Cow genome map

Conread name: Ss1.1-Pig4-TMW8024B18.5

Conread position: 1190-1510
Cow position:
Alignm length: 329
Alignm identity: 195
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 25, 16

Conread position: 1323-1523
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 1329-1523
Cow position:
Alignm length: 198
Alignm identity: 157
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 29, 16

Conread position: 1340-1522
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 47, 22

Conread position: 1349-1519
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 1349-1522
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 1349-1522
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 134, 34

Conread position: 1349-1522
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1349-1522
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 1349-1522
Cow position:
Alignm length: 175
Alignm identity: 138
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 133, 0

Conread position: 1349-1523
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 39, 115

Conread position: 1349-1523
Cow position:
Alignm length: 177
Alignm identity: 138
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1353-1499
Cow position:
Alignm length: 149
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 14

Conread position: 1353-1505
Cow position:
Alignm length: 155
Alignm identity: 128
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1505
Cow position:
Alignm length: 157
Alignm identity: 124
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 20, 12

Conread position: 1353-1506
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 60

Conread position: 1353-1509
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 110

Conread position: 1353-1511
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1512
Cow position:
Alignm length: 162
Alignm identity: 131
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1515
Cow position:
Alignm length: 165
Alignm identity: 131
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1515
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1515
Cow position:
Alignm length: 165
Alignm identity: 134
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1518
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1518
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 127

Conread position: 1353-1519
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 91

Conread position: 1353-1520
Cow position:
Alignm length: 169
Alignm identity: 135
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 129, 0

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 133
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1521
Cow position:
Alignm length: 170
Alignm identity: 135
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 132

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 134
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 0

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 134
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 173
Alignm identity: 138
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 49

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 34, 153

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 129, 15

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 34, 71

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 132

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 69

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 173
Alignm identity: 140
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 34, 102

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 130, 30

Conread position: 1353-1522
Cow position:
Alignm length: 173
Alignm identity: 136
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 104

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 139
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 139
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 132

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 157

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 35, 135

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 35, 102

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1523
Cow position:
Alignm length: 173
Alignm identity: 136
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1523
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1523
Cow position:
Alignm length: 175
Alignm identity: 134
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1523
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 34, 44

Conread position: 1353-1523
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 34, 126

Conread position: 1353-1524
Cow position:
Alignm length: 174
Alignm identity: 138
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 131, 27

Conread position: 1354-1521
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 34, 154

Conread position: 1354-1523
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 136

Conread position: 1354-1523
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 90

Conread position: 1354-1524
Cow position:
Alignm length: 178
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 59

Conread position: 1355-1515
Cow position:
Alignm length: 164
Alignm identity: 129
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 109, 25

Conread position: 1357-1521
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 1357-1522
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 146

Conread position: 1357-1522
Cow position:
Alignm length: 168
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 65

Conread position: 1357-1522
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 1357-1522
Cow position:
Alignm length: 167
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 83

Conread position: 1357-1522
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 99

Conread position: 1357-1522
Cow position:
Alignm length: 169
Alignm identity: 137
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 30, 100

Conread position: 1358-1521
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 127

Conread position: 1358-1523
Cow position:
Alignm length: 169
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 7

Conread position: 1362-1505
Cow position:
Alignm length: 146
Alignm identity: 117
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 1362-1509
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 92, 74

Conread position: 1362-1518
Cow position:
Alignm length: 159
Alignm identity: 130
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1518
Cow position:
Alignm length: 161
Alignm identity: 132
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 26, 41

Conread position: 1362-1519
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 95

Conread position: 1362-1521
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 128
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 26, 121

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 36

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 135
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 26, 90

Conread position: 1362-1523
Cow position:
Alignm length: 163
Alignm identity: 128
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 122, 32

Conread position: 1362-1523
Cow position:
Alignm length: 164
Alignm identity: 134
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 19, 119

Conread position: 1363-1521
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1363-1522
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 1363-1522
Cow position:
Alignm length: 162
Alignm identity: 128
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 1364-1501
Cow position:
Alignm length: 139
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 116

Conread position: 1364-1514
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 27

Conread position: 1364-1519
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 24, 98

Conread position: 1364-1522
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 1364-1522
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 24, 119

Conread position: 1365-1522
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 1365-1522
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 1366-1522
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 22, 84

Conread position: 1366-1522
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 17, 52

Conread position: 1366-1522
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 1366-1523
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 116

Conread position: 1367-1514
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 26, 39

Conread position: 1375-1521
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 1386-1522
Cow position:
Alignm length: 138
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 1386-1522
Cow position:
Alignm length: 138
Alignm identity: 112
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 96, 0

Conread position: 1387-1516
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 1395-1522
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 1401-1522
Cow position:
Alignm length: 123
Alignm identity: 101
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 83, 0

Show alignments to all cow chromosomes.