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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8023F22.3
        

               
Conread position:
               
533-912
               

               
Cow position:
               
chr21:1058899-1059268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
175, 16
               

               
Conread position:
               
536-827
               

               
Cow position:
               
chr21:3381262-3380975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
127, 82
               

               
Conread position:
               
539-918
               

               
Cow position:
               
chr21:18065102-18064720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 83
               

               
Conread position:
               
542-958
               

               
Cow position:
               
chr21:6623971-6624397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
546-938
               

               
Cow position:
               
chr21:10633812-10633421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
547-787
               

               
Cow position:
               
chr21:42190338-42190108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
160, 68
               

               
Conread position:
               
547-886
               

               
Cow position:
               
chr21:39401427-39401759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 9
               

               
Conread position:
               
548-921
               

               
Cow position:
               
chr21:10823385-10823762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
74, 208
               

               
Conread position:
               
549-796
               

               
Cow position:
               
chr21:21480352-21480112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
8, 70
               

               
Conread position:
               
550-820
               

               
Cow position:
               
chr21:12961069-12960804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
157, 58
               

               
Conread position:
               
550-875
               

               
Cow position:
               
chr21:20044940-20044608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
126, 73
               

               
Conread position:
               
550-876
               

               
Cow position:
               
chr21:4998653-4998338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
107, 71
               

               
Conread position:
               
550-899
               

               
Cow position:
               
chr21:1591381-1591726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
550-902
               

               
Cow position:
               
chr21:15610985-15611322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
217, 67
               

               
Conread position:
               
550-914
               

               
Cow position:
               
chr21:38692023-38692390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
100, 72
               

               
Conread position:
               
550-964
               

               
Cow position:
               
chr21:13840155-13840572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
550-981
               

               
Cow position:
               
chr21:41579581-41580016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 62
               

               
Conread position:
               
550-993
               

               
Cow position:
               
chr21:44826050-44825602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
150, 60
               

               
Conread position:
               
550-1008
               

               
Cow position:
               
chr21:12087426-12087865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
128, 11
               

               
Conread position:
               
551-788
               

               
Cow position:
               
chr21:912132-911902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
157, 72
               

               
Conread position:
               
551-821
               

               
Cow position:
               
chr21:7067879-7068149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
64, 86
               

               
Conread position:
               
551-843
               

               
Cow position:
               
chr21:17616490-17616196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
153, 93
               

               
Conread position:
               
551-906
               

               
Cow position:
               
chr21:27624550-27624884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
156, 11
               

               
Conread position:
               
551-972
               

               
Cow position:
               
chr21:3763903-3763499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
156, 63
               

               
Conread position:
               
551-999
               

               
Cow position:
               
chr21:38900608-38901042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
552-742
               

               
Cow position:
               
chr21:42464005-42463816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
102, 66
               

               
Conread position:
               
552-812
               

               
Cow position:
               
chr21:3047520-3047765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
155, 69
               

               
Conread position:
               
552-894
               

               
Cow position:
               
chr21:8235706-8235388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
151, 12
               

               
Conread position:
               
556-816
               

               
Cow position:
               
chr21:20925667-20925411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
151, 65
               

               
Conread position:
               
558-800
               

               
Cow position:
               
chr21:23984442-23984206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
142, 46
               

               
Conread position:
               
558-889
               

               
Cow position:
               
chr21:44754935-44754610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
180, 63
               

               
Conread position:
               
558-899
               

               
Cow position:
               
chr21:23801280-23800949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
149, 71
               

               
Conread position:
               
558-905
               

               
Cow position:
               
chr21:31662302-31662653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
140, 63
               

               
Conread position:
               
558-905
               

               
Cow position:
               
chr21:42348836-42348511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
150, 60
               

               
Conread position:
               
558-938
               

               
Cow position:
               
chr21:8549519-8549901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
149, 65
               

               
Conread position:
               
558-967
               

               
Cow position:
               
chr21:19766696-19767112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
129, 51
               

               
Conread position:
               
558-992
               

               
Cow position:
               
chr21:13889835-13889382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
74, 299
               

               
Conread position:
               
559-999
               

               
Cow position:
               
chr21:957509-957947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 58
               

               
Conread position:
               
560-897
               

               
Cow position:
               
chr21:21223133-21223458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
178, 61
               

               
Conread position:
               
560-899
               

               
Cow position:
               
chr21:4276748-4276424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
168, 57
               

               
Conread position:
               
560-1007
               

               
Cow position:
               
chr21:41974535-41974077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 62
               

               
Conread position:
               
561-746
               

               
Cow position:
               
chr21:45375460-45375644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
146, 48
               

               
Conread position:
               
561-747
               

               
Cow position:
               
chr21:9998876-9998694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
147, 30
               

               
Conread position:
               
561-766
               

               
Cow position:
               
chr21:7132618-7132424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
146, 57
               

               
Conread position:
               
561-798
               

               
Cow position:
               
chr21:31676343-31676575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
561-808
               

               
Cow position:
               
chr21:8985394-8985636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
561-810
               

               
Cow position:
               
chr21:28443533-28443286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
146, 46
               

               
Conread position:
               
561-814
               

               
Cow position:
               
chr21:39450324-39450070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
113, 61
               

               
Conread position:
               
561-816
               

               
Cow position:
               
chr21:47802415-47802167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
561-818
               

               
Cow position:
               
chr21:28993781-28993522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
117, 60
               

               
Conread position:
               
561-821
               

               
Cow position:
               
chr21:32535821-32536074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
146, 49
               

               
Conread position:
               
561-832
               

               
Cow position:
               
chr21:42913901-42913640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
144, 49
               

               
Conread position:
               
561-839
               

               
Cow position:
               
chr21:13409978-13409716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
561-839
               

               
Cow position:
               
chr21:46829423-46829157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
146, 57
               

               
Conread position:
               
561-843
               

               
Cow position:
               
chr21:4905128-4904848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
116, 63
               

               
Conread position:
               
561-843
               

               
Cow position:
               
chr21:13488364-13488646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
146, 57
               

               
Conread position:
               
561-843
               

               
Cow position:
               
chr21:13489487-13489765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
147, 62
               

               
Conread position:
               
561-843
               

               
Cow position:
               
chr21:33729279-33729549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
116, 60
               

