• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8023F22.3
        

               
Conread position:
               
517-1008
               

               
Cow position:
               
chr29:8669090-8669578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 110
               

               
Conread position:
               
544-965
               

               
Cow position:
               
chr29:23844592-23845020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
13, 80
               

               
Conread position:
               
547-843
               

               
Cow position:
               
chr29:14615494-14615210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
125, 63
               

               
Conread position:
               
547-914
               

               
Cow position:
               
chr29:40299246-40298892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 18
               

               
Conread position:
               
548-1005
               

               
Cow position:
               
chr29:14501356-14501814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
14, 76
               

               
Conread position:
               
549-1003
               

               
Cow position:
               
chr29:40117334-40117779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 74
               

               
Conread position:
               
550-807
               

               
Cow position:
               
chr29:32767751-32767515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
157, 11
               

               
Conread position:
               
550-843
               

               
Cow position:
               
chr29:24119968-24119688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
119, 71
               

               
Conread position:
               
550-885
               

               
Cow position:
               
chr29:2984653-2984989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
123, 71
               

               
Conread position:
               
550-889
               

               
Cow position:
               
chr29:15940869-15940523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
550-897
               

               
Cow position:
               
chr29:18072699-18073050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
130, 11
               

               
Conread position:
               
550-986
               

               
Cow position:
               
chr29:4480407-4479966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
155, 68
               

               
Conread position:
               
552-842
               

               
Cow position:
               
chr29:17131837-17131567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
552-993
               

               
Cow position:
               
chr29:5892620-5893054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
207, 24
               

               
Conread position:
               
556-906
               

               
Cow position:
               
chr29:24604376-24604016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
161, 65
               

               
Conread position:
               
556-975
               

               
Cow position:
               
chr29:22895492-22895898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
558-843
               

               
Cow position:
               
chr29:28883857-28884134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
150, 58
               

               
Conread position:
               
558-899
               

               
Cow position:
               
chr29:4367497-4367840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
135, 63
               

               
Conread position:
               
558-899
               

               
Cow position:
               
chr29:37961201-37960862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
143, 65
               

               
Conread position:
               
560-829
               

               
Cow position:
               
chr29:37785400-37785133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
111, 61
               

               
Conread position:
               
560-895
               

               
Cow position:
               
chr29:463875-463543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
175, 62
               

               
Conread position:
               
560-968
               

               
Cow position:
               
chr29:4520114-4520515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 63
               

               
Conread position:
               
560-993
               

               
Cow position:
               
chr29:7956205-7955780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
112, 50
               

               
Conread position:
               
560-993
               

               
Cow position:
               
chr29:10838729-10839148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
145, 63
               

               
Conread position:
               
560-1000
               

               
Cow position:
               
chr29:32963333-32963737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
148, 63
               

               
Conread position:
               
561-756
               

               
Cow position:
               
chr29:8164081-8163891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
127, 63
               

               
Conread position:
               
561-797
               

               
Cow position:
               
chr29:26734813-26735036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
143, 51
               

               
Conread position:
               
561-806
               

               
Cow position:
               
chr29:42886160-42886407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
101, 53
               

               
Conread position:
               
561-808
               

               
Cow position:
               
chr29:35738490-35738254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
561-817
               

               
Cow position:
               
chr29:9686221-9685980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
146, 47
               

               
Conread position:
               
561-818
               

               
Cow position:
               
chr29:39642956-39643204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
144, 54
               

               
Conread position:
               
561-821
               

               
Cow position:
               
chr29:12004985-12004731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
176, 84
               

               
Conread position:
               
561-836
               

               
Cow position:
               
chr29:3502336-3502617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
60, 140
               

               
Conread position:
               
561-843
               

               
Cow position:
               
chr29:18735863-18735586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
116, 60
               

               
Conread position:
               
561-843
               

               
Cow position:
               
chr29:24103769-24103488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
146, 49
               

               
Conread position:
               
561-843
               

               
Cow position:
               
chr29:29974821-29975091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
146, 27
               

               
Conread position:
               
561-843
               

               
Cow position:
               
chr29:36183055-36183334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
149, 30
               

               
Conread position:
               
561-870
               

               
Cow position:
               
chr29:41747220-41747528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
146, 75
               

               
Conread position:
               
561-874
               

               
Cow position:
               
chr29:94769-94480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
146, 62
               

               
Conread position:
               
561-878
               

               
Cow position:
               
chr29:26263631-26263929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
208, 32
               

               
Conread position:
               
561-883
               

               
Cow position:
               
chr29:23984183-23983858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
146, 57
               

