Cow genome map

Conread name: Ss1.1-Pig4-TMW8024B18.5

Conread position: 1329-1523
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 58

Conread position: 1345-1518
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 13

Conread position: 1349-1501
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 1349-1519
Cow position:
Alignm length: 174
Alignm identity: 133
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 24, 166

Conread position: 1349-1521
Cow position:
Alignm length: 174
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 39, 134

Conread position: 1349-1521
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 39, 0

Conread position: 1349-1522
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1349-1522
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 54

Conread position: 1349-1522
Cow position:
Alignm length: 176
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 39, 68

Conread position: 1349-1523
Cow position:
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 0

Conread position: 1350-1522
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 5

Conread position: 1353-1490
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 1353-1499
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1504
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1507
Cow position:
Alignm length: 157
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 35, 96

Conread position: 1353-1509
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 69

Conread position: 1353-1512
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1514
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1514
Cow position:
Alignm length: 164
Alignm identity: 130
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 35, 87

Conread position: 1353-1515
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1515
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 152

Conread position: 1353-1515
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1515
Cow position:
Alignm length: 165
Alignm identity: 130
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1515
Cow position:
Alignm length: 165
Alignm identity: 132
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1515
Cow position:
Alignm length: 165
Alignm identity: 132
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1518
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 142

Conread position: 1353-1519
Cow position:
Alignm length: 168
Alignm identity: 128
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1519
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 47

Conread position: 1353-1521
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 134
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 134
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 34, 13

Conread position: 1353-1521
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 139
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 119

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 138
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 138
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 42

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 137
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 173
Alignm identity: 138
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 64

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 35, 87

Conread position: 1353-1522
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 141
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 35, 137

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 34, 48

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 35, 64

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 91

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 139
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 35, 48

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 35, 111

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 127

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 119

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1523
Cow position:
Alignm length: 173
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 76

Conread position: 1353-1523
Cow position:
Alignm length: 173
Alignm identity: 136
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1523
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 15

Conread position: 1353-1523
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 35, 30

Conread position: 1353-1523
Cow position:
Alignm length: 173
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 91

Conread position: 1355-1522
Cow position:
Alignm length: 169
Alignm identity: 133
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 129, 32

Conread position: 1357-1497
Cow position:
Alignm length: 143
Alignm identity: 115
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 1357-1518
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 127, 0

Conread position: 1357-1522
Cow position:
Alignm length: 168
Alignm identity: 135
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 30, 80

Conread position: 1357-1522
Cow position:
Alignm length: 168
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 1357-1522
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 31, 101

Conread position: 1357-1522
Cow position:
Alignm length: 168
Alignm identity: 135
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 30, 51

Conread position: 1357-1523
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 51

Conread position: 1357-1523
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 1362-1519
Cow position:
Alignm length: 160
Alignm identity: 130
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 25, 0

Conread position: 1362-1521
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 26, 143

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 126
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 26, 148

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 130
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position:
Alignm length: 162
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 121

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 128
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 132
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 131
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1524
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 26, 95

Conread position: 1363-1521
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 1364-1513
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 27, 39

Conread position: 1364-1521
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 1364-1522
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 1365-1509
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 1365-1522
Cow position:
Alignm length: 160
Alignm identity: 129
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 23, 0

Conread position: 1366-1505
Cow position:
Alignm length: 142
Alignm identity: 118
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 1366-1519
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 49

Conread position: 1366-1523
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 43

Conread position: 1367-1522
Cow position:
Alignm length: 157
Alignm identity: 128
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 80

Conread position: 1368-1521
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 133

Conread position: 1375-1521
Cow position:
Alignm length: 149
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 1385-1521
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 97, 0

Conread position: 1386-1522
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 1388-1522
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 1389-1521
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 0

Show alignments to all cow chromosomes.