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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8023F22.3
        

               
Conread position:
               
390-986
               

               
Cow position:
               
chr17:15684154-15684746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
512-1003
               

               
Cow position:
               
chr17:17222116-17222601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 46
               

               
Conread position:
               
516-809
               

               
Cow position:
               
chr17:1526579-1526289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
185, 13
               

               
Conread position:
               
529-999
               

               
Cow position:
               
chr17:29356428-29355988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 35
               

               
Conread position:
               
539-885
               

               
Cow position:
               
chr17:3503386-3503723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
168, 78
               

               
Conread position:
               
540-870
               

               
Cow position:
               
chr17:3781847-3782171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
178, 18
               

               
Conread position:
               
542-986
               

               
Cow position:
               
chr17:14033838-14033398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 20
               

               
Conread position:
               
545-1007
               

               
Cow position:
               
chr17:12306589-12306133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 27
               

               
Conread position:
               
546-986
               

               
Cow position:
               
chr17:12536662-12536231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 70
               

               
Conread position:
               
547-764
               

               
Cow position:
               
chr17:18884543-18884319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
550-735
               

               
Cow position:
               
chr17:24876950-24877130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
158, 11
               

               
Conread position:
               
550-750
               

               
Cow position:
               
chr17:22781498-22781696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
158, 71
               

               
Conread position:
               
550-817
               

               
Cow position:
               
chr17:24761417-24761158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
7, 70
               

               
Conread position:
               
551-894
               

               
Cow position:
               
chr17:9565121-9565451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 71
               

               
Conread position:
               
551-914
               

               
Cow position:
               
chr17:8544118-8544476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 72
               

               
Conread position:
               
551-944
               

               
Cow position:
               
chr17:14249208-14248812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
54, 11
               

               
Conread position:
               
551-978
               

               
Cow position:
               
chr17:1035789-1035359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 67
               

               
Conread position:
               
551-993
               

               
Cow position:
               
chr17:25608694-25608268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
157, 81
               

               
Conread position:
               
551-996
               

               
Cow position:
               
chr17:33275934-33275507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 79
               

               
Conread position:
               
552-897
               

               
Cow position:
               
chr17:12590976-12591328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 57
               

               
Conread position:
               
553-752
               

               
Cow position:
               
chr17:21707213-21707009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
65, 125
               

               
Conread position:
               
556-800
               

               
Cow position:
               
chr17:21697549-21697784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
144, 62
               

               
Conread position:
               
558-899
               

               
Cow position:
               
chr17:19891434-19891780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
140, 77
               

               
Conread position:
               
558-910
               

               
Cow position:
               
chr17:38200946-38200596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
150, 78
               

               
Conread position:
               
560-789
               

               
Cow position:
               
chr17:4824315-4824531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
140, 41
               

               
Conread position:
               
560-797
               

               
Cow position:
               
chr17:33926304-33926073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
175, 56
               

               
Conread position:
               
560-806
               

               
Cow position:
               
chr17:2839711-2839968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
82, 121
               

               
Conread position:
               
560-893
               

               
Cow position:
               
chr17:5688527-5688223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
148, 42
               

               
Conread position:
               
560-896
               

               
Cow position:
               
chr17:41892247-41891909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
90, 61
               

               
Conread position:
               
560-969
               

               
Cow position:
               
chr17:20848351-20848750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
560-1000
               

               
Cow position:
               
chr17:12289594-12289157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 61
               

               
Conread position:
               
560-1003
               

               
Cow position:
               
chr17:25875233-25875654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
112, 52
               

               
Conread position:
               
561-752
               

               
Cow position:
               
chr17:21017616-21017802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
146, 57
               

               
Conread position:
               
561-753
               

               
Cow position:
               
chr17:25168132-25168321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
60, 88
               

               
Conread position:
               
561-782
               

               
Cow position:
               
chr17:11056552-11056333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
140, 52
               

               
Conread position:
               
561-787
               

               
Cow position:
               
chr17:42347399-42347184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
147, 51
               

               
Conread position:
               
561-798
               

               
Cow position:
               
chr17:21312983-21312758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
144, 49
               

               
Conread position:
               
561-800
               

               
Cow position:
               
chr17:5246717-5246947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
115, 49
               

               
Conread position:
               
561-809
               

               
Cow position:
               
chr17:27305980-27306222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
561-818
               

               
Cow position:
               
chr17:24549991-24550248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
561-819
               

               
Cow position:
               
chr17:9778073-9778315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
144, 48
               

               
Conread position:
               
561-820
               

               
Cow position:
               
chr17:44232898-44232639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
561-821
               

               
Cow position:
               
chr17:966917-966672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
144, 51
               

               
Conread position:
               
561-838
               

               
Cow position:
               
chr17:27679422-27679141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
116, 57
               

               
Conread position:
               
561-843
               

               
Cow position:
               
chr17:34595761-34596036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
174, 61
               

               
Conread position:
               
561-854
               

               
Cow position:
               
chr17:1275341-1275635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
561-865
               

               
Cow position:
               
chr17:32651438-32651738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 60
               

               
Conread position:
               
561-873
               

               
Cow position:
               
chr17:38646886-38647192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
147, 62
               

               
Conread position:
               
561-874
               

               
Cow position:
               
chr17:31231292-31230991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 38
               

               
Conread position:
               
561-877
               

               
Cow position:
               
chr17:11171617-11171926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
174, 60
               

               
Conread position:
               
561-884
               

               
Cow position:
               
chr17:14848701-14848405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
198, 57
               

               
Conread position:
               
561-894
               

               
Cow position:
               
chr17:7760641-7760322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
144, 53
               

               
Conread position:
               
561-900
               

               
Cow position:
               
chr17:41029775-41030094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
147, 62
               

               
Conread position:
               
561-901
               

               
Cow position:
               
chr17:22806719-22806385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
84, 57
               

               
Conread position:
               
561-901
               

               
Cow position:
               
chr17:24580478-24580137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 61
               

               
Conread position:
               
561-902
               

               
Cow position:
               
chr17:21243965-21243631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
172, 60
               

               
Conread position:
               
561-904
               

               
Cow position:
               
chr17:26764835-26765184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
147, 57
               

               
Conread position:
               