               
Conread position:
               
561-886
               

               
Cow position:
               
chr29:9139188-9139517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
114, 59
               

               
Conread position:
               
561-887
               

               
Cow position:
               
chr29:26615945-26615615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
146, 49
               

               
Conread position:
               
561-897
               

               
Cow position:
               
chr29:13553912-13554248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
139, 60
               

               
Conread position:
               
561-897
               

               
Cow position:
               
chr29:20903508-20903179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
147, 49
               

               
Conread position:
               
561-899
               

               
Cow position:
               
chr29:356106-356435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
89, 60
               

               
Conread position:
               
561-902
               

               
Cow position:
               
chr29:16195632-16195956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
284, 56
               

               
Conread position:
               
561-904
               

               
Cow position:
               
chr29:37599425-37599102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 60
               

               
Conread position:
               
561-906
               

               
Cow position:
               
chr29:8926679-8926341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
202, 53
               

               
Conread position:
               
561-907
               

               
Cow position:
               
chr29:6286378-6286040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 62
               

               
Conread position:
               
561-907
               

               
Cow position:
               
chr29:11704902-11705234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 60
               

               
Conread position:
               
561-907
               

               
Cow position:
               
chr29:19338759-19339122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
113, 57
               

               
Conread position:
               
561-910
               

               
Cow position:
               
chr29:25333674-25333337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
146, 46
               

               
Conread position:
               
561-910
               

               
Cow position:
               
chr29:28166438-28166098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 48
               

               
Conread position:
               
561-910
               

               
Cow position:
               
chr29:32290382-32290736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
561-914
               

               
Cow position:
               
chr29:6844850-6844504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 55
               

               
Conread position:
               
561-915
               

               
Cow position:
               
chr29:40166022-40166378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
91, 42
               

               
Conread position:
               
561-918
               

               
Cow position:
               
chr29:707165-706822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
113, 16
               

               
Conread position:
               
561-927
               

               
Cow position:
               
chr29:25088533-25088884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
135, 49
               

               
Conread position:
               
561-966
               

               
Cow position:
               
chr29:19254043-19253648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
116, 60
               

               
Conread position:
               
561-968
               

               
Cow position:
               
chr29:25474687-25475116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
61, 328
               

               
Conread position:
               
561-971
               

               
Cow position:
               
chr29:36586358-36586755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 57
               

               
Conread position:
               
561-972
               

               
Cow position:
               
chr29:20933485-20933902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
116, 60
               

               
Conread position:
               
561-979
               

               
Cow position:
               
chr29:28195737-28195339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
561-979
               

               
Cow position:
               
chr29:36530643-36531060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 57
               

               
Conread position:
               
561-982
               

               
Cow position:
               
chr29:21443564-21443144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 48
               

               
Conread position:
               
561-986
               

               
Cow position:
               
chr29:25737636-25737219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
143, 60
               

               
Conread position:
               
561-987
               

               
Cow position:
               
chr29:2744492-2744068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
561-987
               

               
Cow position:
               
chr29:10653127-10653524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
561-993
               

               
Cow position:
               
chr29:24624027-24624449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 62
               

               
Conread position:
               
561-999
               

               
Cow position:
               
chr29:22162471-22162049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
561-1000
               

               
Cow position:
               
chr29:3711166-3711589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 60
               

               
Conread position:
               
561-1000
               

               
Cow position:
               
chr29:5062911-5063360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
59, 191
               

               
Conread position:
               
561-1000
               

               
Cow position:
               
chr29:17109751-17110166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
147, 62
               

               
Conread position:
               
561-1002
               

               
Cow position:
               
chr29:1325217-1325664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 62
               

               
Conread position:
               
561-1004
               

               
Cow position:
               
chr29:31928759-31929205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
561-1006
               

               
Cow position:
               
chr29:18878721-18878260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 62
               

               
Conread position:
               
561-1006
               

               
Cow position:
               
chr29:20674025-20673586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
114, 60
               

               
Conread position:
               
561-1006
               

               
Cow position:
               
chr29:21196871-21196433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 62
               

               
Conread position:
               
561-1007
               

               
Cow position:
               
chr29:19949089-19949528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
175, 61
               

               
Conread position:
               
561-1008
               

               
Cow position:
               
chr29:4120625-4121077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 53
               

               
Conread position:
               
561-1008
               

               
Cow position:
               
chr29:12679934-12680381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 57
               

               
Conread position:
               
561-1008
               

               
Cow position:
               
chr29:20626356-20626787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
144, 50
               

               
Conread position:
               
