Cow genome map

Conread name: Ss1.1-Pig4-TMW8024B18.5

Conread position: 3-322
Cow position: chr14:39825221-39824901 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 225

Conread position: 322-1330
Cow position: chr14:39824876-39823878 (view UCSC Genome Browser custom track)
Alignm length: 1042
Alignm identity: 813
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 41

Conread position: 1329-1515
Cow position: chr14:45083709-45083897 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 1330-1522
Cow position: chr14:39823223-39823030 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 43, 23

Conread position: 1348-1522
Cow position: chr14:29774063-29773889 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 40, 121

Conread position: 1349-1483
Cow position: chr14:36908152-36908017 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1349-1511
Cow position: chr14:21688327-21688486 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 33, 54

Conread position: 1349-1515
Cow position: chr14:49327439-49327281 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 52

Conread position: 1349-1521
Cow position: chr14:11475236-11475068 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 57

Conread position: 1349-1521
Cow position: chr14:36710991-36710815 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 1349-1522
Cow position: chr14:13781914-13782087 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 38, 95

Conread position: 1349-1522
Cow position: chr14:37256211-37256386 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 132, 0

Conread position: 1349-1522
Cow position: chr14:37335653-37335482 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 41, 100

Conread position: 1349-1522
Cow position: chr14:44381384-44381563 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 1352-1518
Cow position: chr14:13463487-13463651 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 82, 0

Conread position: 1352-1521
Cow position: chr14:17689180-17689350 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 140
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 35, 7

Conread position: 1353-1478
Cow position: chr14:26457186-26457314 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1499
Cow position: chr14:35292463-35292316 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 130, 0

Conread position: 1353-1510
Cow position: chr14:38434940-38435095 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 132

Conread position: 1353-1515
Cow position: chr14:2288313-2288477 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1515
Cow position: chr14:13861463-13861299 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1515
Cow position: chr14:43562998-43563161 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 133
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 154

Conread position: 1353-1518
Cow position: chr14:44553881-44554047 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 45

Conread position: 1353-1520
Cow position: chr14:46389206-46389036 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 1353-1521
Cow position: chr14:5531392-5531562 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position: chr14:9450477-9450307 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position: chr14:11151857-11151691 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 35, 21

Conread position: 1353-1521
Cow position: chr14:32473086-32472915 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position: chr14:34668732-34668562 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 138
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 30, 0

Conread position: 1353-1521
Cow position: chr14:50113423-50113592 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 138
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 24

Conread position: 1353-1522
Cow position: chr14:192108-192279 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr14:749545-749375 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 154

Conread position: 1353-1522
Cow position: chr14:1660509-1660679 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 144

Conread position: 1353-1522
Cow position: chr14:7988570-7988741 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr14:12740987-12740816 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 139
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 74

Conread position: 1353-1522
Cow position: chr14:14421350-14421181 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 19

Conread position: 1353-1522
Cow position: chr14:15273496-15273325 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr14:16917672-16917501 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr14:16997982-16997811 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr14:17489271-17489100 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr14:19326203-19326032 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr14:19549252-19549422 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 145

Conread position: 1353-1522
Cow position: chr14:22029411-22029245 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 34, 104

Conread position: 1353-1522
Cow position: chr14:23255284-23255115 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 35, 91

Conread position: 1353-1522
Cow position: chr14:28209955-28210126 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr14:29045624-29045450 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 1353-1522
Cow position: chr14:31684627-31684456 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr14:32449017-32449188 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr14:32584973-32584802 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr14:34904410-34904581 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr14:38460398-38460227 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr14:44691237-44691407 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 112, 68

Conread position: 1353-1522
Cow position: chr14:44889176-44889005 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 139
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 19, 54

Conread position: 1353-1522
Cow position: chr14:46123186-46123355 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 144
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 35, 91

Conread position: 1353-1522
Cow position: chr14:46222138-46222309 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr14:46503745-46503916 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr14:46638682-46638847 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 34, 131

Conread position: 1353-1522
Cow position: chr14:50143025-50143196 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1523
Cow position: chr14:17758561-17758392 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 35, 106

Conread position: 1353-1523
Cow position: chr14:44229350-44229519 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 76

Conread position: 1353-1523
Cow position: chr14:48827334-48827505 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 35, 69

Conread position: 1355-1519
Cow position: chr14:25694007-25694167 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 41, 81

Conread position: 1355-1522
Cow position: chr14:46375368-46375537 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 102

Conread position: 1357-1501
Cow position: chr14:35383587-35383440 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 124
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 30, 0

Conread position: 1357-1513
Cow position: chr14:41411809-41411964 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 33

Conread position: 1357-1518
Cow position: chr14:44481615-44481777 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 62, 32

Conread position: 1357-1521
Cow position: chr14:13580890-13581056 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 134
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 30, 0

Conread position: 1357-1522
Cow position: chr14:35931435-35931591 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 63

Conread position: 1357-1523
Cow position: chr14:14031319-14031157 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 37, 61

Conread position: 1362-1508
Cow position: chr14:37769039-37769187 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1518
Cow position: chr14:48147860-48147704 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 119

Conread position: 1362-1521
Cow position: chr14:30665522-30665363 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 26, 105

Conread position: 1362-1523
Cow position: chr14:27065706-27065544 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 138
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 26, 10

Conread position: 1362-1523
Cow position: chr14:32733313-32733152 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 137
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 26, 10

Conread position: 1362-1523
Cow position: chr14:44235712-44235875 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 1363-1509
Cow position: chr14:41445063-41445211 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 1363-1515
Cow position: chr14:45026890-45026736 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 1363-1519
Cow position: chr14:43560297-43560456 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 25, 83

Conread position: 1364-1519
Cow position: chr14:45236578-45236734 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 1364-1522
Cow position: chr14:11835699-11835859 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 1364-1522
Cow position: chr14:45087272-45087435 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 32, 64

Conread position: 1365-1522
Cow position: chr14:45149442-45149603 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 26, 134

Conread position: 1365-1523
Cow position: chr14:45164455-45164615 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 23, 0

Conread position: 1366-1518
Cow position: chr14:8899353-8899507 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 1366-1523
Cow position: chr14:44260534-44260693 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 1379-1522
Cow position: chr14:40344621-40344762 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 103, 7

Conread position: 1381-1521
Cow position: chr14:48490681-48490823 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 7, 0

Conread position: 1386-1522
Cow position: chr14:13237713-13237576 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 1386-1522
Cow position: chr14:20784957-20785094 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 96, 0

Conread position: 1390-1523
Cow position: chr14:12612091-12612221 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 1390-1523
Cow position: chr14:13320791-13320662 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 1391-1523
Cow position: chr14:37982200-37982067 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 1394-1515
Cow position: chr14:46301995-46302120 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 1394-1522
Cow position: chr14:27041285-27041156 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 0

Show alignments to all cow chromosomes.