561-905
               

               
Cow position:
               
chr17:2662231-2662585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
61, 201
               

               
Conread position:
               
561-906
               

               
Cow position:
               
chr17:38832864-38833206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
561-907
               

               
Cow position:
               
chr17:24553826-24554161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
284, 61
               

               
Conread position:
               
561-910
               

               
Cow position:
               
chr17:37482257-37481905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
144, 60
               

               
Conread position:
               
561-910
               

               
Cow position:
               
chr17:40289182-40288834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 71
               

               
Conread position:
               
561-914
               

               
Cow position:
               
chr17:9911585-9911928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
561-915
               

               
Cow position:
               
chr17:553149-552796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
51, 86
               

               
Conread position:
               
561-923
               

               
Cow position:
               
chr17:21755619-21755255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 201
               

               
Conread position:
               
561-927
               

               
Cow position:
               
chr17:9746340-9746697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 60
               

               
Conread position:
               
561-938
               

               
Cow position:
               
chr17:6624080-6624424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
146, 62
               

               
Conread position:
               
561-939
               

               
Cow position:
               
chr17:1493333-1492950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
561-960
               

               
Cow position:
               
chr17:19998957-19999334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
143, 62
               

               
Conread position:
               
561-960
               

               
Cow position:
               
chr17:21434907-21434511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
561-962
               

               
Cow position:
               
chr17:12108625-12109027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 43
               

               
Conread position:
               
561-963
               

               
Cow position:
               
chr17:2810443-2810853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
174, 118
               

               
Conread position:
               
561-966
               

               
Cow position:
               
chr17:11281284-11280866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 15
               

               
Conread position:
               
561-968
               

               
Cow position:
               
chr17:23101389-23100997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
98, 49
               

               
Conread position:
               
561-972
               

               
Cow position:
               
chr17:10528919-10528501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
116, 60
               

               
Conread position:
               
561-972
               

               
Cow position:
               
chr17:33052685-33053083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
146, 51
               

               
Conread position:
               
561-979
               

               
Cow position:
               
chr17:908568-908975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 60
               

               
Conread position:
               
561-979
               

               
Cow position:
               
chr17:13922297-13922718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 49
               

               
Conread position:
               
561-979
               

               
Cow position:
               
chr17:24824074-24824482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
282, 60
               

               
Conread position:
               
561-979
               

               
Cow position:
               
chr17:32554204-32553814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
355, 62
               

               
Conread position:
               
561-980
               

               
Cow position:
               
chr17:1063011-1063406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
253, 57
               

               
Conread position:
               
561-980
               

               
Cow position:
               
chr17:29292545-29292153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 48
               

               
Conread position:
               
561-980
               

               
Cow position:
               
chr17:40312543-40312936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 48
               

               
Conread position:
               
561-980
               

               
Cow position:
               
chr17:41290196-41289807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 35
               

               
Conread position:
               
561-982
               

               
Cow position:
               
chr17:5767736-5768133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 60
               

               
Conread position:
               
561-982
               

               
Cow position:
               
chr17:43717491-43717101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 49
               

               
Conread position:
               
561-985
               

               
Cow position:
               
chr17:20022695-20022272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
147, 48
               

               
Conread position:
               
561-986
               

               
Cow position:
               
chr17:923700-924105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 62
               

               
Conread position:
               
561-986
               

               
Cow position:
               
chr17:9853808-9854225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 61
               

               
Conread position:
               
561-986
               

               
Cow position:
               
chr17:11832317-11831875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 115
               

               
Conread position:
               
561-986
               

               
Cow position:
               
chr17:24787199-24786782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 61
               

               
Conread position:
               
561-986
               

               
Cow position:
               
chr17:29715364-29714971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
210, 51
               

               
Conread position:
               
561-986
               

               
Cow position:
               
chr17:32993792-32993384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
174, 48
               

               
Conread position:
               
561-986
               

               
Cow position:
               
chr17:34948463-34948880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 56
               

               
Conread position:
               
561-987
               

               
Cow position:
               
chr17:22564005-22564423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 47
               

               
Conread position:
               
561-987
               

               
Cow position:
               
chr17:27429400-27429800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
172, 49
               

               
Conread position:
               
561-993
               

               
Cow position:
               
chr17:21293223-21292790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 69
               

               
Conread position:
               
561-994
               

               
Cow position:
               
chr17:16371073-16371512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 60
               

               
Conread position:
               
561-997
               

               
Cow position:
               
chr17:8837127-8836695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 44
               

               
Conread position:
               
561-1000
               

               
Cow position:
               
chr17:24587440-24587879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 62
               

               
Conread position:
               
561-1000
               

               
Cow position:
               
chr17:30665094-30665524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 48
               

               
Conread position:
               
561-1001
               

               
Cow position:
               
chr17:6936841-6936417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 55
               

               
Conread position:
               
561-1003
               

               
Cow position:
               
chr17:1256682-1256239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
147, 60
               

               
Conread position:
               
561-1003
               

               
Cow position:
               
chr17:5423250-5422817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 20
               

               
Conread position:
               
561-1003
               

               
Cow position:
               
chr17:12946544-12946103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 70
               

               
Conread position:
               
561-1003
               

               
Cow position:
               
chr17:17179858-17180304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
70, 35
               

               
Conread position:
               
561-1003
               

               
Cow position:
               
chr17:26230761-26231222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 61
               

               
Conread position:
               
561-1004
               

               
Cow position:
               
chr17:7132633-7132160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 62
               

               
Conread position:
               
561-1004
               

               
Cow position:
               
chr17:32419296-32418855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 62
               

               
Conread position:
               
561-1005
               

               
Cow position:
               
chr17:11381898-11381463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
561-1005
               

               
Cow position:
               
chr17:11618402-11618849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 61
               

               
Conread position:
               
561-1005
               

               
Cow position:
               
chr17:40741469-40741916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 62
               

               
Conread position:
               
561-1006
               

               
Cow position:
               
chr17:3577360-3577791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
193, 62
               

               
Conread position:
               
561-1006
               

               
Cow position:
               
chr17:11839520-11839990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 45
               

               
Conread position:
               
561-1006
               

               
Cow position:
               
chr17:15664491-15664937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 50
               

               
Conread position:
               
