Cow genome map
Conread name: | Ss1.1-Pig4-TMW8024B18.5 |
Conread position: | 1257-1522 |
Cow position: | chr21:47976485-47976751 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 105 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 226, 0 |
Conread position: | 1349-1521 |
Cow position: | chr21:469671-469841 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 133 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 39, 136 |
Conread position: | 1349-1521 |
Cow position: | chr21:13112824-13112650 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 142 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 1349-1522 |
Cow position: | chr21:5019714-5019889 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 138 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 1349-1523 |
Cow position: | chr21:4186513-4186692 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 135 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 1350-1519 |
Cow position: | chr21:5594299-5594465 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 128 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 37, 59 |
Conread position: | 1353-1487 |
Cow position: | chr21:37123783-37123651 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 107 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 35, 88 |
Conread position: | 1353-1505 |
Cow position: | chr21:47943525-47943678 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 115 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 35, 30 |
Conread position: | 1353-1506 |
Cow position: | chr21:10519391-10519546 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 120 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 1353-1506 |
Cow position: | chr21:28879142-28878988 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 125 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 35, 55 |
Conread position: | 1353-1512 |
Cow position: | chr21:33984725-33984564 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 118 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 1353-1514 |
Cow position: | chr21:24948678-24948842 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 134 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 1353-1514 |
Cow position: | chr21:35143334-35143171 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 125 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 1353-1514 |
Cow position: | chr21:36375561-36375724 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 128 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 1353-1519 |
Cow position: | chr21:49297398-49297566 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 121 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 1353-1520 |
Cow position: | chr21:27620925-27620756 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 130 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 1353-1521 |
Cow position: | chr21:41790-41965 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 135 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 1353-1521 |
Cow position: | chr21:1195115-1195280 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 130 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 34, 50 |
Conread position: | 1353-1521 |
Cow position: | chr21:2513424-2513589 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 127 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 35, 130 |
Conread position: | 1353-1521 |
Cow position: | chr21:3805500-3805663 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 131 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 40, 69 |
Conread position: | 1353-1521 |
Cow position: | chr21:10852838-10853007 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 132 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 34, 152 |
Conread position: | 1353-1521 |
Cow position: | chr21:15398403-15398233 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 135 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 1353-1521 |
Cow position: | chr21:27148983-27148811 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 132 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 1353-1521 |
Cow position: | chr21:33256127-33256297 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 134 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 1353-1522 |
Cow position: | chr21:148720-148891 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 134 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 1353-1522 |
Cow position: | chr21:2418778-2418944 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 130 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 35, 83 |
Conread position: | 1353-1522 |
Cow position: | chr21:2538577-2538407 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 133 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 34, 116 |
Conread position: | 1353-1522 |
Cow position: | chr21:2665566-2665396 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 125 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 34, 141 |
Conread position: | 1353-1522 |
Cow position: | chr21:6966894-6966729 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 130 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 35, 131 |
Conread position: | 1353-1522 |
Cow position: | chr21:7063097-7062926 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 131 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 1353-1522 |
Cow position: | chr21:7154907-7155075 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 132 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 1353-1522 |
Cow position: | chr21:10569266-10569437 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 133 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 1353-1522 |
Cow position: | chr21:11291261-11291432 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 131 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 1353-1522 |
Cow position: | chr21:17143249-17143420 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 142 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 1353-1522 |
Cow position: | chr21:19352290-19352119 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 134 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 1353-1522 |
Cow position: | chr21:25189215-25189385 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 131 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 34, 16 |
Conread position: | 1353-1522 |
Cow position: | chr21:26634585-26634415 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 131 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 35, 111 |
Conread position: | 1353-1522 |
Cow position: | chr21:26700092-26699921 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 140 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 1353-1522 |
Cow position: | chr21:27068388-27068217 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 137 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 1353-1522 |
Cow position: | chr21:30564328-30564494 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 131 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 34, 104 |
Conread position: | 1353-1522 |
Cow position: | chr21:33317931-33317760 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 134 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 1353-1522 |