561-1008
               

               
Cow position:
               
chr29:23874239-23874683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 78
               

               
Conread position:
               
562-788
               

               
Cow position:
               
chr29:35281281-35281496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
145, 50
               

               
Conread position:
               
562-897
               

               
Cow position:
               
chr29:13372444-13372774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
145, 35
               

               
Conread position:
               
562-898
               

               
Cow position:
               
chr29:7408108-7407792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
176, 56
               

               
Conread position:
               
562-902
               

               
Cow position:
               
chr29:6217766-6217429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
146, 37
               

               
Conread position:
               
562-920
               

               
Cow position:
               
chr29:40852713-40853064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
283, 61
               

               
Conread position:
               
563-1008
               

               
Cow position:
               
chr29:34297783-34297350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 58
               

               
Conread position:
               
564-1004
               

               
Cow position:
               
chr29:16657468-16657908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 30
               

               
Conread position:
               
565-940
               

               
Cow position:
               
chr29:109493-109835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
565-1000
               

               
Cow position:
               
chr29:35501865-35501449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 56
               

               
Conread position:
               
565-1004
               

               
Cow position:
               
chr29:3584341-3583897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
61, 226
               

               
Conread position:
               
565-1006
               

               
Cow position:
               
chr29:16609522-16609971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 17
               

               
Conread position:
               
570-864
               

               
Cow position:
               
chr29:17668284-17668566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
183, 48
               

               
Conread position:
               
570-975
               

               
Cow position:
               
chr29:2263237-2262791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
62, 119
               

               
Conread position:
               
570-1000
               

               
Cow position:
               
chr29:24035627-24035197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
570-1006
               

               
Cow position:
               
chr29:30440714-30441158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 43
               

               
Conread position:
               
570-1008
               

               
Cow position:
               
chr29:31489108-31489544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 43
               

               
Conread position:
               
571-696
               

               
Cow position:
               
chr29:22720917-22721036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
571-768
               

               
Cow position:
               
chr29:21236906-21237093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
132, 33
               

               
Conread position:
               
571-799
               

               
Cow position:
               
chr29:16756844-16757064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
137, 47
               

               
Conread position:
               
571-815
               

               
Cow position:
               
chr29:2532851-2533084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
164, 50
               

               
Conread position:
               
571-821
               

               
Cow position:
               
chr29:29558652-29558402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
41, 106
               

               
Conread position:
               
571-831
               

               
Cow position:
               
chr29:14484756-14484496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
136, 51
               

               
Conread position:
               
571-843
               

               
Cow position:
               
chr29:3704414-3704145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
106, 50
               

               
Conread position:
               
571-864
               

               
Cow position:
               
chr29:17315-17033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
192, 29
               

               
Conread position:
               
571-874
               

               
Cow position:
               
chr29:26330003-26330287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
164, 41
               

               
Conread position:
               
571-877
               

               
Cow position:
               
chr29:32521658-32521962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
142, 50
               

               
Conread position:
               
571-884
               

               
Cow position:
               
chr29:28194803-28194489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
137, 36
               

               
Conread position:
               
571-885
               

               
Cow position:
               
chr29:28446470-28446157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
134, 47
               

               
Conread position:
               
571-885
               

               
Cow position:
               
chr29:28868422-28868742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
136, 41
               

               
Conread position:
               
571-894
               

               
Cow position:
               
chr29:1229398-1229715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
196, 32
               

               
Conread position:
               
571-897
               

               
Cow position:
               
chr29:17607206-17607527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
195, 47
               

               
Conread position:
               
571-905
               

               
Cow position:
               
chr29:11787583-11787914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
127, 17
               

               
Conread position:
               
571-906
               

               
Cow position:
               
chr29:39567477-39567802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
137, 53
               

               
Conread position:
               
571-910
               

               
Cow position:
               
chr29:36216907-36217236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
134, 50
               

               
Conread position:
               
571-914
               

               
Cow position:
               
chr29:40096746-40097090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 50
               

               
Conread position:
               
571-935
               

               
Cow position:
               
chr29:7966036-7966395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
106, 11
               

               
Conread position:
               
571-950
               

               
Cow position:
               
chr29:87232-86839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 51
               

               
Conread position:
               
571-965
               

               
Cow position:
               
chr29:38581757-38582150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 51
               

               
Conread position:
               
571-975
               

               
Cow position:
               
chr29:11562404-11562816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
136, 47
               

               
Conread position:
               
571-978
               

               
Cow position:
               
chr29:28775665-28775272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
137, 51
               

               
Conread position:
               
