Cow genome map

Conread name: Ss1.1-Pig4-TMW8024B18.5

Conread position: 1331-1522
Cow position: chr17:24784423-24784614 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 57, 30

Conread position: 1332-1523
Cow position: chr17:20079633-20079437 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 14, 8

Conread position: 1345-1521
Cow position: chr17:2176249-2176428 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1349-1500
Cow position: chr17:146147-145994 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 1349-1515
Cow position: chr17:2032504-2032673 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 133, 0

Conread position: 1349-1518
Cow position: chr17:13690130-13689961 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 30

Conread position: 1349-1521
Cow position: chr17:732222-732046 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 104, 0

Conread position: 1349-1522
Cow position: chr17:1705672-1705845 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 95

Conread position: 1349-1522
Cow position: chr17:9752062-9752238 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 1349-1522
Cow position: chr17:22107373-22107198 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 1350-1514
Cow position: chr17:20490583-20490750 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1353-1475
Cow position: chr17:1704561-1704438 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1493
Cow position: chr17:38617347-38617487 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 16

Conread position: 1353-1496
Cow position: chr17:37455053-37454909 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1501
Cow position: chr17:5044937-5044786 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 1353-1501
Cow position: chr17:11085405-11085255 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1504
Cow position: chr17:2553984-2553832 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 148

Conread position: 1353-1505
Cow position: chr17:15327560-15327713 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1509
Cow position: chr17:2245769-2245614 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 19

Conread position: 1353-1509
Cow position: chr17:15720731-15720886 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 131, 34

Conread position: 1353-1514
Cow position: chr17:41412124-41412282 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 67

Conread position: 1353-1515
Cow position: chr17:6070811-6070973 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 141

Conread position: 1353-1515
Cow position: chr17:23322151-23321989 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 91

Conread position: 1353-1518
Cow position: chr17:36815967-36816135 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1521
Cow position: chr17:1570113-1569943 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1521
Cow position: chr17:8204202-8204373 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1521
Cow position: chr17:20098037-20097871 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 35, 51

Conread position: 1353-1521
Cow position: chr17:22562422-22562592 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 138
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1521
Cow position: chr17:33283062-33282895 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 55

Conread position: 1353-1522
Cow position: chr17:40579-40750 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr17:136916-137087 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr17:253094-253267 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr17:1458667-1458840 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr17:1882546-1882714 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 125, 32

Conread position: 1353-1522
Cow position: chr17:2264462-2264633 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr17:3742437-3742608 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr17:4084297-4084461 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 57

Conread position: 1353-1522
Cow position: chr17:5307462-5307291 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr17:6262137-6262308 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 139
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 30, 0

Conread position: 1353-1522
Cow position: chr17:13418677-13418848 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr17:13930168-13930339 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr17:14214760-14214589 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 29, 121

Conread position: 1353-1522
Cow position: chr17:15438072-15438243 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr17:15709716-15709545 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr17:15808248-15808419 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr17:15852997-15853168 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr17:16855821-16855650 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr17:16903159-16903330 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 140
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr17:17127244-17127415 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr17:17257796-17257963 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position: chr17:18100807-18100636 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 140
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 103

Conread position: 1353-1522
Cow position: chr17:18124662-18124492 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 130, 0

Conread position: 1353-1522
Cow position: chr17:20085495-20085331 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 124, 15

Conread position: 1353-1522
Cow position: chr17:20233024-20233195 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr17:21768838-21768667 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr17:25738574-25738745 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr17:27792506-27792335 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr17:29825688-29825523 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 35, 131

Conread position: 1353-1523
Cow position: chr17:11380913-11380741 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 141
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1523
Cow position: chr17:16119954-16119785 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 53

Conread position: 1353-1523
Cow position: chr17:39950790-39950618 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 138
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1524
Cow position: chr17:452109-452282 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1354-1521
Cow position: chr17:14030570-14030401 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 1354-1522
Cow position: chr17:14242102-14242272 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 1355-1522
Cow position: chr17:4062608-4062777 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 1356-1518
Cow position: chr17:20511421-20511255 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 65

Conread position: 1357-1519
Cow position: chr17:7561673-7561514 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 1357-1521
Cow position: chr17:1655473-1655307 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 1357-1522
Cow position: chr17:38828196-38828361 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 124

Conread position: 1362-1477
Cow position: chr17:20404720-20404836 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1506
Cow position: chr17:4210298-4210444 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position: chr17:147216-147378 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 133
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1523
Cow position: chr17:14251024-14250857 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 55

Conread position: 1363-1522
Cow position: chr17:8210938-8211099 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 1364-1507
Cow position: chr17:17132639-17132782 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 118, 136

Conread position: 1364-1518
Cow position: chr17:33290684-33290525 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 1364-1521
Cow position: chr17:21714271-21714429 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 1366-1518
Cow position: chr17:18590718-18590869 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 116, 23

Conread position: 1366-1521
Cow position: chr17:240581-240737 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 101

Conread position: 1366-1523
Cow position: chr17:51908-51751 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 65

Conread position: 1368-1522
Cow position: chr17:40809485-40809637 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 117

Conread position: 1385-1522
Cow position: chr17:14898588-14898727 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 1386-1522
Cow position: chr17:11785188-11785325 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 1389-1522
Cow position: chr17:19216110-19215976 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 98, 0

Show alignments to all cow chromosomes.