               
Conread position:
               
561-843
               

               
Cow position:
               
chr21:36163118-36162840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
116, 60
               

               
Conread position:
               
561-861
               

               
Cow position:
               
chr21:4795070-4795362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
145, 60
               

               
Conread position:
               
561-868
               

               
Cow position:
               
chr21:34391126-34390826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 57
               

               
Conread position:
               
561-868
               

               
Cow position:
               
chr21:43631358-43631071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
247, 62
               

               
Conread position:
               
561-869
               

               
Cow position:
               
chr21:18842393-18842087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
199, 62
               

               
Conread position:
               
561-875
               

               
Cow position:
               
chr21:19363619-19363304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
141, 60
               

               
Conread position:
               
561-877
               

               
Cow position:
               
chr21:41878321-41878627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
147, 25
               

               
Conread position:
               
561-888
               

               
Cow position:
               
chr21:725047-724711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
129, 60
               

               
Conread position:
               
561-888
               

               
Cow position:
               
chr21:2679397-2679716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
141, 57
               

               
Conread position:
               
561-889
               

               
Cow position:
               
chr21:15911245-15911569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
129, 49
               

               
Conread position:
               
561-889
               

               
Cow position:
               
chr21:38120952-38121270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
150, 62
               

               
Conread position:
               
561-895
               

               
Cow position:
               
chr21:18289507-18289833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
147, 57
               

               
Conread position:
               
561-895
               

               
Cow position:
               
chr21:42414258-42413922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 61
               

               
Conread position:
               
561-897
               

               
Cow position:
               
chr21:24887853-24888168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
181, 57
               

               
Conread position:
               
561-897
               

               
Cow position:
               
chr21:33210043-33210365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
146, 57
               

               
Conread position:
               
561-901
               

               
Cow position:
               
chr21:12801902-12801565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
172, 60
               

               
Conread position:
               
561-901
               

               
Cow position:
               
chr21:28190873-28191213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
147, 62
               

               
Conread position:
               
561-904
               

               
Cow position:
               
chr21:10000925-10001259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
147, 31
               

               
Conread position:
               
561-905
               

               
Cow position:
               
chr21:31691323-31691667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
145, 55
               

               
Conread position:
               
561-906
               

               
Cow position:
               
chr21:24607230-24607564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
88, 57
               

               
Conread position:
               
561-908
               

               
Cow position:
               
chr21:33562860-33563191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 15
               

               
Conread position:
               
561-909
               

               
Cow position:
               
chr21:30607243-30606907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 59
               

               
Conread position:
               
561-910
               

               
Cow position:
               
chr21:7582065-7581715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 49
               

               
Conread position:
               
561-910
               

               
Cow position:
               
chr21:23322239-23321888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 69
               

               
Conread position:
               
561-910
               

               
Cow position:
               
chr21:33263695-33264036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
195, 36
               

               
Conread position:
               
561-910
               

               
Cow position:
               
chr21:36297323-36297684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
50, 112
               

               
Conread position:
               
561-910
               

               
Cow position:
               
chr21:41597660-41598001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 54
               

               
Conread position:
               
561-913
               

               
Cow position:
               
chr21:10118398-10118759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
561-913
               

               
Cow position:
               
chr21:13128249-13127906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
174, 49
               

               
Conread position:
               
561-914
               

               
Cow position:
               
chr21:18790711-18790372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 56
               

               
Conread position:
               
561-914
               

               
Cow position:
               
chr21:29484828-29485172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
561-914
               

               
Cow position:
               
chr21:30250364-30250010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
57, 119
               

               
Conread position:
               
561-914
               

               
Cow position:
               
chr21:33350587-33350935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 60
               

               
Conread position:
               
561-923
               

               
Cow position:
               
chr21:24598506-24598862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
146, 56
               

               
Conread position:
               
561-924
               

               
Cow position:
               
chr21:45473912-45473554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
117, 51
               

               
Conread position:
               
561-936
               

               
Cow position:
               
chr21:9990359-9990727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
172, 19
               

               
Conread position:
               
561-938
               

               
Cow position:
               
chr21:21169650-21169275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 60
               

               
Conread position:
               
561-944
               

               
Cow position:
               
chr21:17643128-17642765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 44
               

               
Conread position:
               
561-965
               

               
Cow position:
               
chr21:41198566-41198152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
116, 60
               

               
Conread position:
               
561-966
               

               
Cow position:
               
chr21:3361170-3360770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
561-972
               

               
Cow position:
               
chr21:17193915-17193496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 61
               

               
Conread position:
               
561-972
               

               
Cow position:
               
chr21:29069484-29069071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
144, 60
               

               
Conread position:
               
561-975
               

               
Cow position:
               
chr21:3585514-3585109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 48
               

               
Conread position:
               
561-975
               

               
Cow position:
               
chr21:11645124-11644711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 51
               

               
Conread position:
               
561-982
               

               
Cow position:
               
chr21:36795448-36795886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
561-982
               

               
Cow position:
               
chr21:47764268-47763864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 55
               

               
Conread position:
               
561-986
               

               
Cow position:
               
chr21:6051351-6051771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
561-986
               

               
Cow position:
               
chr21:28211041-28211443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
172, 60
               

               
Conread position:
               
561-986
               

               
Cow position:
               
chr21:33982964-33982548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 51
               

               
Conread position:
               
561-986
               

               
Cow position:
               
chr21:39888899-39888460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
147, 48
               

               
Conread position:
               
561-986
               

               
Cow position:
               
chr21:42500877-42501318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 61
               

               
Conread position:
               
561-987
               

               
Cow position:
               
chr21:643178-643587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
134, 60
               

               
Conread position:
               
561-987
               

               
Cow position:
               
chr21:40589638-40589213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
561-992
               

               
Cow position:
               
chr21:23586721-23587144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
561-993
               

               
Cow position:
               
chr21:10263885-10264308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 57
               

               
Conread position:
               
561-993
               

               
Cow position:
               
chr21:13585215-13584780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 74
               

               
Conread position:
               
561-993
               

               
Cow position:
               
chr21:30592459-30592042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 56
               

               
Conread position:
               
561-994
               

               
Cow position:
               
chr21:33566-34007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 62
               

               
Conread position:
               
