Cow genome map

Conread name: Ss1.1-Pig4-TMW8024B18.5

Conread position: 1201-1521
Cow position:
Alignm length: 326
Alignm identity: 167
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 149, 0

Conread position: 1305-1475
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 10

Conread position: 1329-1523
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 1335-1521
Cow position:
Alignm length: 190
Alignm identity: 150
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 9, 23

Conread position: 1345-1522
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 42, 17

Conread position: 1349-1512
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 133, 0

Conread position: 1349-1521
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 39, 0

Conread position: 1349-1521
Cow position:
Alignm length: 175
Alignm identity: 137
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1349-1522
Cow position:
Alignm length: 176
Alignm identity: 144
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 1349-1522
Cow position:
Alignm length: 175
Alignm identity: 140
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 136

Conread position: 1349-1522
Cow position:
Alignm length: 175
Alignm identity: 140
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 136

Conread position: 1349-1522
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 152

Conread position: 1349-1522
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 39, 59

Conread position: 1349-1523
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 42

Conread position: 1349-1524
Cow position:
Alignm length: 179
Alignm identity: 142
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 39, 19

Conread position: 1350-1522
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 43, 18

Conread position: 1350-1524
Cow position:
Alignm length: 177
Alignm identity: 142
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 40, 0

Conread position: 1353-1471
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1475
Cow position:
Alignm length: 127
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 1353-1481
Cow position:
Alignm length: 130
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1501
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1515
Cow position:
Alignm length: 165
Alignm identity: 129
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1519
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 149

Conread position: 1353-1519
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1519
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 35, 52

Conread position: 1353-1520
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 34, 141

Conread position: 1353-1520
Cow position:
Alignm length: 170
Alignm identity: 134
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 136
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1521
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 125, 20

Conread position: 1353-1521
Cow position:
Alignm length: 170
Alignm identity: 137
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 42

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 34, 52

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 137
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 134
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1521
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 138
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 35, 30

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 136
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 35, 148

Conread position: 1353-1522
Cow position:
Alignm length: 173
Alignm identity: 139
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 10, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 34, 69

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 26

Conread position: 1353-1522
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 133
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 183
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 104

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 34, 27

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 34, 141

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 34, 127

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 134
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 35, 131

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 50

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 134
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 126

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 34, 78

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 35, 131

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 137
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 65

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1523
Cow position:
Alignm length: 173
Alignm identity: 138
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1523
Cow position:
Alignm length: 173
Alignm identity: 149
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1523
Cow position:
Alignm length: 173
Alignm identity: 139
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 34, 44

Conread position: 1353-1523
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 126, 0

Conread position: 1353-1523
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 141

Conread position: 1354-1521
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 119

Conread position: 1354-1522
Cow position:
Alignm length: 173
Alignm identity: 137
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 1355-1521
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 33, 143

Conread position: 1357-1485
Cow position:
Alignm length: 130
Alignm identity: 106
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 1357-1519
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 127, 63

Conread position: 1357-1521
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 31, 87

Conread position: 1357-1522
Cow position:
Alignm length: 168
Alignm identity: 132
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 30, 65

Conread position: 1357-1522
Cow position:
Alignm length: 168
Alignm identity: 135
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 30, 0

Conread position: 1357-1522
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 1357-1522
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 20

Conread position: 1357-1522
Cow position:
Alignm length: 168
Alignm identity: 136
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 31, 0

Conread position: 1359-1522
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 124

Conread position: 1360-1522
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 27, 96

Conread position: 1362-1521
Cow position:
Alignm length: 168
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1521
Cow position:
Alignm length: 162
Alignm identity: 128
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 27, 0

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 26, 82

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position:
Alignm length: 162
Alignm identity: 127
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 26, 116

Conread position: 1362-1523
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1523
Cow position:
Alignm length: 166
Alignm identity: 129
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 26, 42

Conread position: 1362-1523
Cow position:
Alignm length: 164
Alignm identity: 140
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 25, 0

Conread position: 1363-1508
Cow position:
Alignm length: 148
Alignm identity: 119
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 25, 132

Conread position: 1364-1518
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 88

Conread position: 1364-1522
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 117, 0

Conread position: 1364-1522
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 1364-1523
Cow position:
Alignm length: 161
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 118, 24

Conread position: 1364-1523
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 122

Conread position: 1365-1481
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 1366-1519
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 39

Conread position: 1366-1522
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 18

Conread position: 1368-1522
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 1375-1523
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 46

Conread position: 1379-1522
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 1384-1524
Cow position:
Alignm length: 142
Alignm identity: 105
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 1386-1522
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 1386-1522
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 1394-1521
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 1402-1522
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 0

Show alignments to all cow chromosomes.