Cow genome map

Conread name: Ss1.1-Pig4-TMW8024B18.5

Conread position: 1327-1509
Cow position: chr20:19243911-19244092 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 61, 24

Conread position: 1333-1482
Cow position: chr20:8890204-8890356 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1333-1522
Cow position: chr20:825217-825411 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 1338-1483
Cow position: chr20:13576679-13576533 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 50, 43

Conread position: 1345-1522
Cow position: chr20:21719020-21719200 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 9

Conread position: 1349-1519
Cow position: chr20:25332481-25332314 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 135, 40

Conread position: 1349-1522
Cow position: chr20:10495448-10495622 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 113, 107

Conread position: 1349-1523
Cow position: chr20:35019378-35019554 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 1350-1510
Cow position: chr20:29313277-29313439 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 43, 140

Conread position: 1353-1481
Cow position: chr20:29757817-29757688 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1501
Cow position: chr20:35144419-35144268 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1506
Cow position: chr20:13500761-13500913 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 56

Conread position: 1353-1509
Cow position: chr20:28959101-28958943 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 1353-1515
Cow position: chr20:8214534-8214376 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 125

Conread position: 1353-1515
Cow position: chr20:19844251-19844410 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 132

Conread position: 1353-1516
Cow position: chr20:9587241-9587397 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 124

Conread position: 1353-1521
Cow position: chr20:6475991-6476161 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 35, 102

Conread position: 1353-1521
Cow position: chr20:10867325-10867154 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 1353-1521
Cow position: chr20:10922458-10922288 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1521
Cow position: chr20:14721920-14721748 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 120

Conread position: 1353-1521
Cow position: chr20:15095442-15095272 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position: chr20:23801352-23801522 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1353-1521
Cow position: chr20:23805416-23805247 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 137
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 128, 0

Conread position: 1353-1521
Cow position: chr20:28163505-28163675 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 138
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position: chr20:35160119-35159950 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr20:752608-752779 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr20:3809309-3809138 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr20:5537390-5537560 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 23

Conread position: 1353-1522
Cow position: chr20:6136528-6136358 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 98

Conread position: 1353-1522
Cow position: chr20:12568850-12568680 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 99

Conread position: 1353-1522
Cow position: chr20:13765358-13765528 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 34, 111

Conread position: 1353-1522
Cow position: chr20:16560081-16559910 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr20:17659285-17659115 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 139
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr20:18355691-18355862 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr20:19440376-19440546 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 88

Conread position: 1353-1522
Cow position: chr20:20440489-20440320 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 130, 28

Conread position: 1353-1522
Cow position: chr20:21396989-21397154 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 1353-1522
Cow position: chr20:23467203-23467032 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr20:24541886-24542057 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr20:24568809-24568638 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr20:25846160-25845989 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 1353-1522
Cow position: chr20:27875943-27876113 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr20:28293782-28293950 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 129, 67

Conread position: 1353-1522
Cow position: chr20:28444887-28444716 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr20:30578352-30578519 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position: chr20:30688034-30688204 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 114

Conread position: 1353-1522
Cow position: chr20:39233691-39233862 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1523
Cow position: chr20:12046976-12047147 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 34, 27

Conread position: 1353-1523
Cow position: chr20:13954115-13954286 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 157

Conread position: 1353-1523
Cow position: chr20:35844854-35844681 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 155

Conread position: 1354-1519
Cow position: chr20:9995761-9995926 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 34, 98

Conread position: 1354-1522
Cow position: chr20:12435935-12435765 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 33, 0

Conread position: 1354-1523
Cow position: chr20:14757794-14757623 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 1357-1522
Cow position: chr20:15294432-15294599 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 1357-1523
Cow position: chr20:13654818-13654658 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 31, 59

Conread position: 1357-1524
Cow position: chr20:13794591-13794760 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 1362-1519
Cow position: chr20:34459834-34459680 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 26, 79

Conread position: 1362-1522
Cow position: chr20:16105901-16106063 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 1362-1522
Cow position: chr20:18093715-18093553 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 1364-1498
Cow position: chr20:19424518-19424653 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 55

Conread position: 1364-1522
Cow position: chr20:30430743-30430903 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 1365-1522
Cow position: chr20:12693513-12693674 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 1365-1522
Cow position: chr20:16177291-16177132 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 1370-1522
Cow position: chr20:18969203-18969358 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1376-1522
Cow position: chr20:8971407-8971260 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 46

Conread position: 1381-1522
Cow position: chr20:7811339-7811201 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 103, 0

Conread position: 1386-1522
Cow position: chr20:8200711-8200848 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 1386-1522
Cow position: chr20:30385752-30385617 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 1387-1521
Cow position: chr20:19342597-19342730 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 0

Show alignments to all cow chromosomes.