561-1000
               

               
Cow position:
               
chr21:13089634-13089192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
561-1000
               

               
Cow position:
               
chr21:30231857-30231416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 61
               

               
Conread position:
               
561-1000
               

               
Cow position:
               
chr21:47760620-47761050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
116, 61
               

               
Conread position:
               
561-1002
               

               
Cow position:
               
chr21:15445234-15444799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 49
               

               
Conread position:
               
561-1002
               

               
Cow position:
               
chr21:17511621-17512052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
175, 36
               

               
Conread position:
               
561-1003
               

               
Cow position:
               
chr21:41155705-41156150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 51
               

               
Conread position:
               
561-1004
               

               
Cow position:
               
chr21:4282023-4281596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 54
               

               
Conread position:
               
561-1004
               

               
Cow position:
               
chr21:20262489-20262066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
140, 51
               

               
Conread position:
               
561-1005
               

               
Cow position:
               
chr21:4399644-4400078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 51
               

               
Conread position:
               
561-1005
               

               
Cow position:
               
chr21:14464421-14464871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 61
               

               
Conread position:
               
561-1005
               

               
Cow position:
               
chr21:22718936-22718498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 60
               

               
Conread position:
               
561-1006
               

               
Cow position:
               
chr21:32297666-32297221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
146, 49
               

               
Conread position:
               
561-1008
               

               
Cow position:
               
chr21:27569316-27568873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 57
               

               
Conread position:
               
562-906
               

               
Cow position:
               
chr21:26648160-26647830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
95, 16
               

               
Conread position:
               
562-907
               

               
Cow position:
               
chr21:24642364-24642699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
562-1006
               

               
Cow position:
               
chr21:13048351-13047905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
562-1006
               

               
Cow position:
               
chr21:24296919-24296481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
283, 55
               

               
Conread position:
               
564-1004
               

               
Cow position:
               
chr21:19083753-19083305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
144, 45
               

               
Conread position:
               
564-1008
               

               
Cow position:
               
chr21:937887-938305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 12
               

               
Conread position:
               
565-821
               

               
Cow position:
               
chr21:4189683-4189938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
143, 58
               

               
Conread position:
               
565-907
               

               
Cow position:
               
chr21:10151643-10151992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
142, 56
               

               
Conread position:
               
565-907
               

               
Cow position:
               
chr21:28989461-28989801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
188, 55
               

               
Conread position:
               
565-993
               

               
Cow position:
               
chr21:9310894-9311329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
143, 44
               

               
Conread position:
               
565-995
               

               
Cow position:
               
chr21:40899185-40899614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
148, 57
               

               
Conread position:
               
565-1002
               

               
Cow position:
               
chr21:40134005-40134424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 57
               

               
Conread position:
               
565-1005
               

               
Cow position:
               
chr21:43240707-43241119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
105, 58
               

               
Conread position:
               
567-901
               

               
Cow position:
               
chr21:28626089-28626418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
140, 57
               

               
Conread position:
               
567-986
               

               
Cow position:
               
chr21:28923968-28924390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 5
               

               
Conread position:
               
569-913
               

               
Cow position:
               
chr21:11359890-11360219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 53
               

               
Conread position:
               
569-992
               

               
Cow position:
               
chr21:27229942-27229534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 52
               

               
Conread position:
               
570-800
               

               
Cow position:
               
chr21:2785926-2785700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
145, 52
               

               
Conread position:
               
570-843
               

               
Cow position:
               
chr21:5636867-5636601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
137, 49
               

               
Conread position:
               
570-878
               

               
Cow position:
               
chr21:5566844-5567145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
197, 51
               

               
Conread position:
               
570-944
               

               
Cow position:
               
chr21:9416096-9416474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 52
               

               
Conread position:
               
570-999
               

               
Cow position:
               
chr21:23606528-23606943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
130, 51
               

               
Conread position:
               
570-1000
               

               
Cow position:
               
chr21:11027504-11027083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
134, 48
               

               
Conread position:
               
570-1005
               

               
Cow position:
               
chr21:9301062-9301506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
142, 53
               

               
Conread position:
               
571-752
               

               
Cow position:
               
chr21:34738453-34738638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
571-758
               

               
Cow position:
               
chr21:9278227-9278415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
97, 39
               

               
Conread position:
               
571-762
               

               
Cow position:
               
chr21:393876-394057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
162, 39
               

               
Conread position:
               
571-789
               

               
Cow position:
               
chr21:27743597-27743814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
103, 12
               

               
Conread position:
               
571-800
               

               
Cow position:
               
chr21:5137635-5137411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
68, 76
               

               
Conread position:
               
571-816
               

               
Cow position:
               
chr21:6764848-6764608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
104, 21
               

               
Conread position:
               
571-827
               

               
Cow position:
               
chr21:3813628-3813379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
107, 46
               

               
Conread position:
               
571-853
               

               
Cow position:
               
chr21:10727135-10727404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
137, 51
               

               
Conread position:
               
571-875
               

               
Cow position:
               
chr21:17174999-17175291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
571-878
               

               
Cow position:
               
chr21:13738422-13738712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
304, 42
               

               
Conread position:
               
571-888
               

               
Cow position:
               
chr21:18828455-18828134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
136, 37
               

               
Conread position:
               
571-889
               

               
Cow position:
               
chr21:33791513-33791213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
99, 46
               

               
Conread position:
               
571-897
               

               
Cow position:
               
chr21:28429304-28429621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
134, 39
               

               
Conread position:
               
571-899
               

               
Cow position:
               
chr21:30990414-30990109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
203, 38
               

               
Conread position:
               
571-900
               

               
Cow position:
               
chr21:44671608-44671924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 50
               

               
Conread position:
               
571-906
               

               
Cow position:
               
chr21:37345247-37344915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 50
               

               
Conread position:
               
571-908
               

               
Cow position:
               
chr21:45921204-45920872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
91, 41
               

               
Conread position:
               
571-910
               

               
Cow position:
               
chr21:18800674-18800344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
237, 50
               

               
Conread position:
               
571-913
               

               
Cow position:
               
chr21:32237152-32237473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
137, 52
               

               
Conread position:
               
571-944
               

               
Cow position:
               
chr21:19258681-19259040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 50
               

               
Conread position:
               