571-979
               

               
Cow position:
               
chr29:38580765-38581186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 45
               

               
Conread position:
               
571-981
               

               
Cow position:
               
chr29:24952474-24952883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 37
               

               
Conread position:
               
571-986
               

               
Cow position:
               
chr29:2644518-2644120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 27
               

               
Conread position:
               
571-986
               

               
Cow position:
               
chr29:26778674-26779077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
181, 50
               

               
Conread position:
               
571-998
               

               
Cow position:
               
chr29:44378629-44378194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 52
               

               
Conread position:
               
571-1000
               

               
Cow position:
               
chr29:35677755-35677327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 52
               

               
Conread position:
               
571-1001
               

               
Cow position:
               
chr29:17222198-17222628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 38
               

               
Conread position:
               
571-1005
               

               
Cow position:
               
chr29:11915606-11916042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
571-1005
               

               
Cow position:
               
chr29:34744827-34744413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 39
               

               
Conread position:
               
571-1006
               

               
Cow position:
               
chr29:3237568-3237128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
104, 50
               

               
Conread position:
               
571-1006
               

               
Cow position:
               
chr29:4625203-4624771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
571-1006
               

               
Cow position:
               
chr29:6337452-6337871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 50
               

               
Conread position:
               
571-1006
               

               
Cow position:
               
chr29:41530639-41531070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 52
               

               
Conread position:
               
571-1007
               

               
Cow position:
               
chr29:22068957-22068523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
110, 32
               

               
Conread position:
               
572-979
               

               
Cow position:
               
chr29:40891911-40891513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 50
               

               
Conread position:
               
572-980
               

               
Cow position:
               
chr29:26017723-26017305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 49
               

               
Conread position:
               
572-998
               

               
Cow position:
               
chr29:26334599-26334178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
160, 40
               

               
Conread position:
               
572-1005
               

               
Cow position:
               
chr29:27009209-27009648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
159, 46
               

               
Conread position:
               
572-1006
               

               
Cow position:
               
chr29:1933766-1933350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
104, 51
               

               
Conread position:
               
573-897
               

               
Cow position:
               
chr29:650066-650385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
134, 48
               

               
Conread position:
               
573-916
               

               
Cow position:
               
chr29:26654249-26653913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
135, 49
               

               
Conread position:
               
573-975
               

               
Cow position:
               
chr29:22714936-22714520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
139, 57
               

               
Conread position:
               
573-986
               

               
Cow position:
               
chr29:19762064-19762464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
200, 50
               

               
Conread position:
               
573-993
               

               
Cow position:
               
chr29:9709490-9709902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 30
               

               
Conread position:
               
573-996
               

               
Cow position:
               
chr29:23697770-23698183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 50
               

               
Conread position:
               
573-1008
               

               
Cow position:
               
chr29:21933321-21932898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
104, 49
               

               
Conread position:
               
573-1008
               

               
Cow position:
               
chr29:25267907-25268358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
134, 40
               

               
Conread position:
               
574-900
               

               
Cow position:
               
chr29:10153997-10153682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
127, 46
               

               
Conread position:
               
574-960
               

               
Cow position:
               
chr29:465608-465223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
103, 47
               

               
Conread position:
               
574-979
               

               
Cow position:
               
chr29:22778389-22777987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 48
               

               
Conread position:
               
577-822
               

               
Cow position:
               
chr29:7666235-7666000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
92, 35
               

               
Conread position:
               
577-843
               

               
Cow position:
               
chr29:2071773-2071518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
131, 39
               

               
Conread position:
               
577-914
               

               
Cow position:
               
chr29:22175486-22175810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 37
               

               
Conread position:
               
577-993
               

               
Cow position:
               
chr29:22690015-22690433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
119, 46
               

               
Conread position:
               
578-875
               

               
Cow position:
               
chr29:41364906-41365199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 36
               

               
Conread position:
               
578-1006
               

               
Cow position:
               
chr29:1022086-1022517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
579-986
               

               
Cow position:
               
chr29:26259273-26259677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
129, 18
               

               
Conread position:
               
580-896
               

               
Cow position:
               
chr29:17409129-17409445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
96, 42
               

               
Conread position:
               
580-910
               

               
Cow position:
               
chr29:39329798-39329479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
128, 13
               

               
Conread position:
               
581-882
               

               
Cow position:
               
chr29:26985024-26985323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
131, 42
               

               
Conread position:
               
581-914
               

               
Cow position:
               
chr29:750107-749781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
93, 42
               

               
Conread position:
               
581-962
               

               
Cow position:
               
chr29:29056980-29057353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 31
               

               
Conread position:
               