561-1006
               

               
Cow position:
               
chr17:27795470-27795915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 24
               

               
Conread position:
               
561-1008
               

               
Cow position:
               
chr17:4213578-4214003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
260, 60
               

               
Conread position:
               
561-1008
               

               
Cow position:
               
chr17:7697875-7698308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 61
               

               
Conread position:
               
561-1008
               

               
Cow position:
               
chr17:20234049-20234461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 37
               

               
Conread position:
               
561-1008
               

               
Cow position:
               
chr17:21739062-21738603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 60
               

               
Conread position:
               
562-706
               

               
Cow position:
               
chr17:16117605-16117466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
562-800
               

               
Cow position:
               
chr17:1295748-1295518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
145, 64
               

               
Conread position:
               
562-800
               

               
Cow position:
               
chr17:26224340-26224562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
172, 48
               

               
Conread position:
               
562-910
               

               
Cow position:
               
chr17:9117466-9117809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 56
               

               
Conread position:
               
562-951
               

               
Cow position:
               
chr17:24149000-24149395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
115, 59
               

               
Conread position:
               
562-982
               

               
Cow position:
               
chr17:6566294-6566723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 45
               

               
Conread position:
               
562-993
               

               
Cow position:
               
chr17:11664768-11664328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 46
               

               
Conread position:
               
562-1004
               

               
Cow position:
               
chr17:23063535-23063982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
115, 59
               

               
Conread position:
               
562-1006
               

               
Cow position:
               
chr17:25999939-26000380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
562-1008
               

               
Cow position:
               
chr17:12325923-12325505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
205, 47
               

               
Conread position:
               
565-815
               

               
Cow position:
               
chr17:3471247-3471487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
142, 40
               

               
Conread position:
               
565-910
               

               
Cow position:
               
chr17:25796514-25796168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
140, 58
               

               
Conread position:
               
565-949
               

               
Cow position:
               
chr17:9697875-9697474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
143, 12
               

               
Conread position:
               
565-968
               

               
Cow position:
               
chr17:39771222-39771627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
171, 57
               

               
Conread position:
               
565-986
               

               
Cow position:
               
chr17:20993213-20992795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 44
               

               
Conread position:
               
565-989
               

               
Cow position:
               
chr17:12929717-12929282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 49
               

               
Conread position:
               
565-1000
               

               
Cow position:
               
chr17:27058728-27058292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
568-984
               

               
Cow position:
               
chr17:30359307-30359698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
102, 28
               

               
Conread position:
               
569-987
               

               
Cow position:
               
chr17:24883738-24883326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 44
               

               
Conread position:
               
570-980
               

               
Cow position:
               
chr17:7142694-7143094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 43
               

               
Conread position:
               
571-753
               

               
Cow position:
               
chr17:11386346-11386522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
99, 50
               

               
Conread position:
               
571-790
               

               
Cow position:
               
chr17:5896079-5895867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
134, 56
               

               
Conread position:
               
571-798
               

               
Cow position:
               
chr17:35311253-35311478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
99, 51
               

               
Conread position:
               
571-800
               

               
Cow position:
               
chr17:242468-242691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 39
               

               
Conread position:
               
571-810
               

               
Cow position:
               
chr17:34207988-34207752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
571-817
               

               
Cow position:
               
chr17:32950104-32950345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
571-820
               

               
Cow position:
               
chr17:26183054-26183301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
571-829
               

               
Cow position:
               
chr17:15333879-15333628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
571-830
               

               
Cow position:
               
chr17:12059259-12059010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
571-841
               

               
Cow position:
               
chr17:21628314-21628572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
107, 50
               

               
Conread position:
               
571-843
               

               
Cow position:
               
chr17:34316877-34316621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
137, 39
               

               
Conread position:
               
571-879
               

               
Cow position:
               
chr17:20839729-20839434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
137, 47
               

               
Conread position:
               
571-885
               

               
Cow position:
               
chr17:13143858-13143554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
136, 52
               

               
Conread position:
               
571-897
               

               
Cow position:
               
chr17:11156661-11156340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 51
               

               
Conread position:
               
571-897
               

               
Cow position:
               
chr17:39012550-39012871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
120, 50
               

               
Conread position:
               
571-901
               

               
Cow position:
               
chr17:21495206-21495529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
571-902
               

               
Cow position:
               
chr17:21680600-21680938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
164, 50
               

               
Conread position:
               
571-904
               

               
Cow position:
               
chr17:20990362-20990029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
137, 50
               

               
Conread position:
               
571-907
               

               
Cow position:
               
chr17:265488-265834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 110
               

               
Conread position:
               
571-907
               

               
Cow position:
               
chr17:1410411-1410073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
135, 47
               

               
Conread position:
               
571-907
               

               
Cow position:
               
chr17:17405970-17406299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
162, 47
               

               
Conread position:
               
571-909
               

               
Cow position:
               
chr17:30718587-30718252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
571-910
               

               
Cow position:
               
chr17:29157250-29157583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
165, 42
               

               
Conread position:
               
571-922
               

               
Cow position:
               
chr17:24821698-24822040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
162, 52
               

               
Conread position:
               
571-938
               

               
Cow position:
               
chr17:21335866-21335498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 47
               

               
Conread position:
               
571-944
               

               
Cow position:
               
chr17:25097294-25097654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 30
               

               
Conread position:
               
571-947
               

               
Cow position:
               
chr17:12220106-12219742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
137, 39
               

               
Conread position:
               
571-979
               

               
Cow position:
               
chr17:22032862-22032452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
571-979
               

               
Cow position:
               
chr17:36331134-36330731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
47, 11
               

               
Conread position:
               
571-979
               

               
Cow position:
               
chr17:40331597-40332015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
137, 50
               

               
Conread position:
               
571-982
               

               
Cow position:
               
chr17:11296467-11296878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 40
               

               
Conread position:
               
571-985
               

               
Cow position:
               
chr17:25189111-25189529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
571-986
               

               
Cow position:
               
chr17:25128517-25128111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 8
               

               
Conread position:
               
571-988
               

               
Cow position:
               
chr17:32279075-32278658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 51
               

               
Conread position:
               
571-992
               

               
Cow position:
               
chr17:5898693-5898276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
571-992
               