571-971
               

               
Cow position:
               
chr21:8351450-8351043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
137, 43
               

               
Conread position:
               
571-972
               

               
Cow position:
               
chr21:5426798-5427179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 46
               

               
Conread position:
               
571-972
               

               
Cow position:
               
chr21:11740276-11739867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 113
               

               
Conread position:
               
571-972
               

               
Cow position:
               
chr21:46849268-46848881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 52
               

               
Conread position:
               
571-978
               

               
Cow position:
               
chr21:24858166-24858574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 47
               

               
Conread position:
               
571-979
               

               
Cow position:
               
chr21:32339882-32339486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 38
               

               
Conread position:
               
571-980
               

               
Cow position:
               
chr21:10114474-10114072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
129, 50
               

               
Conread position:
               
571-980
               

               
Cow position:
               
chr21:28734057-28733652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
135, 50
               

               
Conread position:
               
571-980
               

               
Cow position:
               
chr21:36762908-36763322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
137, 27
               

               
Conread position:
               
571-982
               

               
Cow position:
               
chr21:23672598-23673007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
571-984
               

               
Cow position:
               
chr21:28244330-28244731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 41
               

               
Conread position:
               
571-986
               

               
Cow position:
               
chr21:39664534-39664132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
113, 46
               

               
Conread position:
               
571-986
               

               
Cow position:
               
chr21:47465266-47464853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 30
               

               
Conread position:
               
571-986
               

               
Cow position:
               
chr21:47861049-47861447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
130, 51
               

               
Conread position:
               
571-987
               

               
Cow position:
               
chr21:641439-641851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
571-991
               

               
Cow position:
               
chr21:14760435-14760826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 47
               

               
Conread position:
               
571-992
               

               
Cow position:
               
chr21:29214294-29213887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
274, 52
               

               
Conread position:
               
571-993
               

               
Cow position:
               
chr21:18568795-18568359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 81
               

               
Conread position:
               
571-996
               

               
Cow position:
               
chr21:39403684-39403251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
134, 51
               

               
Conread position:
               
571-998
               

               
Cow position:
               
chr21:34010536-34010118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 38
               

               
Conread position:
               
571-998
               

               
Cow position:
               
chr21:41590702-41590287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
202, 50
               

               
Conread position:
               
571-1000
               

               
Cow position:
               
chr21:81925-82337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 98
               

               
Conread position:
               
571-1000
               

               
Cow position:
               
chr21:27863665-27863238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
571-1003
               

               
Cow position:
               
chr21:49700181-49699752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 52
               

               
Conread position:
               
571-1004
               

               
Cow position:
               
chr21:27146137-27145702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
571-1005
               

               
Cow position:
               
chr21:22860856-22861280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
571-1006
               

               
Cow position:
               
chr21:10005031-10004595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 50
               

               
Conread position:
               
571-1006
               

               
Cow position:
               
chr21:29002307-29001854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 47
               

               
Conread position:
               
572-841
               

               
Cow position:
               
chr21:43357408-43357139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 51
               

               
Conread position:
               
572-877
               

               
Cow position:
               
chr21:45330752-45330449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 38
               

               
Conread position:
               
572-907
               

               
Cow position:
               
chr21:5392687-5392350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
135, 51
               

               
Conread position:
               
572-986
               

               
Cow position:
               
chr21:12153991-12154391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 42
               

               
Conread position:
               
573-840
               

               
Cow position:
               
chr21:426646-426923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
106, 49
               

               
Conread position:
               
573-900
               

               
Cow position:
               
chr21:25764491-25764815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
189, 50
               

               
Conread position:
               
573-910
               

               
Cow position:
               
chr21:2927350-2927015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
110, 47
               

               
Conread position:
               
573-913
               

               
Cow position:
               
chr21:27341740-27341402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
134, 44
               

               
Conread position:
               
573-920
               

               
Cow position:
               
chr21:28998049-28997712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
118, 49
               

               
Conread position:
               
573-936
               

               
Cow position:
               
chr21:42007603-42007243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 44
               

               
Conread position:
               
573-979
               

               
Cow position:
               
chr21:17183778-17184177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 36
               

               
Conread position:
               
573-982
               

               
Cow position:
               
chr21:20160540-20160940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 37
               

               
Conread position:
               
573-986
               

               
Cow position:
               
chr21:38449595-38449186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
573-1003
               

               
Cow position:
               
chr21:38918071-38918483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
162, 39
               

               
Conread position:
               
573-1005
               

               
Cow position:
               
chr21:27521472-27521059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 39
               

               
Conread position:
               
574-994
               

               
Cow position:
               
chr21:23311090-23310680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
237, 47
               

               
Conread position:
               
574-998
               

               
Cow position:
               
chr21:20152806-20153232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 5
               

               
Conread position:
               
575-986
               

               
Cow position:
               
chr21:45355695-45356081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
132, 47
               

               
Conread position:
               
575-993
               

               
Cow position:
               
chr21:14452096-14452507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
577-783
               

               
Cow position:
               
chr21:18494826-18495029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
130, 44
               

               
Conread position:
               
577-821
               

               
Cow position:
               
chr21:6102399-6102164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
128, 44
               

               
Conread position:
               
577-829
               

               
Cow position:
               
chr21:45439389-45439131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
577-866
               

               
Cow position:
               
chr21:11250726-11251016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
93, 33
               

               
Conread position:
               
577-870
               

               
Cow position:
               
chr21:42540360-42540071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
190, 46
               

               
Conread position:
               
577-897
               

               
Cow position:
               
chr21:9028481-9028793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
128, 33
               

               
Conread position:
               
577-990
               

               
Cow position:
               
chr21:30849079-30848676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
577-997
               

               
Cow position:
               
chr21:41620980-41621406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 36
               

               
Conread position:
               
577-1003
               

               
Cow position:
               
chr21:48234298-48233896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
131, 31
               

               
Conread position:
               
577-1004
               

               
Cow position:
               
chr21:19196306-19195876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
130, 46
               

               
Conread position:
               
577-1004
               

               
Cow position:
               
chr21:23980326-23979899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 37
               

               
Conread position:
               
578-986
               

               
Cow position:
               
chr21:5898536-5898143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 44
               

               
Conread position:
               
