Conread position:
               
635-918
               

               
Cow position:
               
chr13:51115889-51116176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
123, 37
               

               
Conread position:
               
637-986
               

               
Cow position:
               
chr13:20288466-20288122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
71, 13
               

               
Conread position:
               
638-1006
               

               
Cow position:
               
chr13:49796153-49795801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
640-1008
               

               
Cow position:
               
chr13:25579053-25579432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
69, 245
               

               
Conread position:
               
641-975
               

               
Cow position:
               
chr13:58763499-58763814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
204, 29
               

               
Conread position:
               
644-914
               

               
Cow position:
               
chr13:6389510-6389251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
644-982
               

               
Cow position:
               
chr13:11260399-11260065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 39
               

               
Conread position:
               
644-1007
               

               
Cow position:
               
chr13:25381092-25380707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
64, 114
               

               
Conread position:
               
647-988
               

               
Cow position:
               
chr13:16038162-16038500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
13, 106
               

               
Conread position:
               
647-1000
               

               
Cow position:
               
chr13:21280360-21280730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
649-907
               

               
Cow position:
               
chr13:11591871-11591612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
140, 30
               

               
Conread position:
               
649-980
               

               
Cow position:
               
chr13:11202157-11201828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
649-985
               

               
Cow position:
               
chr13:45726021-45725657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
649-986
               

               
Cow position:
               
chr13:20217263-20217615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
34, 256
               

               
Conread position:
               
651-843
               

               
Cow position:
               
chr13:50713325-50713140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
84, 99
               

               
Conread position:
               
655-1003
               

               
Cow position:
               
chr13:15194613-15194951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
656-896
               

               
Cow position:
               
chr13:49457791-49457557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 7
               

               
Conread position:
               
658-998
               

               
Cow position:
               
chr13:19240554-19240214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
14, 211
               

               
Conread position:
               
659-982
               

               
Cow position:
               
chr13:18995243-18994909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
659-985
               

               
Cow position:
               
chr13:14576321-14576000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
660-889
               

               
Cow position:
               
chr13:56678129-56677895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
661-892
               

               
Cow position:
               
chr13:47322291-47322533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 22
               

               
Conread position:
               
662-1008
               

               
Cow position:
               
chr13:19279203-19278859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
73, 10
               

               
Conread position:
               
663-971
               

               
Cow position:
               
chr13:49476199-49475870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 231
               

               
Conread position:
               
665-967
               

               
Cow position:
               
chr13:16714150-16714463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 120
               

               
Conread position:
               
666-928
               

               
Cow position:
               
chr13:13297784-13297519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
39, 183
               

               
Conread position:
               
667-902
               

               
Cow position:
               
chr13:43829348-43829110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
669-971
               

               
Cow position:
               
chr13:8667720-8667414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
39, 59
               

               
Conread position:
               
670-1008
               

               
Cow position:
               
chr13:13533564-13533899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 126
               

               
Conread position:
               
672-986
               

               
Cow position:
               
chr13:15621917-15621593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
36, 8
               

               
Conread position:
               
672-998
               

               
Cow position:
               
chr13:620157-620475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
63, 37
               

               
Conread position:
               
672-1003
               

               
Cow position:
               
chr13:10221049-10220725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
56, 38
               

               
Conread position:
               
673-895
               

               
Cow position:
               
chr13:55728002-55727776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
676-972
               

               
Cow position:
               
chr13:21127244-21127543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
83, 60
               

               
Conread position:
               
679-985
               

               
Cow position:
               
chr13:19610467-19610779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 221
               

               
Conread position:
               
681-949
               

               
Cow position:
               
chr13:43893230-43893513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
682-1000
               

               
Cow position:
               
chr13:45073163-45073476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 47
               

               
Conread position:
               
683-873
               

               
Cow position:
               
chr13:60389399-60389593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
683-1008
               

               
Cow position:
               
chr13:52477553-52477884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
25, 58
               

               
Conread position:
               
684-1005
               

               
Cow position:
               
chr13:20137916-20137580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
24, 246
               

               
Conread position:
               
685-907
               

               
Cow position:
               
chr13:3211642-3211411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
22, 204
               