581-979
               

               
Cow position:
               
chr29:7041039-7040674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
322, 40
               

               
Conread position:
               
581-986
               

               
Cow position:
               
chr29:11433922-11434313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 41
               

               
Conread position:
               
582-843
               

               
Cow position:
               
chr29:3100461-3100214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
582-1004
               

               
Cow position:
               
chr29:10818636-10818243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
125, 41
               

               
Conread position:
               
584-897
               

               
Cow position:
               
chr29:6014904-6015237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
38, 316
               

               
Conread position:
               
585-979
               

               
Cow position:
               
chr29:28979676-28979322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 27
               

               
Conread position:
               
589-903
               

               
Cow position:
               
chr29:5186691-5186376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
120, 34
               

               
Conread position:
               
589-915
               

               
Cow position:
               
chr29:11054062-11053731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
591-914
               

               
Cow position:
               
chr29:32211250-32210943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
116, 32
               

               
Conread position:
               
591-979
               

               
Cow position:
               
chr29:26275423-26275795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
137, 32
               

               
Conread position:
               
595-806
               

               
Cow position:
               
chr29:24345640-24345432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
112, 24
               

               
Conread position:
               
595-977
               

               
Cow position:
               
chr29:4334532-4334911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 75
               

               
Conread position:
               
596-998
               

               
Cow position:
               
chr29:25091923-25092319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
106, 27
               

               
Conread position:
               
598-843
               

               
Cow position:
               
chr29:17301341-17301587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
599-967
               

               
Cow position:
               
chr29:31943686-31944050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
611-952
               

               
Cow position:
               
chr29:45005801-45005458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
150, 11
               

               
Conread position:
               
612-815
               

               
Cow position:
               
chr29:2522396-2522590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
612-906
               

               
Cow position:
               
chr29:29512318-29512021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
96, 60
               

               
Conread position:
               
613-869
               

               
Cow position:
               
chr29:44682273-44682019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
614-993
               

               
Cow position:
               
chr29:22029115-22028751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
181, 58
               

               
Conread position:
               
616-1003
               

               
Cow position:
               
chr29:16309572-16309939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
92, 7
               

               
Conread position:
               
617-986
               

               
Cow position:
               
chr29:6925842-6926182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
91, 27
               

               
Conread position:
               
619-808
               

               
Cow position:
               
chr29:25432232-25432417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
171, 50
               

               
Conread position:
               
621-1001
               

               
Cow position:
               
chr29:35405963-35405577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
84, 262
               

               
Conread position:
               
622-902
               

               
Cow position:
               
chr29:9912004-9912290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
86, 48
               

               
Conread position:
               
622-910
               

               
Cow position:
               
chr29:24252070-24252361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
85, 48
               

               
Conread position:
               
622-952
               

               
Cow position:
               
chr29:19428490-19428823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 57
               

               
Conread position:
               
622-979
               

               
Cow position:
               
chr29:5409315-5408948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
59, 140
               

               
Conread position:
               
622-986
               

               
Cow position:
               
chr29:4085151-4085497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
113, 132
               

               
Conread position:
               
622-993
               

               
Cow position:
               
chr29:39111483-39111116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 50
               

               
Conread position:
               
622-1006
               

               
Cow position:
               
chr29:34773902-34773528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 50
               

               
Conread position:
               
623-1001
               

               
Cow position:
               
chr29:12025638-12025264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 47
               

               
Conread position:
               
624-910
               

               
Cow position:
               
chr29:10156468-10156182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
624-979
               

               
Cow position:
               
chr29:31674464-31674825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
84, 48
               

               
Conread position:
               
626-912
               

               
Cow position:
               
chr29:6293640-6293353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
80, 132
               

               
Conread position:
               
626-1006
               

               
Cow position:
               
chr29:25814999-25814612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
54, 78
               

               
Conread position:
               
626-1008
               

               
Cow position:
               
chr29:32799876-32799483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 170
               

               
Conread position:
               
629-968
               

               
Cow position:
               
chr29:12784118-12783772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 41
               

               
Conread position:
               
631-896
               

               
Cow position:
               
chr29:26416201-26416460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
122, 37
               

               
Conread position:
               
631-914
               

               
Cow position:
               
chr29:23244039-23243750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
631-952
               

               
Cow position:
               
chr29:13639529-13639197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 48
               

               
Conread position:
               
631-986
               

               
Cow position:
               
chr29:18021839-18021501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 51
               

               
Conread position:
               
631-1003
               

               
Cow position:
               
chr29:35291931-35292302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 41
               

               
Conread position:
               