               
Cow position:
               
chr17:21003999-21003582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
136, 51
               

               
Conread position:
               
571-992
               

               
Cow position:
               
chr17:24077234-24077647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 8
               

               
Conread position:
               
571-998
               

               
Cow position:
               
chr17:4601716-4601307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
136, 37
               

               
Conread position:
               
571-999
               

               
Cow position:
               
chr17:11397498-11397919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 51
               

               
Conread position:
               
571-1000
               

               
Cow position:
               
chr17:20932161-20932586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 52
               

               
Conread position:
               
571-1001
               

               
Cow position:
               
chr17:18860887-18860486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 41
               

               
Conread position:
               
571-1002
               

               
Cow position:
               
chr17:11101962-11101557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 46
               

               
Conread position:
               
571-1003
               

               
Cow position:
               
chr17:26818621-26818215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
208, 47
               

               
Conread position:
               
571-1004
               

               
Cow position:
               
chr17:15103056-15102632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 52
               

               
Conread position:
               
571-1004
               

               
Cow position:
               
chr17:30529704-30529287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
164, 21
               

               
Conread position:
               
571-1005
               

               
Cow position:
               
chr17:21973301-21972861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 50
               

               
Conread position:
               
571-1007
               

               
Cow position:
               
chr17:6423592-6424013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 30
               

               
Conread position:
               
571-1008
               

               
Cow position:
               
chr17:39412668-39412236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
135, 50
               

               
Conread position:
               
572-907
               

               
Cow position:
               
chr17:32273851-32273523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
136, 36
               

               
Conread position:
               
572-910
               

               
Cow position:
               
chr17:8079147-8079479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 46
               

               
Conread position:
               
572-913
               

               
Cow position:
               
chr17:20870266-20869939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
135, 43
               

               
Conread position:
               
572-918
               

               
Cow position:
               
chr17:23246043-23246374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
135, 46
               

               
Conread position:
               
572-943
               

               
Cow position:
               
chr17:18109253-18108886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
135, 40
               

               
Conread position:
               
572-978
               

               
Cow position:
               
chr17:40771663-40772065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 41
               

               
Conread position:
               
572-996
               

               
Cow position:
               
chr17:25611926-25612340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
573-724
               

               
Cow position:
               
chr17:14088493-14088346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
573-906
               

               
Cow position:
               
chr17:18592274-18592606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
152, 45
               

               
Conread position:
               
573-975
               

               
Cow position:
               
chr17:24973785-24974175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 49
               

               
Conread position:
               
573-986
               

               
Cow position:
               
chr17:34079264-34078864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
271, 45
               

               
Conread position:
               
573-998
               

               
Cow position:
               
chr17:10459102-10458681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 43
               

               
Conread position:
               
573-1000
               

               
Cow position:
               
chr17:32027628-32027192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 39
               

               
Conread position:
               
573-1004
               

               
Cow position:
               
chr17:32471960-32471529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
107, 48
               

               
Conread position:
               
573-1006
               

               
Cow position:
               
chr17:25901029-25901473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
135, 34
               

               
Conread position:
               
574-905
               

               
Cow position:
               
chr17:979318-979007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
133, 36
               

               
Conread position:
               
574-968
               

               
Cow position:
               
chr17:18419507-18419910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
131, 49
               

               
Conread position:
               
574-1004
               

               
Cow position:
               
chr17:31481210-31480773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 50
               

               
Conread position:
               
575-938
               

               
Cow position:
               
chr17:4612241-4611865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
115, 47
               

               
Conread position:
               
575-982
               

               
Cow position:
               
chr17:15188245-15187830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
129, 46
               

               
Conread position:
               
577-804
               

               
Cow position:
               
chr17:33121929-33122149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
128, 46
               

               
Conread position:
               
577-807
               

               
Cow position:
               
chr17:26881499-26881271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
131, 43
               

               
Conread position:
               
577-815
               

               
Cow position:
               
chr17:21298062-21298300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
92, 32
               

               
Conread position:
               
577-888
               

               
Cow position:
               
chr17:5006649-5006343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
130, 44
               

               
Conread position:
               
577-978
               

               
Cow position:
               
chr17:1562936-1562556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 46
               

               
Conread position:
               
577-979
               

               
Cow position:
               
chr17:4106148-4105756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
264, 45
               

               
Conread position:
               
577-979
               

               
Cow position:
               
chr17:4121884-4121491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
185, 45
               

               
Conread position:
               
577-992
               

               
Cow position:
               
chr17:20780348-20780774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
577-1000
               

               
Cow position:
               
chr17:1783771-1783367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 45
               

               
Conread position:
               
577-1008
               

               
Cow position:
               
chr17:20033078-20032641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
128, 35
               

               
Conread position:
               
578-971
               

               
Cow position:
               
chr17:21415000-21414602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
127, 45
               

               
Conread position:
               
578-971
               

               
Cow position:
               
chr17:21437483-21437085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
127, 45
               

               
Conread position:
               
578-1007
               

               
Cow position:
               
chr17:25916731-25917150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 38
               

               
Conread position:
               
579-1006
               

               
Cow position:
               
chr17:26631976-26631540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
126, 44
               

               
Conread position:
               
580-840
               

               
Cow position:
               
chr17:27549987-27549735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
104, 60
               

               
Conread position:
               
580-1008
               

               
Cow position:
               
chr17:28467977-28468389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 43
               

               
Conread position:
               
581-781
               

               
Cow position:
               
chr17:20928752-20928946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
124, 41
               

               
Conread position:
               
581-840
               

               
Cow position:
               
chr17:10020957-10020698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
124, 31
               

               
Conread position:
               
581-907
               

               
Cow position:
               
chr17:27048001-27048319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 41
               

               
Conread position:
               
581-1008
               

               
Cow position:
               
chr17:13940480-13940054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
127, 39
               

               
Conread position:
               
582-972
               

               
Cow position:
               
chr17:5514598-5514986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 40
               

               
Conread position:
               
582-1005
               

               
Cow position:
               
chr17:18146025-18146454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 41
               

               
Conread position:
               
587-986
               

               
Cow position:
               
chr17:30713194-30713589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
125, 26
               

               
Conread position:
               