               
Conread position:
               
685-907
               

               
Cow position:
               
chr13:3989294-3989066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 187
               

               
Conread position:
               
685-968
               

               
Cow position:
               
chr13:19778758-19779053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 84
               

               
Conread position:
               
685-993
               

               
Cow position:
               
chr13:46329513-46329826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
17, 204
               

               
Conread position:
               
686-901
               

               
Cow position:
               
chr13:17110309-17110095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 148
               

               
Conread position:
               
686-1001
               

               
Cow position:
               
chr13:27181120-27180807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 71
               

               
Conread position:
               
690-993
               

               
Cow position:
               
chr13:11434499-11434798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
694-907
               

               
Cow position:
               
chr13:17563816-17563602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
41, 64
               

               
Conread position:
               
699-1008
               

               
Cow position:
               
chr13:17822876-17823187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
36, 67
               

               
Conread position:
               
699-1008
               

               
Cow position:
               
chr13:21170607-21170290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
9, 54
               

               
Conread position:
               
706-985
               

               
Cow position:
               
chr13:42672354-42672645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
29, 177
               

               
Conread position:
               
706-1000
               

               
Cow position:
               
chr13:6861250-6860945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
30, 177
               

               
Conread position:
               
713-899
               

               
Cow position:
               
chr13:25428167-25428353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
713-907
               

               
Cow position:
               
chr13:24110547-24110342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
22, 178
               

               
Conread position:
               
713-1002
               

               
Cow position:
               
chr13:18197546-18197835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
22, 83
               

               
Conread position:
               
714-986
               

               
Cow position:
               
chr13:12673237-12673504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
46, 21
               

               
Conread position:
               
715-907
               

               
Cow position:
               
chr13:17838008-17837813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
715-987
               

               
Cow position:
               
chr13:62008171-62007890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
23, 175
               

               
Conread position:
               
715-1008
               

               
Cow position:
               
chr13:20115312-20115010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
716-989
               

               
Cow position:
               
chr13:20534953-20534681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
718-907
               

               
Cow position:
               
chr13:9117516-9117703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
125, 11
               

               
Conread position:
               
718-1005
               

               
Cow position:
               
chr13:25970050-25969772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 53
               

               
Conread position:
               
720-979
               

               
Cow position:
               
chr13:17350407-17350134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
16, 109
               

               
Conread position:
               
721-1001
               

               
Cow position:
               
chr13:18340586-18340299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
45, 5
               

               
Conread position:
               
722-1001
               

               
Cow position:
               
chr13:11103139-11103437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 170
               

               
Conread position:
               
724-892
               

               
Cow position:
               
chr13:51856835-51857008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
5, 37
               

               
Conread position:
               
724-968
               

               
Cow position:
               
chr13:25561653-25561432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
724-978
               

               
Cow position:
               
chr13:35557057-35557319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 10
               

               
Conread position:
               
724-986
               

               
Cow position:
               
chr13:40154686-40154955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
121, 12
               

               
Conread position:
               
724-995
               

               
Cow position:
               
chr13:1147101-1147376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
11, 63
               

               
Conread position:
               
725-929
               

               
Cow position:
               
chr13:37503532-37503745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
10, 99
               

               
Conread position:
               
731-986
               

               
Cow position:
               
chr13:7046914-7046664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
731-986
               

               
Cow position:
               
chr13:38035879-38035623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
8, 175
               

               
Conread position:
               
731-1002
               

               
Cow position:
               
chr13:34873633-34873355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 153
               

               
Conread position:
               
732-944
               

               
Cow position:
               
chr13:8233036-8232835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
107, 25
               

               
Conread position:
               
739-993
               

               
Cow position:
               
chr13:21171538-21171793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 16
               

               
Conread position:
               
744-1005
               

               
Cow position:
               
chr13:84606-84357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
36, 10
               

               
Conread position:
               
747-1002
               

               
Cow position:
               
chr13:40541078-40541342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
33, 135
               

               
Conread position:
               
747-1006
               

               
Cow position:
               
chr13:21980952-21981203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 23
               

               
Conread position:
               