631-1003
               

               
Cow position:
               
chr29:36210003-36210367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
631-1005
               

               
Cow position:
               
chr29:29769510-29769135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
631-1008
               

               
Cow position:
               
chr29:27668812-27668436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
107, 17
               

               
Conread position:
               
632-952
               

               
Cow position:
               
chr29:12900709-12900383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 80
               

               
Conread position:
               
632-1000
               

               
Cow position:
               
chr29:24292712-24293082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
632-1001
               

               
Cow position:
               
chr29:2055902-2056275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
632-1001
               

               
Cow position:
               
chr29:34359960-34359608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
171, 40
               

               
Conread position:
               
633-766
               

               
Cow position:
               
chr29:3395949-3396082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
633-903
               

               
Cow position:
               
chr29:43251323-43251048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
78, 8
               

               
Conread position:
               
633-910
               

               
Cow position:
               
chr29:11646940-11647218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
102, 10
               

               
Conread position:
               
633-914
               

               
Cow position:
               
chr29:40960005-40959720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
75, 39
               

               
Conread position:
               
633-951
               

               
Cow position:
               
chr29:45589751-45589434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
37, 231
               

               
Conread position:
               
633-997
               

               
Cow position:
               
chr29:17296974-17297350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 253
               

               
Conread position:
               
633-1002
               

               
Cow position:
               
chr29:17154608-17154979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
17, 39
               

               
Conread position:
               
633-1004
               

               
Cow position:
               
chr29:34745819-34745442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
633-1004
               

               
Cow position:
               
chr29:37618149-37618526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
633-1005
               

               
Cow position:
               
chr29:44938144-44937778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 51
               

               
Conread position:
               
634-890
               

               
Cow position:
               
chr29:44008942-44008681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
8, 49
               

               
Conread position:
               
635-914
               

               
Cow position:
               
chr29:29314810-29314532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
640-972
               

               
Cow position:
               
chr29:3685661-3685334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
68, 41
               

               
Conread position:
               
643-972
               

               
Cow position:
               
chr29:35084370-35084036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
646-993
               

               
Cow position:
               
chr29:30227418-30227068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
647-884
               

               
Cow position:
               
chr29:26319040-26319265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
180, 25
               

               
Conread position:
               
647-1003
               

               
Cow position:
               
chr29:25793000-25793358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
18, 134
               

               
Conread position:
               
649-914
               

               
Cow position:
               
chr29:11398064-11397799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
649-972
               

               
Cow position:
               
chr29:18462696-18462367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
649-985
               

               
Cow position:
               
chr29:36220386-36220743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
86, 30
               

               
Conread position:
               
660-972
               

               
Cow position:
               
chr29:28735175-28734860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
76, 112
               

               
Conread position:
               
662-968
               

               
Cow position:
               
chr29:15947043-15947352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
25, 45
               

               
Conread position:
               
672-904
               

               
Cow position:
               
chr29:31813830-31814057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 78
               

               
Conread position:
               
672-980
               

               
Cow position:
               
chr29:13028318-13028645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
673-910
               

               
Cow position:
               
chr29:13867335-13867085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
8, 24
               

               
Conread position:
               
682-889
               

               
Cow position:
               
chr29:12626089-12625873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 207
               

               
Conread position:
               
682-910
               

               
Cow position:
               
chr29:18404223-18403993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
53, 62
               

               
Conread position:
               
682-986
               

               
Cow position:
               
chr29:7310578-7310864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
159, 52
               

               
Conread position:
               
682-992
               

               
Cow position:
               
chr29:40995000-40994675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
685-1005
               

               
Cow position:
               
chr29:5046545-5046871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
23, 200
               

               
Conread position:
               
691-894
               

               
Cow position:
               
chr29:27873503-27873709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
17, 51
               

               
Conread position:
               
696-996
               

               
Cow position:
               
chr29:20167326-20167634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
12, 191
               

               
Conread position:
               
701-975
               

               
Cow position:
               
chr29:19250258-19250533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
13, 57
               

               
Conread position:
               
706-914
               

               
Cow position:
               
chr29:42886466-42886670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
139, 31
               

               
Conread position:
               
706-1000
               

               
Cow position:
               
chr29:23813120-23812835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
137, 25
               

               
Conread position:
               
706-1002
               

               
Cow position:
               
chr29:20770259-20770561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
29, 179
               

               
Conread position:
               
706-1004
               

               
Cow position:
               
chr29:32894184-32894476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
29, 44
               

               
Conread position:
               