578-993
               

               
Cow position:
               
chr21:12462109-12461696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
578-993
               

               
Cow position:
               
chr21:23568075-23568498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 40
               

               
Conread position:
               
579-1006
               

               
Cow position:
               
chr21:37299332-37299747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
182, 31
               

               
Conread position:
               
580-843
               

               
Cow position:
               
chr21:25536857-25537117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
125, 64
               

               
Conread position:
               
580-899
               

               
Cow position:
               
chr21:12723020-12723330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
189, 43
               

               
Conread position:
               
580-986
               

               
Cow position:
               
chr21:29978899-29978498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 42
               

               
Conread position:
               
580-1005
               

               
Cow position:
               
chr21:17875332-17874907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 43
               

               
Conread position:
               
581-841
               

               
Cow position:
               
chr21:24222677-24222420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
126, 41
               

               
Conread position:
               
581-878
               

               
Cow position:
               
chr21:20418825-20418523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
581-897
               

               
Cow position:
               
chr21:18845155-18844834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
126, 27
               

               
Conread position:
               
582-990
               

               
Cow position:
               
chr21:42135758-42135349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 48
               

               
Conread position:
               
583-804
               

               
Cow position:
               
chr21:28617454-28617671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
583-914
               

               
Cow position:
               
chr21:42384372-42384703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 40
               

               
Conread position:
               
584-1004
               

               
Cow position:
               
chr21:15584546-15584143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
585-853
               

               
Cow position:
               
chr21:24765157-24765408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
125, 25
               

               
Conread position:
               
585-914
               

               
Cow position:
               
chr21:10538394-10538061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
22, 61
               

               
Conread position:
               
586-899
               

               
Cow position:
               
chr21:18941963-18941655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
181, 11
               

               
Conread position:
               
588-897
               

               
Cow position:
               
chr21:12301632-12301334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
147, 35
               

               
Conread position:
               
588-986
               

               
Cow position:
               
chr21:31253402-31253795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
591-895
               

               
Cow position:
               
chr21:21077197-21077484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
116, 32
               

               
Conread position:
               
591-1000
               

               
Cow position:
               
chr21:46913-47326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 39
               

               
Conread position:
               
592-972
               

               
Cow position:
               
chr21:15867175-15867553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
23, 31
               

               
Conread position:
               
593-903
               

               
Cow position:
               
chr21:8451771-8452087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
167, 29
               

               
Conread position:
               
593-1000
               

               
Cow position:
               
chr21:30222218-30222619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
118, 30
               

               
Conread position:
               
600-905
               

               
Cow position:
               
chr21:2657694-2657994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
18, 24
               

               
Conread position:
               
601-902
               

               
Cow position:
               
chr21:25629027-25628731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
107, 21
               

               
Conread position:
               
602-1004
               

               
Cow position:
               
chr21:18155692-18155281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
75, 20
               

               
Conread position:
               
606-970
               

               
Cow position:
               
chr21:10410103-10410473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 11
               

               
Conread position:
               
609-1006
               

               
Cow position:
               
chr21:32559471-32559084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
5, 14
               

               
Conread position:
               
612-889
               

               
Cow position:
               
chr21:35354421-35354702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 8
               

               
Conread position:
               
612-982
               

               
Cow position:
               
chr21:23822054-23822414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
612-986
               

               
Cow position:
               
chr21:6713639-6713258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 61
               

               
Conread position:
               
612-1000
               

               
Cow position:
               
chr21:40432340-40432745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
613-817
               

               
Cow position:
               
chr21:34722897-34722695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
94, 9
               

               
Conread position:
               
613-883
               

               
Cow position:
               
chr21:36789686-36789959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
123, 9
               

               
Conread position:
               
613-889
               

               
Cow position:
               
chr21:45915816-45915549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
614-972
               

               
Cow position:
               
chr21:12916536-12916166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
91, 8
               

               
Conread position:
               
614-986
               

               
Cow position:
               
chr21:3236416-3236769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 33
               

               
Conread position:
               
614-1002
               

               
Cow position:
               
chr21:23535603-23535995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 8
               

               
Conread position:
               
618-906
               

               
Cow position:
               
chr21:22465090-22465376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
619-960
               

               
Cow position:
               
chr21:9036191-9036541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
621-985
               

               
Cow position:
               
chr21:30835258-30835631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
622-842
               

               
Cow position:
               
chr21:10601477-10601257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 56
               

               
Conread position:
               
622-902
               

               
Cow position:
               
chr21:395767-396049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
85, 48
               

               
Conread position:
               
622-1004
               

               
Cow position:
               
chr21:33414192-33413813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
623-1000
               

               
Cow position:
               
chr21:6833946-6834330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
85, 140
               

               
Conread position:
               
624-971
               

               
Cow position:
               
chr21:28237815-28237448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
51, 190
               

               
Conread position:
               
625-1006
               

               
Cow position:
               
chr21:16914675-16915061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
626-968
               

               
Cow position:
               
chr21:21686318-21686665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 45
               

               
Conread position:
               
626-986
               

               
Cow position:
               
chr21:8206673-8207023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
74, 46
               

               
Conread position:
               
627-819
               

               
Cow position:
               
chr21:9980062-9979875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
108, 42
               

               
Conread position:
               
627-982
               

               
Cow position:
               
chr21:22121424-22121764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 45
               

               
Conread position:
               
628-867
               

               
Cow position:
               
chr21:30236913-30236686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
77, 8
               

               
Conread position:
               
628-982
               

               
Cow position:
               
chr21:36756506-36756870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
80, 19
               

               
Conread position:
               
629-986
               

               
Cow position:
               
chr21:10673035-10673376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
216, 43
               

               
Conread position:
               
629-1002
               

               
Cow position:
               
chr21:15545466-15545078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
80, 41
               

               
Conread position:
               
629-1008
               

               
Cow position:
               
chr21:33997322-33996964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
106, 37
               

               
Conread position:
               
631-796
               

               
Cow position:
               
chr21:4568191-4568357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
631-812
               

               
Cow position:
               
chr21:13898090-13898276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
74, 48
               

               
Conread position:
               
631-820
               

               
Cow position:
               
chr21:5985412-5985222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 115
               

               
Conread position:
               