751-993
               

               
Cow position:
               
chr13:25941243-25941487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
755-1001
               

               
Cow position:
               
chr13:42640400-42640153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
756-986
               

               
Cow position:
               
chr13:13775225-13775469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
11, 126
               

               
Conread position:
               
756-1006
               

               
Cow position:
               
chr13:17611535-17611785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
89, 128
               

               
Conread position:
               
757-1005
               

               
Cow position:
               
chr13:15997050-15996803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
84, 120
               

               
Conread position:
               
758-925
               

               
Cow position:
               
chr13:51813923-51814087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
758-986
               

               
Cow position:
               
chr13:6183405-6183647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
85, 126
               

               
Conread position:
               
758-998
               

               
Cow position:
               
chr13:2776302-2776057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
759-912
               

               
Cow position:
               
chr13:18517059-18516905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 122
               

               
Conread position:
               
759-980
               

               
Cow position:
               
chr13:56958982-56958766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
144, 58
               

               
Conread position:
               
759-1001
               

               
Cow position:
               
chr13:9707737-9707976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
80, 11
               

               
Conread position:
               
759-1005
               

               
Cow position:
               
chr13:6189586-6189834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
759-1005
               

               
Cow position:
               
chr13:50457874-50457619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 232
               

               
Conread position:
               
759-1006
               

               
Cow position:
               
chr13:15993400-15993150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
86, 123
               

               
Conread position:
               
760-972
               

               
Cow position:
               
chr13:57985925-57986134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
84, 125
               

               
Conread position:
               
760-1008
               

               
Cow position:
               
chr13:15083672-15083426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
85, 59
               

               
Conread position:
               
761-980
               

               
Cow position:
               
chr13:33974745-33974536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 99
               

               
Conread position:
               
761-982
               

               
Cow position:
               
chr13:6926529-6926300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
84, 123
               

               
Conread position:
               
761-1002
               

               
Cow position:
               
chr13:55765166-55765408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
82, 124
               

               
Conread position:
               
763-1006
               

               
Cow position:
               
chr13:49356039-49356281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 160
               

               
Conread position:
               
764-965
               

               
Cow position:
               
chr13:7104663-7104460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
81, 120
               

               
Conread position:
               
764-993
               

               
Cow position:
               
chr13:6486242-6486476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 117
               

               
Conread position:
               
764-1006
               

               
Cow position:
               
chr13:47675926-47676178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
77, 119
               

               
Conread position:
               
765-1006
               

               
Cow position:
               
chr13:15143835-15144066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
80, 53
               

               
Conread position:
               
766-1004
               

               
Cow position:
               
chr13:28536315-28536554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
69, 44
               

               
Conread position:
               
768-968
               

               
Cow position:
               
chr13:20795205-20795406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
148, 25
               

               
Conread position:
               
769-944
               

               
Cow position:
               
chr13:56275382-56275544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
772-914
               

               
Cow position:
               
chr13:19750716-19750570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
68, 112
               

               
Conread position:
               
772-944
               

               
Cow position:
               
chr13:54652328-54652492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
772-992
               

               
Cow position:
               
chr13:47243554-47243774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
73, 40
               

               
Conread position:
               
772-993
               

               
Cow position:
               
chr13:8699736-8699965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
73, 113
               

               
Conread position:
               
772-997
               

               
Cow position:
               
chr13:16908218-16907986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
73, 113
               

               
Conread position:
               
772-999
               

               
Cow position:
               
chr13:55494525-55494748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 112
               

               
Conread position:
               
772-1001
               

               
Cow position:
               
chr13:30315508-30315272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 110
               

               
Conread position:
               
772-1001
               

               
Cow position:
               
chr13:52536566-52536339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
59, 115
               

               
Conread position:
               
772-1008
               

               
Cow position:
               
chr13:8779243-8779021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
772-1008
               

               
Cow position:
               
chr13:50768597-50768356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 44
               

               
Conread position:
               
774-993
               

               
Cow position:
               
chr13:30396705-30396493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
142, 10
               

               
Conread position:
               
774-1000
               

               
Cow position:
               
chr13:50622815-50623041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
73, 10
               

               
Conread position:
               