590-1004
               

               
Cow position:
               
chr17:25117741-25118147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
118, 14
               

               
Conread position:
               
591-1007
               

               
Cow position:
               
chr17:21599833-21599420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
114, 13
               

               
Conread position:
               
592-960
               

               
Cow position:
               
chr17:6328961-6329329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 30
               

               
Conread position:
               
605-972
               

               
Cow position:
               
chr17:11962692-11962305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
79, 65
               

               
Conread position:
               
609-979
               

               
Cow position:
               
chr17:40673248-40673609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
234, 13
               

               
Conread position:
               
612-1002
               

               
Cow position:
               
chr17:33271823-33271410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
68, 38
               

               
Conread position:
               
613-843
               

               
Cow position:
               
chr17:14762254-14762026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
87, 66
               

               
Conread position:
               
613-967
               

               
Cow position:
               
chr17:14026050-14025683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 7
               

               
Conread position:
               
613-988
               

               
Cow position:
               
chr17:32280535-32280914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
95, 9
               

               
Conread position:
               
613-1005
               

               
Cow position:
               
chr17:9966163-9965760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
95, 59
               

               
Conread position:
               
613-1008
               

               
Cow position:
               
chr17:30728387-30728770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
614-1003
               

               
Cow position:
               
chr17:6318990-6318611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
119, 8
               

               
Conread position:
               
615-936
               

               
Cow position:
               
chr17:27833493-27833168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 7
               

               
Conread position:
               
616-986
               

               
Cow position:
               
chr17:20157479-20157851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
142, 66
               

               
Conread position:
               
617-980
               

               
Cow position:
               
chr17:37699487-37699103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 134
               

               
Conread position:
               
619-977
               

               
Cow position:
               
chr17:1634616-1634259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
148, 29
               

               
Conread position:
               
619-1000
               

               
Cow position:
               
chr17:3467638-3468006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
226, 53
               

               
Conread position:
               
620-986
               

               
Cow position:
               
chr17:32989357-32989716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
115, 24
               

               
Conread position:
               
620-1004
               

               
Cow position:
               
chr17:21743807-21744198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 55
               

               
Conread position:
               
622-982
               

               
Cow position:
               
chr17:21115076-21114716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
130, 50
               

               
Conread position:
               
622-985
               

               
Cow position:
               
chr17:4300044-4299700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
205, 17
               

               
Conread position:
               
622-993
               

               
Cow position:
               
chr17:25815478-25815844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
113, 58
               

               
Conread position:
               
622-1000
               

               
Cow position:
               
chr17:18720579-18720197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 61
               

               
Conread position:
               
622-1002
               

               
Cow position:
               
chr17:18201633-18202020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
127, 57
               

               
Conread position:
               
623-904
               

               
Cow position:
               
chr17:38363109-38362837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 20
               

               
Conread position:
               
623-1006
               

               
Cow position:
               
chr17:20874265-20874659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
47, 59
               

               
Conread position:
               
624-810
               

               
Cow position:
               
chr17:9079321-9079141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
624-993
               

               
Cow position:
               
chr17:24559169-24559543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
83, 46
               

               
Conread position:
               
626-800
               

               
Cow position:
               
chr17:30734414-30734241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 47
               

               
Conread position:
               
626-1006
               

               
Cow position:
               
chr17:32138536-32138153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 24
               

               
Conread position:
               
627-905
               

               
Cow position:
               
chr17:7136861-7137149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
80, 52
               

               
Conread position:
               
628-967
               

               
Cow position:
               
chr17:25594823-25594464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
628-979
               

               
Cow position:
               
chr17:9056820-9056463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 26
               

               
Conread position:
               
629-905
               

               
Cow position:
               
chr17:33658189-33657907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
79, 43
               

               
Conread position:
               
629-986
               

               
Cow position:
               
chr17:31037499-31037134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
79, 40
               

               
Conread position:
               
630-993
               

               
Cow position:
               
chr17:7803288-7802924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
105, 6
               

               
Conread position:
               
631-843
               

               
Cow position:
               
chr17:14060893-14060678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 165
               

               
Conread position:
               
631-859
               

               
Cow position:
               
chr17:28539912-28540145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
77, 48
               

               
Conread position:
               
631-899
               

               
Cow position:
               
chr17:39736064-39736331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
135, 41
               

               
Conread position:
               
631-902
               

               
Cow position:
               
chr17:8690559-8690294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
631-902
               

               
Cow position:
               
chr17:39857276-39857544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
77, 49
               

               
Conread position:
               
631-939
               

               
Cow position:
               
chr17:6848688-6848990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
29, 42
               

               
Conread position:
               
631-966
               

               
Cow position:
               
chr17:1113768-1114121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
38, 121
               

               
Conread position:
               
631-978
               

               
Cow position:
               
chr17:5144284-5143937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
21, 49
               

               
Conread position:
               
631-978
               

               
Cow position:
               
chr17:17410172-17410535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 256
               

               
Conread position:
               
631-978
               

               
Cow position:
               
chr17:32348957-32349298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
631-979
               

               
Cow position:
               
chr17:27184057-27183706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
76, 8
               

               
Conread position:
               
631-984
               

               
Cow position:
               
chr17:1040629-1040969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
631-986
               

               
Cow position:
               
chr17:11216008-11215650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 41
               

               
Conread position:
               
631-986
               

               
Cow position:
               
chr17:31856546-31856915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 261
               

               
Conread position:
               
631-1000
               

               
Cow position:
               
chr17:20884406-20884781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
632-843
               

               
Cow position:
               
chr17:7654568-7654356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
76, 11
               

               
Conread position:
               
632-976
               

               
Cow position:
               
chr17:2034422-2034732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
103, 27
               

               
Conread position:
               
632-1005
               

               
Cow position:
               
chr17:42419607-42419965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 50
               

               
Conread position:
               
633-883
               

               
Cow position:
               
chr17:23563904-23563654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
633-988
               

               
Cow position:
               
chr17:13244156-13243810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
633-1004
               

               
Cow position:
               
chr17:17683015-17682654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 12
               

               
Conread position:
               
634-876
               

               
Cow position:
               
chr17:23798168-23798416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
635-802
               

