Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8023G10.5 |
| Conread position: | 8-125 |
| Cow position: | chr11:54744073-54743957 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 152-240 |
| Cow position: | chr11:54738502-54738416 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 236-371 |
| Cow position: | chr11:54737138-54737003 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 124 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 369-528 |
| Cow position: | chr11:54731852-54731693 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 140 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 148, 155 |
| Conread position: | 509-636 |
| Cow position: | chr11:54730755-54730628 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 118 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 630-734 |
| Cow position: | chr11:54729299-54729195 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 733-856 |
| Cow position: | chr11:54726270-54726147 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 118 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 857-977 |
| Cow position: | chr11:54725681-54725561 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1030-1143 |
| Cow position: | chr11:54716964-54716851 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 111 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1143-1307 |
| Cow position: | chr11:59396258-59396422 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1277-1451 |
| Cow position: | chr11:54710960-54710786 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 151 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1449-1538 |
| Cow position: | chr11:54707652-54707563 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1535-1678 |
| Cow position: | chr11:54704826-54704683 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 129 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1742-1944 |
| Cow position: | chr11:54703203-54703001 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1942-2055 |
| Cow position: | chr11:54702311-54702198 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2052-2204 |
| Cow position: | chr11:54701645-54701493 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 134 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2202-2655 |
| Cow position: | chr11:54701408-54700948 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 301 |
| Conread position: | 2640-2822 |
| Cow position: | chr11:54700943-54700769 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 84, 0 |
Show alignments to all cow chromosomes.