710-985
               

               
Cow position:
               
chr29:28993780-28994056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 51
               

               
Conread position:
               
713-996
               

               
Cow position:
               
chr29:21645247-21645528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
713-1000
               

               
Cow position:
               
chr29:43183385-43183102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
130, 18
               

               
Conread position:
               
713-1008
               

               
Cow position:
               
chr29:42630044-42630338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
10, 54
               

               
Conread position:
               
715-910
               

               
Cow position:
               
chr29:7103480-7103682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
21, 169
               

               
Conread position:
               
715-990
               

               
Cow position:
               
chr29:36952375-36952108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
20, 153
               

               
Conread position:
               
723-990
               

               
Cow position:
               
chr29:18450202-18449933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
724-961
               

               
Cow position:
               
chr29:40633580-40633829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
11, 44
               

               
Conread position:
               
726-986
               

               
Cow position:
               
chr29:23825604-23825863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
9, 166
               

               
Conread position:
               
727-986
               

               
Cow position:
               
chr29:17236372-17236623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
8, 32
               

               
Conread position:
               
728-968
               

               
Cow position:
               
chr29:43544663-43544422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
116, 38
               

               
Conread position:
               
729-975
               

               
Cow position:
               
chr29:501138-501391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
6, 44
               

               
Conread position:
               
729-986
               

               
Cow position:
               
chr29:5995162-5994888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
6, 162
               

               
Conread position:
               
731-975
               

               
Cow position:
               
chr29:1011632-1011403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
185, 24
               

               
Conread position:
               
731-985
               

               
Cow position:
               
chr29:16290666-16290923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
42, 151
               

               
Conread position:
               
731-1000
               

               
Cow position:
               
chr29:32656373-32656650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
742-878
               

               
Cow position:
               
chr29:19559069-19558926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
745-998
               

               
Cow position:
               
chr29:31934334-31934589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
98, 139
               

               
Conread position:
               
746-1000
               

               
Cow position:
               
chr29:4070587-4070832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
100, 14
               

               
Conread position:
               
753-979
               

               
Cow position:
               
chr29:40791273-40791491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
755-984
               

               
Cow position:
               
chr29:5788994-5789214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
88, 82
               

               
Conread position:
               
755-1005
               

               
Cow position:
               
chr29:396379-396618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
757-1003
               

               
Cow position:
               
chr29:28066458-28066697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
78, 123
               

               
Conread position:
               
758-993
               

               
Cow position:
               
chr29:5769763-5769997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
758-998
               

               
Cow position:
               
chr29:9310570-9310817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
758-1000
               

               
Cow position:
               
chr29:31981798-31982036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
7, 128
               

               
Conread position:
               
758-1004
               

               
Cow position:
               
chr29:44684070-44684314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
758-1008
               

               
Cow position:
               
chr29:5520517-5520262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
85, 124
               

               
Conread position:
               
759-1006
               

               
Cow position:
               
chr29:32307583-32307343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 66
               

               
Conread position:
               
760-971
               

               
Cow position:
               
chr29:23825241-23825026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 126
               

               
Conread position:
               
760-978
               

               
Cow position:
               
chr29:36357099-36357321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
72, 122
               

               
Conread position:
               
760-1005
               

               
Cow position:
               
chr29:29324452-29324199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
761-972
               

               
Cow position:
               
chr29:4423466-4423263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
84, 10
               

               
Conread position:
               
764-986
               

               
Cow position:
               
chr29:31651385-31651603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
70, 114
               

               
Conread position:
               
770-1000
               

               
Cow position:
               
chr29:16200499-16200263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
10, 112
               

               
Conread position:
               
772-975
               

               
Cow position:
               
chr29:934907-935116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
73, 51
               

               
Conread position:
               
772-982
               

               
Cow position:
               
chr29:3292930-3293140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
73, 111
               

               
Conread position:
               
772-985
               

               
Cow position:
               
chr29:38754957-38754738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 111
               

               
Conread position:
               
772-990
               

               
Cow position:
               
chr29:9378619-9378841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 113
               

               
Conread position:
               
772-999
               

               
Cow position:
               
chr29:24188083-24187850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 109
               

               
Conread position:
               
773-952
               

               
Cow position:
               
chr29:24051398-24051211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
72, 110
               

               
Conread position:
               
773-985
               

               
Cow position:
               
chr29:19176930-19176715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
71, 148
               

               
Conread position:
               
773-986
               

               
Cow position:
               
chr29:16278971-16279178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
774-1000
               

               
Cow position:
               
chr29:32656108-32655880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
70, 111
               