               
Cow position:
               
chr17:14883197-14883027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
72, 45
               

               
Conread position:
               
635-967
               

               
Cow position:
               
chr17:11215342-11215009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 62
               

               
Conread position:
               
640-964
               

               
Cow position:
               
chr17:18920458-18920148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
195, 38
               

               
Conread position:
               
643-836
               

               
Cow position:
               
chr17:484491-484687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
644-914
               

               
Cow position:
               
chr17:34751509-34751236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
67, 28
               

               
Conread position:
               
648-821
               

               
Cow position:
               
chr17:17266994-17266817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
59, 31
               

               
Conread position:
               
648-967
               

               
Cow position:
               
chr17:10432076-10431740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
54, 18
               

               
Conread position:
               
649-914
               

               
Cow position:
               
chr17:15340851-15340581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
649-979
               

               
Cow position:
               
chr17:33933847-33933512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
649-1000
               

               
Cow position:
               
chr17:7590558-7590202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
29, 48
               

               
Conread position:
               
649-1000
               

               
Cow position:
               
chr17:21325234-21325598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
649-1007
               

               
Cow position:
               
chr17:11912596-11912243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
115, 23
               

               
Conread position:
               
650-987
               

               
Cow position:
               
chr17:20335564-20335888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
650-990
               

               
Cow position:
               
chr17:25514221-25513870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
650-1003
               

               
Cow position:
               
chr17:29472371-29472716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
115, 29
               

               
Conread position:
               
651-971
               

               
Cow position:
               
chr17:26789326-26789643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
652-1004
               

               
Cow position:
               
chr17:36864535-36864882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 26
               

               
Conread position:
               
656-1006
               

               
Cow position:
               
chr17:21489716-21489370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
657-899
               

               
Cow position:
               
chr17:13638543-13638780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
659-907
               

               
Cow position:
               
chr17:23517031-23516779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
659-907
               

               
Cow position:
               
chr17:27203133-27202884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
659-914
               

               
Cow position:
               
chr17:21922711-21922462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
186, 20
               

               
Conread position:
               
660-950
               

               
Cow position:
               
chr17:2275386-2275673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 10
               

               
Conread position:
               
660-967
               

               
Cow position:
               
chr17:5350207-5349899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
94, 20
               

               
Conread position:
               
660-1000
               

               
Cow position:
               
chr17:25342828-25342484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
669-993
               

               
Cow position:
               
chr17:17193413-17193740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 89
               

               
Conread position:
               
670-1008
               

               
Cow position:
               
chr17:1469298-1469628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
671-912
               

               
Cow position:
               
chr17:39715080-39715325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
672-986
               

               
Cow position:
               
chr17:29025990-29026318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
36, 94
               

               
Conread position:
               
672-1005
               

               
Cow position:
               
chr17:22057100-22056752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
36, 52
               

               
Conread position:
               
673-916
               

               
Cow position:
               
chr17:23883333-23883095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
31, 63
               

               
Conread position:
               
673-1003
               

               
Cow position:
               
chr17:9824592-9824929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 68
               

               
Conread position:
               
674-998
               

               
Cow position:
               
chr17:22127851-22128176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
63, 36
               

               
Conread position:
               
674-1001
               

               
Cow position:
               
chr17:7571022-7571364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
47, 59
               

               
Conread position:
               
676-1003
               

               
Cow position:
               
chr17:11995105-11994759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
32, 214
               

               
Conread position:
               
676-1003
               

               
Cow position:
               
chr17:21806523-21806189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
680-906
               

               
Cow position:
               
chr17:9487235-9487456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
165, 51
               

               
Conread position:
               
681-979
               

               
Cow position:
               
chr17:1025889-1025598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
681-1008
               

               
Cow position:
               
chr17:34791135-34790804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
27, 80
               

               
Conread position:
               
682-1006
               

               
Cow position:
               
chr17:7692996-7693330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
26, 76
               

               
Conread position:
               
682-1008
               

               
Cow position:
               
chr17:36814292-36814627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
26, 205
               

               
Conread position:
               
683-911
               

               
Cow position:
               
chr17:38263559-38263321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
5, 206
               

               
Conread position:
               
685-903
               

               
Cow position:
               
chr17:25032548-25032322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
685-918
               

               
Cow position:
               
chr17:16616754-16616986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
50, 73
               

               
Conread position:
               
685-986
               

               
Cow position:
               
chr17:3153636-3153325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
687-986
               

               
Cow position:
               
chr17:36275275-36275579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
21, 61
               

               
Conread position:
               
689-999
               

               
Cow position:
               
chr17:25126293-25126598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 82
               

               
Conread position:
               
689-1004
               

               
Cow position:
               
chr17:37816249-37815928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
46, 70
               

               
Conread position:
               
691-997
               

               
Cow position:
               
chr17:5372588-5372278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
11, 210
               

               
Conread position:
               
693-909
               

               
Cow position:
               
chr17:16158434-16158655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
19, 194
               

               
Conread position:
               
694-979
               

               
Cow position:
               
chr17:39606376-39606658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
73, 40
               

               
Conread position:
               
694-1005
               

               
Cow position:
               
chr17:31465305-31464999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 100
               

               
Conread position:
               
695-906
               

               
Cow position:
               
chr17:12880542-12880757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 51
               

               
Conread position:
               
695-1005
               

               
Cow position:
               
chr17:33067613-33067305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
697-978
               

               
Cow position:
               
chr17:40384255-40383971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
38, 103
               

               
Conread position:
               
699-993
               

               
Cow position:
               
chr17:12959058-12959356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
701-870
               

               
Cow position:
               
chr17:22245945-22246117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
701-984
               

               
Cow position:
               
chr17:22051639-22051350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
701-986
               

               
Cow position:
               
chr17:40355205-40355504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
10, 189
               

               
Conread position:
               
701-1006
               

               
Cow position:
               
chr17:21039517-21039818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
142, 33
               

               
Conread position:
               
706-968
               

               
Cow position:
               
chr17:949933-950200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
706-982
               

               
Cow position:
               
chr17:26802980-26802688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
47, 23
               

               
Conread position:
               
706-986
               

               
Cow position:
               
chr17:26448501-26448786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
706-994
               