Cow position: | chr21:34656534-34656704 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 143 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 35, 77 |
Conread position: | 1353-1522 |
Cow position: | chr21:34902809-34902643 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 129 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 35, 130 |
Conread position: | 1353-1522 |
Cow position: | chr21:37373799-37373968 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 135 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 35, 132 |
Conread position: | 1353-1522 |
Cow position: | chr21:39225483-39225317 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 130 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 35, 83 |
Conread position: | 1353-1522 |
Cow position: | chr21:39427649-39427820 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 132 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 1353-1522 |
Cow position: | chr21:41797150-41796979 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 129 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 1353-1522 |
Cow position: | chr21:42916366-42916535 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 134 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 35, 91 |
Conread position: | 1353-1522 |
Cow position: | chr21:44763389-44763218 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 137 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 1353-1522 |
Cow position: | chr21:46975491-46975331 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 123 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 113, 0 |
Conread position: | 1353-1522 |
Cow position: | chr21:47647908-47648079 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 137 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 1353-1523 |
Cow position: | chr21:4078620-4078792 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 134 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 1353-1523 |
Cow position: | chr21:15548301-15548129 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 129 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 1353-1523 |
Cow position: | chr21:24298951-24298783 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 137 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 35, 44 |
Conread position: | 1354-1506 |
Cow position: | chr21:995857-995703 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 129 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 19, 143 |
Conread position: | 1354-1518 |
Cow position: | chr21:23803118-23802956 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 123 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 33, 19 |
Conread position: | 1354-1522 |
Cow position: | chr21:4736864-4736699 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 128 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 33, 44 |
Conread position: | 1354-1522 |
Cow position: | chr21:37040043-37039873 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 136 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 1355-1513 |
Cow position: | chr21:20742092-20741932 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 129 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 1357-1496 |
Cow position: | chr21:31513742-31513601 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 113 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 1357-1511 |
Cow position: | chr21:28853268-28853115 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 116 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 20, 95 |
Conread position: | 1357-1522 |
Cow position: | chr21:34256016-34255851 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 128 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 31, 138 |
Conread position: | 1357-1522 |
Cow position: | chr21:48529845-48529678 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 130 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 1358-1522 |
Cow position: | chr21:30596511-30596345 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 133 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 1360-1522 |
Cow position: | chr21:5938041-5938205 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 130 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 1362-1518 |
Cow position: | chr21:35390555-35390407 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 120 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 25, 39 |
Conread position: | 1362-1522 |
Cow position: | chr21:2879246-2879084 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 129 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 1362-1522 |
Cow position: | chr21:4091915-4092077 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 126 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 1362-1522 |
Cow position: | chr21:4481878-4482040 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 124 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 1362-1522 |
Cow position: | chr21:27286026-27286188 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 130 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 1362-1522 |
Cow position: | chr21:28614898-28615061 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 130 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 25, 41 |
Conread position: | 1362-1522 |
Cow position: | chr21:32397469-32397307 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 128 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 1362-1522 |
Cow position: | chr21:40268802-40268640 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 130 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 1364-1521 |
Cow position: | chr21:13299430-13299582 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 125 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 24, 116 |
Conread position: | 1364-1523 |
Cow position: | chr21:22462778-22462939 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 116 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 1365-1522 |
Cow position: | chr21:3781371-3781530 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 128 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 1368-1521 |
Cow position: | chr21:4587398-4587244 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 122 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 82, 74 |
Conread position: | 1369-1520 |
Cow position: | chr21:19613326-19613479 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 118 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 1376-1510 |
Cow position: | chr21:24694742-24694873 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 102 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 1376-1522 |
Cow position: | chr21:21171710-21171562 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 118 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 1386-1522 |
Cow position: | chr21:5544043-5543906 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 105 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 1389-1522 |
Cow position: | chr21:26455800-26455933 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 103 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 94, 111 |
Show alignments to all cow chromosomes.