               
Conread position:
               
775-966
               

               
Cow position:
               
chr29:22723586-22723777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 109
               

               
Conread position:
               
775-978
               

               
Cow position:
               
chr29:21592693-21592892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 107
               

               
Conread position:
               
775-996
               

               
Cow position:
               
chr29:17804520-17804743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
68, 108
               

               
Conread position:
               
779-988
               

               
Cow position:
               
chr29:19363700-19363911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
66, 56
               

               
Conread position:
               
780-967
               

               
Cow position:
               
chr29:4053350-4053162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
65, 105
               

               
Conread position:
               
780-1006
               

               
Cow position:
               
chr29:8163837-8163610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
780-1006
               

               
Cow position:
               
chr29:22729558-22729786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
781-985
               

               
Cow position:
               
chr29:26540549-26540340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
64, 144
               

               
Conread position:
               
782-993
               

               
Cow position:
               
chr29:23142345-23142124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
30, 102
               

               
Conread position:
               
785-908
               

               
Cow position:
               
chr29:19244464-19244336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
60, 100
               

               
Conread position:
               
787-979
               

               
Cow position:
               
chr29:26631038-26631243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 22
               

               
Conread position:
               
787-997
               

               
Cow position:
               
chr29:43088308-43088518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 38
               

               
Conread position:
               
788-986
               

               
Cow position:
               
chr29:10658504-10658317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
792-1006
               

               
Cow position:
               
chr29:40351073-40350859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
793-999
               

               
Cow position:
               
chr29:14576862-14577072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
52, 90
               

               
Conread position:
               
793-1000
               

               
Cow position:
               
chr29:4441202-4440990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
793-1003
               

               
Cow position:
               
chr29:629541-629756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 91
               

               
Conread position:
               
794-998
               

               
Cow position:
               
chr29:685169-684968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
125, 84
               

               
Conread position:
               
794-1000
               

               
Cow position:
               
chr29:26211056-26211266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
51, 87
               

               
Conread position:
               
795-972
               

               
Cow position:
               
chr29:23913388-23913210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 83
               

               
Conread position:
               
795-986
               

               
Cow position:
               
chr29:4023009-4023196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
7, 11
               

               
Conread position:
               
795-993
               

               
Cow position:
               
chr29:3538672-3538477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 88
               

               
Conread position:
               
795-1000
               

               
Cow position:
               
chr29:8634659-8634868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 130
               

               
Conread position:
               
795-1004
               

               
Cow position:
               
chr29:17436756-17436966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
124, 81
               

               
Conread position:
               
796-1006
               

               
Cow position:
               
chr29:14375875-14375659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
47, 85
               

               
Conread position:
               
799-1002
               

               
Cow position:
               
chr29:25288914-25288698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 82
               

               
Conread position:
               
802-969
               

               
Cow position:
               
chr29:33393690-33393872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
802-1006
               

               
Cow position:
               
chr29:8799003-8798794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
804-944
               

               
Cow position:
               
chr29:40916821-40916966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
102, 75
               

               
Conread position:
               
804-1006
               

               
Cow position:
               
chr29:25432470-25432675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
8, 77
               

               
Conread position:
               
805-1005
               

               
Cow position:
               
chr29:37293054-37293247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
812-993
               

               
Cow position:
               
chr29:11894720-11894907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
33, 71
               

               
Conread position:
               
816-986
               

               
Cow position:
               
chr29:10203798-10203970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
817-963
               

               
Cow position:
               
chr29:28257168-28257320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
28, 77
               

               
Conread position:
               
818-1004
               

               
Cow position:
               
chr29:18748362-18748168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
27, 69
               

               
Conread position:
               
826-1007
               

               
Cow position:
               
chr29:23678745-23678923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
833-998
               

               
Cow position:
               
chr29:4741344-4741177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
10, 44
               

               
Conread position:
               
834-979
               

               
Cow position:
               
chr29:8841396-8841255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
834-1006
               

               
Cow position:
               
chr29:13063908-13064070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
835-990
               

               
Cow position:
               
chr29:22652373-22652524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
840-1006
               

               
Cow position:
               
chr29:11685222-11685390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
842-986
               

               
Cow position:
               
chr29:10191981-10191844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
842-994
               

               
Cow position:
               
chr29:10994569-10994718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
59, 37
               

               
Conread position:
               
845-1005
               

               
Cow position:
               
chr29:33018270-33018424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
125, 35
               

               
Conread position:
               
865-1004
               

               
Cow position:
               
chr29:31835352-31835484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               
Show alignments to all cow chromosomes.