               
Cow position:
               
chr17:25800924-25800633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 164
               

               
Conread position:
               
708-1006
               

               
Cow position:
               
chr17:35149568-35149260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
27, 49
               

               
Conread position:
               
709-1002
               

               
Cow position:
               
chr17:17044372-17044076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
27, 176
               

               
Conread position:
               
714-904
               

               
Cow position:
               
chr17:28814533-28814333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 177
               

               
Conread position:
               
714-944
               

               
Cow position:
               
chr17:9940649-9940904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
23, 180
               

               
Conread position:
               
714-993
               

               
Cow position:
               
chr17:18818534-18818812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
21, 103
               

               
Conread position:
               
714-994
               

               
Cow position:
               
chr17:20199372-20199102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
715-979
               

               
Cow position:
               
chr17:9950697-9950420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 35
               

               
Conread position:
               
715-993
               

               
Cow position:
               
chr17:32333125-32332841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
20, 30
               

               
Conread position:
               
716-978
               

               
Cow position:
               
chr17:18267223-18267495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
718-1001
               

               
Cow position:
               
chr17:8815160-8815445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
17, 27
               

               
Conread position:
               
720-1006
               

               
Cow position:
               
chr17:29995464-29995171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
722-843
               

               
Cow position:
               
chr17:21604388-21604509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 49
               

               
Conread position:
               
723-999
               

               
Cow position:
               
chr17:28982154-28982433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
12, 162
               

               
Conread position:
               
724-998
               

               
Cow position:
               
chr17:27303980-27303724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
121, 7
               

               
Conread position:
               
725-968
               

               
Cow position:
               
chr17:25584216-25584469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
12, 96
               

               
Conread position:
               
727-979
               

               
Cow position:
               
chr17:22189417-22189667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 29
               

               
Conread position:
               
729-1002
               

               
Cow position:
               
chr17:15354916-15355189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
116, 11
               

               
Conread position:
               
731-906
               

               
Cow position:
               
chr17:34836154-34836334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
34, 151
               

               
Conread position:
               
731-1005
               

               
Cow position:
               
chr17:5013093-5012803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
37, 56
               

               
Conread position:
               
732-1000
               

               
Cow position:
               
chr17:19783043-19783310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
184, 144
               

               
Conread position:
               
734-964
               

               
Cow position:
               
chr17:8823296-8823544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 154
               

               
Conread position:
               
737-986
               

               
Cow position:
               
chr17:37341051-37340788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
38, 158
               

               
Conread position:
               
743-979
               

               
Cow position:
               
chr17:17034946-17035182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
102, 23
               

               
Conread position:
               
751-1004
               

               
Cow position:
               
chr17:9509991-9509733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
22, 42
               

               
Conread position:
               
753-971
               

               
Cow position:
               
chr17:6004811-6005028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
753-1003
               

               
Cow position:
               
chr17:20905091-20904847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 17
               

               
Conread position:
               
755-985
               

               
Cow position:
               
chr17:5288174-5288406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
90, 115
               

               
Conread position:
               
755-993
               

               
Cow position:
               
chr17:9932291-9932061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
90, 19
               

               
Conread position:
               
755-998
               

               
Cow position:
               
chr17:29245452-29245690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
91, 17
               

               
Conread position:
               
755-1004
               

               
Cow position:
               
chr17:21472171-21471924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
131, 89
               

               
Conread position:
               
757-1001
               

               
Cow position:
               
chr17:26562132-26561878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 130
               

               
Conread position:
               
758-897
               

               
Cow position:
               
chr17:12342468-12342327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 12
               

               
Conread position:
               
758-986
               

               
Cow position:
               
chr17:12091810-12091590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 118
               

               
Conread position:
               
758-995
               

               
Cow position:
               
chr17:9935794-9935552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
758-1000
               

               
Cow position:
               
chr17:21466253-21466004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 127
               

               
Conread position:
               
758-1003
               

               
Cow position:
               
chr17:26637848-26637594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
53, 166
               

               
Conread position:
               
759-968
               

               
Cow position:
               
chr17:24862470-24862680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
86, 125
               

               
Conread position:
               
759-992
               

               
Cow position:
               
chr17:25473268-25473029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
86, 123
               

               
Conread position:
               
759-1008
               

               
Cow position:
               
chr17:21788647-21788382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 125
               

               
Conread position:
               
760-971
               

               
Cow position:
               
chr17:11224116-11224338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 120
               

               
Conread position:
               
764-998
               

               
Cow position:
               
chr17:33653673-33653438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
81, 126
               

               
Conread position:
               
767-914
               

               
Cow position:
               
chr17:37430485-37430334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 117
               

               
Conread position:
               
772-907
               

               
Cow position:
               
chr17:5719896-5720035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 112
               

               
Conread position:
               
772-909
               

               
Cow position:
               
chr17:8108329-8108192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
56, 48
               

               
Conread position:
               
772-942
               

               
Cow position:
               
chr17:37129224-37129412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
772-993
               

               
Cow position:
               
chr17:4817553-4817780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 53
               

               
Conread position:
               
772-1006
               

               
Cow position:
               
chr17:18674004-18673774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
131, 27
               

               
Conread position:
               
773-914
               

               
Cow position:
               
chr17:22074472-22074327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
72, 111
               

               
Conread position:
               
773-938
               

               
Cow position:
               
chr17:34836082-34835915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 109
               

               
Conread position:
               
773-979
               

               
Cow position:
               
chr17:43957686-43957897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
66, 109
               

               
Conread position:
               
774-910
               

               
Cow position:
               
chr17:5743264-5743124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
71, 110
               

               
Conread position:
               
774-980
               

               
Cow position:
               
chr17:946384-946593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
69, 111
               

               
Conread position:
               
774-980
               

               
Cow position:
               
chr17:27292430-27292217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
71, 107
               

               
Conread position:
               
775-975
               

               
Cow position:
               
chr17:32143116-32143321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
775-978
               

               
Cow position:
               
chr17:40276768-40276971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
70, 109
               

               
Conread position:
               
775-1006
               

               
Cow position:
               
chr17:7959208-7959440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 110
               

               
Conread position:
               
776-986
               

               
Cow position:
               
chr17:25511274-25511485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
67, 108
               

               
Conread position:
               