631-842
               

               
Cow position:
               
chr21:17008887-17009099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 68
               

               
Conread position:
               
631-843
               

               
Cow position:
               
chr21:18414956-18415171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
631-906
               

               
Cow position:
               
chr21:3818113-3818394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 143
               

               
Conread position:
               
631-907
               

               
Cow position:
               
chr21:15976539-15976819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
631-913
               

               
Cow position:
               
chr21:8527571-8527294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
631-934
               

               
Cow position:
               
chr21:42022196-42022488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
208, 47
               

               
Conread position:
               
631-936
               

               
Cow position:
               
chr21:45330042-45329738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
76, 135
               

               
Conread position:
               
631-971
               

               
Cow position:
               
chr21:34151486-34151827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 197
               

               
Conread position:
               
631-1001
               

               
Cow position:
               
chr21:34653983-34654351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
632-971
               

               
Cow position:
               
chr21:48637853-48637504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
632-1000
               

               
Cow position:
               
chr21:25344778-25345143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
76, 47
               

               
Conread position:
               
632-1006
               

               
Cow position:
               
chr21:45906714-45906335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
633-902
               

               
Cow position:
               
chr21:13365246-13365524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
633-986
               

               
Cow position:
               
chr21:6997846-6998207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 137
               

               
Conread position:
               
633-993
               

               
Cow position:
               
chr21:37706506-37706140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
129, 14
               

               
Conread position:
               
636-982
               

               
Cow position:
               
chr21:22210333-22209981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 43
               

               
Conread position:
               
637-843
               

               
Cow position:
               
chr21:11198237-11198029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 42
               

               
Conread position:
               
637-890
               

               
Cow position:
               
chr21:28955422-28955671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
637-993
               

               
Cow position:
               
chr21:19067441-19067805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
40, 97
               

               
Conread position:
               
637-1004
               

               
Cow position:
               
chr21:30218271-30217934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
641-971
               

               
Cow position:
               
chr21:41107846-41107525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 38
               

               
Conread position:
               
644-974
               

               
Cow position:
               
chr21:16152350-16152694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 172
               

               
Conread position:
               
644-986
               

               
Cow position:
               
chr21:37014484-37014159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
647-1007
               

               
Cow position:
               
chr21:44251913-44251555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
131, 34
               

               
Conread position:
               
648-840
               

               
Cow position:
               
chr21:33360111-33359925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
648-899
               

               
Cow position:
               
chr21:46552183-46551922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
649-907
               

               
Cow position:
               
chr21:26244844-26245101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 23
               

               
Conread position:
               
649-924
               

               
Cow position:
               
chr21:36909858-36910134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
649-978
               

               
Cow position:
               
chr21:42841674-42841327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
87, 49
               

               
Conread position:
               
649-979
               

               
Cow position:
               
chr21:44214048-44214370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
649-979
               

               
Cow position:
               
chr21:45971249-45970920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 121
               

               
Conread position:
               
651-843
               

               
Cow position:
               
chr21:46140967-46141167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
651-900
               

               
Cow position:
               
chr21:45262886-45262630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
52, 21
               

               
Conread position:
               
651-999
               

               
Cow position:
               
chr21:47714081-47713729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 8
               

               
Conread position:
               
651-1007
               

               
Cow position:
               
chr21:47719373-47719017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
652-914
               

               
Cow position:
               
chr21:19673731-19674000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
653-995
               

               
Cow position:
               
chr21:40266049-40266398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 175
               

               
Conread position:
               
653-1001
               

               
Cow position:
               
chr21:1511219-1511570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
655-1006
               

               
Cow position:
               
chr21:30256340-30255969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
80, 227
               

               
Conread position:
               
660-982
               

               
Cow position:
               
chr21:15544283-15543977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
660-993
               

               
Cow position:
               
chr21:41140783-41140443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
665-1004
               

               
Cow position:
               
chr21:44829823-44829473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
38, 223
               

               
Conread position:
               
666-960
               

               
Cow position:
               
chr21:28191307-28191589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
666-1003
               

               
Cow position:
               
chr21:28919584-28919249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
667-986
               

               
Cow position:
               
chr21:5464687-5465013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 138
               

               
Conread position:
               
668-1008
               

               
Cow position:
               
chr21:13656688-13656348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
177, 52
               

               
Conread position:
               
669-821
               

               
Cow position:
               
chr21:22720169-22720325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
670-1008
               

               
Cow position:
               
chr21:22014130-22014479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
31, 221
               

               
Conread position:
               
671-920
               

               
Cow position:
               
chr21:43259167-43259421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
671-986
               

               
Cow position:
               
chr21:11779585-11779272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
37, 67
               

               
Conread position:
               
672-998
               

               
Cow position:
               
chr21:977199-976871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
672-999
               

               
Cow position:
               
chr21:17890248-17890579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
36, 80
               

               
Conread position:
               
672-1004
               

               
Cow position:
               
chr21:47363793-47363436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 219
               

               
Conread position:
               
673-986
               

               
Cow position:
               
chr21:868979-868653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 215
               

               
Conread position:
               
674-959
               

               
Cow position:
               
chr21:7377982-7377684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
26, 214
               

               
Conread position:
               
675-993
               

               
Cow position:
               
chr21:36910688-36911011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
35, 77
               

               
Conread position:
               
677-993
               

               
Cow position:
               
chr21:46599312-46599631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
681-986
               

               
Cow position:
               
chr21:31159360-31159653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
57, 18
               

               
Conread position:
               
682-908
               

               
Cow position:
               
chr21:19513820-19514041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
26, 98
               

               
Conread position:
               
682-991
               

               
Cow position:
               
chr21:29014958-29014646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
26, 144
               

               
Conread position:
               
685-1003
               

               
Cow position:
               
chr21:12339597-12339901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 145
               

               
Conread position:
               
685-1006
               

               
Cow position:
               
chr21:742246-742560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
686-950
               

               
Cow position:
               
chr21:30157847-30157574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 36
               

               
Conread position:
               
686-972
               

               
Cow position:
               
chr21:10657143-10656849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
687-896
               

               
Cow position:
               
chr21:471637-471850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
688-907
               

               
Cow position:
               
chr21:40192341-40192119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
690-1000
               

               
Cow position:
               
chr21:17982939-17983247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 171
               

               
Conread position:
               