774-1008
               

               
Cow position:
               
chr13:17813470-17813235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
71, 110
               

               
Conread position:
               
775-986
               

               
Cow position:
               
chr13:18092877-18093085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
57, 108
               

               
Conread position:
               
775-997
               

               
Cow position:
               
chr13:10522932-10522715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 50
               

               
Conread position:
               
775-1006
               

               
Cow position:
               
chr13:45439520-45439298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
126, 66
               

               
Conread position:
               
777-971
               

               
Cow position:
               
chr13:6980916-6980724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
9, 49
               

               
Conread position:
               
779-914
               

               
Cow position:
               
chr13:21295069-21294930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 105
               

               
Conread position:
               
782-986
               

               
Cow position:
               
chr13:43839685-43839903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 102
               

               
Conread position:
               
782-1006
               

               
Cow position:
               
chr13:53850815-53850583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
63, 103
               

               
Conread position:
               
784-967
               

               
Cow position:
               
chr13:16834539-16834733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
784-986
               

               
Cow position:
               
chr13:49283791-49283994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 100
               

               
Conread position:
               
785-1000
               

               
Cow position:
               
chr13:54236791-54236582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
118, 27
               

               
Conread position:
               
787-1001
               

               
Cow position:
               
chr13:33854698-33854912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
58, 98
               

               
Conread position:
               
788-972
               

               
Cow position:
               
chr13:27027915-27028107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
788-1008
               

               
Cow position:
               
chr13:50646646-50646871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
789-978
               

               
Cow position:
               
chr13:56431848-56432029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
8, 44
               

               
Conread position:
               
791-986
               

               
Cow position:
               
chr13:54627470-54627265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
54, 69
               

               
Conread position:
               
792-985
               

               
Cow position:
               
chr13:11942198-11942390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
53, 92
               

               
Conread position:
               
792-1005
               

               
Cow position:
               
chr13:57770008-57770221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 89
               

               
Conread position:
               
792-1006
               

               
Cow position:
               
chr13:28439390-28439176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 92
               

               
Conread position:
               
793-968
               

               
Cow position:
               
chr13:52913853-52913678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 92
               

               
Conread position:
               
793-993
               

               
Cow position:
               
chr13:24094337-24094542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 87
               

               
Conread position:
               
793-995
               

               
Cow position:
               
chr13:8637678-8637465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 90
               

               
Conread position:
               
793-1000
               

               
Cow position:
               
chr13:20042285-20042490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
110, 84
               

               
Conread position:
               
794-986
               

               
Cow position:
               
chr13:41979170-41979353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
795-993
               

               
Cow position:
               
chr13:30148585-30148778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
47, 87
               

               
Conread position:
               
795-1002
               

               
Cow position:
               
chr13:3153728-3153517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
48, 71
               

               
Conread position:
               
795-1004
               

               
Cow position:
               
chr13:13796833-13797055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
50, 88
               

               
Conread position:
               
795-1006
               

               
Cow position:
               
chr13:9124902-9124689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
50, 67
               

               
Conread position:
               
795-1008
               

               
Cow position:
               
chr13:21024962-21024746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
108, 30
               

               
Conread position:
               
796-1004
               

               
Cow position:
               
chr13:369146-369359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 74
               

               
Conread position:
               
798-979
               

               
Cow position:
               
chr13:6113551-6113741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 85
               

               
Conread position:
               
798-1006
               

               
Cow position:
               
chr13:21246734-21246945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 85
               

               
Conread position:
               
798-1008
               

               
Cow position:
               
chr13:23975192-23975402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
118, 80
               

               
Conread position:
               
799-952
               

               
Cow position:
               
chr13:6975871-6976025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
799-980
               

               
Cow position:
               
chr13:16163556-16163378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
44, 83
               

               
Conread position:
               
799-1005
               

               
Cow position:
               
chr13:42302066-42302272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
799-1006
               

               
Cow position:
               
chr13:11147031-11146820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
46, 84
               

               
Conread position:
               
801-990
               

               
Cow position:
               
chr13:25520943-25521144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
801-997
               

               
Cow position:
               
chr13:57323119-57322920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
5, 82
               