776-1003
               

               
Cow position:
               
chr17:20929270-20929504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
69, 109
               

               
Conread position:
               
777-1005
               

               
Cow position:
               
chr17:19544201-19543972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
778-1004
               

               
Cow position:
               
chr17:10508403-10508174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
63, 106
               

               
Conread position:
               
779-993
               

               
Cow position:
               
chr17:42150423-42150637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
66, 108
               

               
Conread position:
               
781-986
               

               
Cow position:
               
chr17:40412617-40412822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 104
               

               
Conread position:
               
792-907
               

               
Cow position:
               
chr17:968929-969047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
53, 45
               

               
Conread position:
               
793-993
               

               
Cow position:
               
chr17:15883717-15883924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
52, 90
               

               
Conread position:
               
793-993
               

               
Cow position:
               
chr17:19898936-19899149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 93
               

               
Conread position:
               
793-995
               

               
Cow position:
               
chr17:10414544-10414747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
52, 88
               

               
Conread position:
               
793-998
               

               
Cow position:
               
chr17:39963923-39964131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 84
               

               
Conread position:
               
793-999
               

               
Cow position:
               
chr17:26225073-26225282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
46, 91
               

               
Conread position:
               
793-1000
               

               
Cow position:
               
chr17:3364635-3364843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
29, 96
               

               
Conread position:
               
793-1006
               

               
Cow position:
               
chr17:5344663-5344885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 91
               

               
Conread position:
               
794-971
               

               
Cow position:
               
chr17:28795936-28795752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 89
               

               
Conread position:
               
794-980
               

               
Cow position:
               
chr17:10825527-10825713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
51, 90
               

               
Conread position:
               
794-998
               

               
Cow position:
               
chr17:31754728-31754516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
51, 41
               

               
Conread position:
               
795-978
               

               
Cow position:
               
chr17:35457768-35457583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
795-986
               

               
Cow position:
               
chr17:20306374-20306576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 87
               

               
Conread position:
               
795-1004
               

               
Cow position:
               
chr17:6786984-6787201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
50, 86
               

               
Conread position:
               
796-992
               

               
Cow position:
               
chr17:10016328-10016527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
49, 67
               

               
Conread position:
               
797-1004
               

               
Cow position:
               
chr17:2729863-2729656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
798-1003
               

               
Cow position:
               
chr17:6761797-6761596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 81
               

               
Conread position:
               
799-968
               

               
Cow position:
               
chr17:28528909-28529080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
799-979
               

               
Cow position:
               
chr17:9078169-9077977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
46, 86
               

               
Conread position:
               
799-1004
               

               
Cow position:
               
chr17:30900363-30900574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 10
               

               
Conread position:
               
799-1006
               

               
Cow position:
               
chr17:20359164-20359384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 84
               

               
Conread position:
               
801-1005
               

               
Cow position:
               
chr17:24111546-24111340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
802-986
               

               
Cow position:
               
chr17:6318048-6317863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 84
               

               
Conread position:
               
802-993
               

               
Cow position:
               
chr17:19471716-19471524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 79
               

               
Conread position:
               
802-999
               

               
Cow position:
               
chr17:25122189-25121993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
802-1000
               

               
Cow position:
               
chr17:11921110-11920903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
43, 81
               

               
Conread position:
               
802-1000
               

               
Cow position:
               
chr17:24895128-24895335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
803-985
               

               
Cow position:
               
chr17:11056104-11055925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
90, 74
               

               
Conread position:
               
804-968
               

               
Cow position:
               
chr17:8137462-8137627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
804-971
               

               
Cow position:
               
chr17:21777783-21777956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 80
               

               
Conread position:
               
804-986
               

               
Cow position:
               
chr17:7711494-7711679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
41, 83
               

               
Conread position:
               
806-990
               

               
Cow position:
               
chr17:12963550-12963370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
9, 71
               

               
Conread position:
               
806-1003
               

               
Cow position:
               
chr17:21718938-21718737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
807-986
               

               
Cow position:
               
chr17:18928878-18928690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
807-1003
               

               
Cow position:
               
chr17:18776127-18775930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
39, 109
               

               
Conread position:
               
809-993
               

               
Cow position:
               
chr17:26183406-26183597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
810-1005
               

               
Cow position:
               
chr17:18708547-18708357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
35, 6
               

               
Conread position:
               
812-987
               

               
Cow position:
               
chr17:21363446-21363627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 72
               

               
Conread position:
               
812-1004
               

               
Cow position:
               
chr17:9260548-9260355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 74
               

               
Conread position:
               
812-1006
               

               
Cow position:
               
chr17:21236587-21236786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
31, 69
               

               
Conread position:
               
813-1006
               

               
Cow position:
               
chr17:3387783-3387981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
814-979
               

               
Cow position:
               
chr17:20836158-20836326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
817-1007
               

               
Cow position:
               
chr17:33155085-33154894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
28, 100
               

               
Conread position:
               
818-967
               

               
Cow position:
               
chr17:7554193-7554043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
819-979
               

               
Cow position:
               
chr17:24898272-24898441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 90
               

               
Conread position:
               
820-1006
               

               
Cow position:
               
chr17:24987278-24987466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 66
               

               
Conread position:
               
825-975
               

               
Cow position:
               
chr17:38736516-38736663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 60
               

               
Conread position:
               
836-1001
               

               
Cow position:
               
chr17:35935253-35935418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
73, 42
               

               
Conread position:
               
838-986
               

               
Cow position:
               
chr17:17822186-17822329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
842-964
               

               
Cow position:
               
chr17:3541809-3541929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
842-986
               

               
Cow position:
               
chr17:8809405-8809265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
842-994
               

               
Cow position:
               
chr17:24612750-24612899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
139, 38
               

               
Conread position:
               
842-996
               

               
Cow position:
               
chr17:25352297-25352461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
842-1000
               

               
Cow position:
               
chr17:14668602-14668762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
843-972
               

               
Cow position:
               
chr17:7864925-7865054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
858-986
               

               
Cow position:
               
chr17:11920915-11920786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 22
               

               
Conread position:
               
859-1005
               

               
Cow position:
               
chr17:4271246-4271099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 14
               
Show alignments to all cow chromosomes.