691-993
               

               
Cow position:
               
chr21:42209667-42209373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 198
               

               
Conread position:
               
691-993
               

               
Cow position:
               
chr21:46132548-46132865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
150, 23
               

               
Conread position:
               
693-906
               

               
Cow position:
               
chr21:44861145-44860934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
693-910
               

               
Cow position:
               
chr21:734562-734779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
693-986
               

               
Cow position:
               
chr21:13395564-13395847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
697-971
               

               
Cow position:
               
chr21:6317710-6317434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 63
               

               
Conread position:
               
697-985
               

               
Cow position:
               
chr21:20165611-20165904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
701-1000
               

               
Cow position:
               
chr21:28030264-28030559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
34, 126
               

               
Conread position:
               
701-1004
               

               
Cow position:
               
chr21:8426422-8426725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
701-1004
               

               
Cow position:
               
chr21:38720228-38720533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
704-993
               

               
Cow position:
               
chr21:71565-71859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
706-1008
               

               
Cow position:
               
chr21:18318694-18319000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 56
               

               
Conread position:
               
710-1002
               

               
Cow position:
               
chr21:36696103-36695808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
53, 26
               

               
Conread position:
               
714-899
               

               
Cow position:
               
chr21:6387989-6388179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 37
               

               
Conread position:
               
714-977
               

               
Cow position:
               
chr21:32393061-32392805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
714-1004
               

               
Cow position:
               
chr21:13588750-13589048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
7, 108
               

               
Conread position:
               
716-986
               

               
Cow position:
               
chr21:41040921-41041214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
33, 183
               

               
Conread position:
               
716-1003
               

               
Cow position:
               
chr21:44724374-44724093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
716-1008
               

               
Cow position:
               
chr21:7768425-7768714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 173
               

               
Conread position:
               
721-986
               

               
Cow position:
               
chr21:40571456-40571205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
723-994
               

               
Cow position:
               
chr21:12739077-12739363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
13, 160
               

               
Conread position:
               
724-986
               

               
Cow position:
               
chr21:41918247-41917973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
11, 228
               

               
Conread position:
               
724-1003
               

               
Cow position:
               
chr21:8431101-8430815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
31, 7
               

               
Conread position:
               
725-986
               

               
Cow position:
               
chr21:36508241-36508496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
726-1007
               

               
Cow position:
               
chr21:29658281-29658560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
119, 34
               

               
Conread position:
               
734-1006
               

               
Cow position:
               
chr21:39319404-39319125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
13, 151
               

               
Conread position:
               
735-971
               

               
Cow position:
               
chr21:41287784-41287545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
33, 152
               

               
Conread position:
               
735-1007
               

               
Cow position:
               
chr21:31652403-31652672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 14
               

               
Conread position:
               
737-1000
               

               
Cow position:
               
chr21:36682334-36682607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 152
               

               
Conread position:
               
739-993
               

               
Cow position:
               
chr21:41610183-41610452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
744-1001
               

               
Cow position:
               
chr21:28907524-28907267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 139
               

               
Conread position:
               
745-1001
               

               
Cow position:
               
chr21:31279279-31279529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
100, 13
               

               
Conread position:
               
746-964
               

               
Cow position:
               
chr21:40291723-40291505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
748-979
               

               
Cow position:
               
chr21:674710-674927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
749-897
               

               
Cow position:
               
chr21:30119718-30119871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
16, 136
               

               
Conread position:
               
749-1004
               

               
Cow position:
               
chr21:11174262-11174527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
20, 242
               

               
Conread position:
               
749-1004
               

               
Cow position:
               
chr21:42144852-42145098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
754-914
               

               
Cow position:
               
chr21:44592180-44592014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
11, 131
               

               
Conread position:
               
754-1006
               

               
Cow position:
               
chr21:26018409-26018668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
91, 102
               

               
Conread position:
               
757-985
               

               
Cow position:
               
chr21:17252945-17252712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
84, 60
               

               
Conread position:
               
757-1000
               

               
Cow position:
               
chr21:42562664-42562915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
759-993
               

               
Cow position:
               
chr21:20213742-20213498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
84, 123
               

               
Conread position:
               
760-999
               

               
Cow position:
               
chr21:40475534-40475783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
13, 43
               

               
Conread position:
               
760-1004
               

               
Cow position:
               
chr21:27677518-27677764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
43, 121
               

               
Conread position:
               
760-1008
               

               
Cow position:
               
chr21:12310512-12310763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 117
               

               
Conread position:
               
767-997
               

               
Cow position:
               
chr21:13225757-13225992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
13, 115
               

               
Conread position:
               
768-944
               

               
Cow position:
               
chr21:13043974-13043801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
772-907
               

               
Cow position:
               
chr21:30980529-30980391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 111
               

               
Conread position:
               
772-979
               

               
Cow position:
               
chr21:11353113-11353323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
62, 20
               

               
Conread position:
               
772-986
               

               
Cow position:
               
chr21:8240360-8240578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 40
               

               
Conread position:
               
772-986
               

               
Cow position:
               
chr21:9905801-9905596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
67, 108
               

               
Conread position:
               
772-998
               

               
Cow position:
               
chr21:25014978-25014761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
210, 90
               

               
Conread position:
               
772-1003
               

               
Cow position:
               
chr21:30938624-30938383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
40, 115
               

               
Conread position:
               
773-949
               

               
Cow position:
               
chr21:6736140-6735964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
68, 109
               

               
Conread position:
               
774-916
               

               
Cow position:
               
chr21:14228230-14228082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 110
               

               
Conread position:
               
774-994
               

               
Cow position:
               
chr21:24797707-24797929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
55, 108
               

               
Conread position:
               
775-999
               

               
Cow position:
               
chr21:37928700-37928928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
68, 107
               

               
Conread position:
               
775-1000
               

               
Cow position:
               
chr21:20163759-20163994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
63, 109
               

               
Conread position:
               
775-1002
               

               
Cow position:
               
chr21:39393799-39394032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
70, 110
               

               
Conread position:
               
776-968
               

               
Cow position:
               
chr21:7066329-7066137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
71, 47
               

               
Conread position:
               
776-982
               

               
Cow position:
               
chr21:24875404-24875614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
45, 112
               