               
Conread position:
               
802-975
               

               
Cow position:
               
chr13:52027166-52027341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 80
               

               
Conread position:
               
802-979
               

               
Cow position:
               
chr13:11565808-11565630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 83
               

               
Conread position:
               
802-1000
               

               
Cow position:
               
chr13:3149459-3149659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
5, 82
               

               
Conread position:
               
803-986
               

               
Cow position:
               
chr13:1363425-1363244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
803-1008
               

               
Cow position:
               
chr13:10040600-10040792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
804-965
               

               
Cow position:
               
chr13:52177570-52177407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 82
               

               
Conread position:
               
804-1004
               

               
Cow position:
               
chr13:37554905-37555104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
804-1006
               

               
Cow position:
               
chr13:3594290-3594096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
805-986
               

               
Cow position:
               
chr13:5092426-5092611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
805-1005
               

               
Cow position:
               
chr13:8537790-8537584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
40, 78
               

               
Conread position:
               
805-1006
               

               
Cow position:
               
chr13:28605422-28605629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
807-1008
               

               
Cow position:
               
chr13:48127074-48126865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 76
               

               
Conread position:
               
808-990
               

               
Cow position:
               
chr13:54127866-54128051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 66
               

               
Conread position:
               
812-985
               

               
Cow position:
               
chr13:33517995-33518174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 50
               

               
Conread position:
               
812-986
               

               
Cow position:
               
chr13:8367676-8367502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
26, 70
               

               
Conread position:
               
815-972
               

               
Cow position:
               
chr13:43576972-43576808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
816-1001
               

               
Cow position:
               
chr13:1339184-1339372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
818-986
               

               
Cow position:
               
chr13:55143228-55143058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
27, 79
               

               
Conread position:
               
818-1000
               

               
Cow position:
               
chr13:37405666-37405485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
27, 69
               

               
Conread position:
               
818-1006
               

               
Cow position:
               
chr13:37946434-37946625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
819-989
               

               
Cow position:
               
chr13:16525269-16525448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
820-1002
               

               
Cow position:
               
chr13:53619957-53619771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
821-1004
               

               
Cow position:
               
chr13:23823082-23823264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
826-986
               

               
Cow position:
               
chr13:10986554-10986724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
827-967
               

               
Cow position:
               
chr13:57446173-57446310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
18, 58
               

               
Conread position:
               
827-980
               

               
Cow position:
               
chr13:21070950-21070794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
834-1006
               

               
Cow position:
               
chr13:14782276-14782112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
840-989
               

               
Cow position:
               
chr13:11439099-11439246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
133, 36
               

               
Conread position:
               
840-993
               

               
Cow position:
               
chr13:29665949-29665795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
842-962
               

               
Cow position:
               
chr13:1037565-1037445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
842-978
               

               
Cow position:
               
chr13:23399692-23399558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
842-979
               

               
Cow position:
               
chr13:20854530-20854669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
842-979
               

               
Cow position:
               
chr13:45141996-45142145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
842-982
               

               
Cow position:
               
chr13:7097512-7097374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
842-986
               

               
Cow position:
               
chr13:9108749-9108888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
842-993
               

               
Cow position:
               
chr13:23478828-23478677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
842-999
               

               
Cow position:
               
chr13:53847195-53847346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
842-1000
               

               
Cow position:
               
chr13:5659841-5659993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
842-1000
               

               
Cow position:
               
chr13:25313223-25313380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
842-1001
               

               
Cow position:
               
chr13:6951505-6951352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
842-1004
               

               
Cow position:
               
chr13:28081648-28081480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
842-1006
               

               
Cow position:
               
chr13:8423331-8423163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
74, 36
               

               
Conread position:
               
842-1007
               

               
Cow position:
               
chr13:9551287-9551128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
843-1006
               

               
Cow position:
               
chr13:242560-242393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
73, 35
               

               
Conread position:
               
843-1007
               

               
Cow position:
               
chr13:3003400-3003246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
153, 36
               

               
Conread position:
               
845-1000
               

               
Cow position:
               
chr13:27146747-27146591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
71, 31
               
Show alignments to all cow chromosomes.