               
Conread position:
               
776-990
               

               
Cow position:
               
chr21:2537087-2536866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
67, 105
               

               
Conread position:
               
776-999
               

               
Cow position:
               
chr21:30145576-30145354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
67, 91
               

               
Conread position:
               
776-1006
               

               
Cow position:
               
chr21:40820801-40820565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
69, 107
               

               
Conread position:
               
778-978
               

               
Cow position:
               
chr21:26735463-26735655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
778-1000
               

               
Cow position:
               
chr21:31659092-31658877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 7
               

               
Conread position:
               
779-994
               

               
Cow position:
               
chr21:25012137-25012349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 94
               

               
Conread position:
               
785-944
               

               
Cow position:
               
chr21:40059089-40059249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
23, 101
               

               
Conread position:
               
785-997
               

               
Cow position:
               
chr21:48482467-48482257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
785-1006
               

               
Cow position:
               
chr21:20174379-20174599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 100
               

               
Conread position:
               
785-1007
               

               
Cow position:
               
chr21:8713899-8713674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 98
               

               
Conread position:
               
792-1007
               

               
Cow position:
               
chr21:2785418-2785216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 33
               

               
Conread position:
               
793-979
               

               
Cow position:
               
chr21:30657939-30658120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
48, 92
               

               
Conread position:
               
793-980
               

               
Cow position:
               
chr21:42017534-42017340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
52, 89
               

               
Conread position:
               
793-1006
               

               
Cow position:
               
chr21:26828902-26828688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
51, 32
               

               
Conread position:
               
793-1006
               

               
Cow position:
               
chr21:42189688-42189475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
35, 91
               

               
Conread position:
               
793-1007
               

               
Cow position:
               
chr21:11743435-11743206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
50, 88
               

               
Conread position:
               
793-1008
               

               
Cow position:
               
chr21:38482452-38482669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
794-1003
               

               
Cow position:
               
chr21:12348835-12349052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
51, 89
               

               
Conread position:
               
794-1004
               

               
Cow position:
               
chr21:11006700-11006484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
51, 5
               

               
Conread position:
               
794-1006
               

               
Cow position:
               
chr21:15869760-15869971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
49, 87
               

               
Conread position:
               
795-955
               

               
Cow position:
               
chr21:9346493-9346661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
48, 89
               

               
Conread position:
               
795-979
               

               
Cow position:
               
chr21:4108846-4109036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 87
               

               
Conread position:
               
795-979
               

               
Cow position:
               
chr21:30977185-30977009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
795-986
               

               
Cow position:
               
chr21:8986093-8986292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
795-986
               

               
Cow position:
               
chr21:29418643-29418839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
50, 17
               

               
Conread position:
               
795-993
               

               
Cow position:
               
chr21:745246-745441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 68
               

               
Conread position:
               
795-994
               

               
Cow position:
               
chr21:5214419-5214630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
50, 90
               

               
Conread position:
               
796-997
               

               
Cow position:
               
chr21:18783397-18783189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 131
               

               
Conread position:
               
796-1000
               

               
Cow position:
               
chr21:34737238-34737440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
119, 48
               

               
Conread position:
               
799-972
               

               
Cow position:
               
chr21:24350927-24351103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
800-1004
               

               
Cow position:
               
chr21:27744100-27744315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
5, 86
               

               
Conread position:
               
800-1005
               

               
Cow position:
               
chr21:36121303-36121516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
45, 84
               

               
Conread position:
               
803-982
               

               
Cow position:
               
chr21:30970014-30970197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
803-1004
               

               
Cow position:
               
chr21:18449832-18450040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 81
               

               
Conread position:
               
803-1005
               

               
Cow position:
               
chr21:15305220-15305013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 80
               

               
Conread position:
               
804-999
               

               
Cow position:
               
chr21:41737988-41738188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
41, 80
               

               
Conread position:
               
804-1008
               

               
Cow position:
               
chr21:24757021-24757226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
806-1005
               

               
Cow position:
               
chr21:45376033-45376231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
26, 76
               

               
Conread position:
               
807-978
               

               
Cow position:
               
chr21:40930392-40930218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
808-1002
               

               
Cow position:
               
chr21:32272004-32272212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
812-985
               

               
Cow position:
               
chr21:12473968-12473797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
812-986
               

               
Cow position:
               
chr21:27567982-27568161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
812-1003
               

               
Cow position:
               
chr21:37495858-37495658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
32, 75
               

               
Conread position:
               
813-986
               

               
Cow position:
               
chr21:8506457-8506279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
813-986
               

               
Cow position:
               
chr21:8509345-8509167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
814-972
               

               
Cow position:
               
chr21:6291836-6292001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
32, 73
               

               
Conread position:
               
814-1005
               

               
Cow position:
               
chr21:42454951-42455140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
814-1006
               

               
Cow position:
               
chr21:29011880-29011690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
815-985
               

               
Cow position:
               
chr21:18495314-18495480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
819-1005
               

               
Cow position:
               
chr21:40846608-40846793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
61, 97
               

               
Conread position:
               
827-987
               

               
Cow position:
               
chr21:43655805-43655969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
834-966
               

               
Cow position:
               
chr21:7424899-7424767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
82, 46
               

               
Conread position:
               
834-986
               

               
Cow position:
               
chr21:21158926-21159069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
836-1006
               

               
Cow position:
               
chr21:30368193-30368363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
149, 44
               

               
Conread position:
               
840-971
               

               
Cow position:
               
chr21:31258587-31258720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
841-986
               

               
Cow position:
               
chr21:6041906-6042055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
842-991
               

               
Cow position:
               
chr21:16120038-16119891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
842-995
               

               
Cow position:
               
chr21:48242933-48242773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
66, 38
               

               
Conread position:
               
842-1000
               

               
Cow position:
               
chr21:45537308-45537470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
842-1004
               

               
Cow position:
               
chr21:42341815-42341658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
157, 37
               

               
Conread position:
               
842-1007
               

               
Cow position:
               
chr21:46609881-46609718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
851-1006
               

               
Cow position:
               
chr21:30359215-30359061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
134, 27
               

               
Conread position:
               
859-1000
               

               
Cow position:
               
chr21:5488889-5489031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
45, 21
               
Show alignments to all cow chromosomes.