Cow genome map

Conread name: Ss1.1-Pig4-TMW8024B18.5

Conread position: 1191-1515
Cow position:
Alignm length: 360
Alignm identity: 248
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 125

Conread position: 1329-1522
Cow position:
Alignm length: 196
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 21, 47

Conread position: 1329-1523
Cow position:
Alignm length: 197
Alignm identity: 152
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 59, 138

Conread position: 1332-1523
Cow position:
Alignm length: 194
Alignm identity: 153
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 56, 6

Conread position: 1345-1521
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 13, 142

Conread position: 1349-1519
Cow position:
Alignm length: 171
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 1349-1519
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 39, 0

Conread position: 1349-1521
Cow position:
Alignm length: 175
Alignm identity: 138
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1349-1522
Cow position:
Alignm length: 176
Alignm identity: 140
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1349-1522
Cow position:
Alignm length: 177
Alignm identity: 140
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 10, 62

Conread position: 1349-1522
Cow position:
Alignm length: 176
Alignm identity: 137
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1349-1522
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 1349-1523
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 123

Conread position: 1351-1523
Cow position:
Alignm length: 175
Alignm identity: 138
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 1352-1523
Cow position:
Alignm length: 173
Alignm identity: 137
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 130, 0

Conread position: 1353-1467
Cow position:
Alignm length: 116
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1501
Cow position:
Alignm length: 151
Alignm identity: 122
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1501
Cow position:
Alignm length: 153
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 66

Conread position: 1353-1506
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 91

Conread position: 1353-1512
Cow position:
Alignm length: 162
Alignm identity: 130
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1514
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1515
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 70, 98

Conread position: 1353-1515
Cow position:
Alignm length: 165
Alignm identity: 131
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 1353-1515
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1519
Cow position:
Alignm length: 169
Alignm identity: 134
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 38, 19

Conread position: 1353-1519
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 131, 36

Conread position: 1353-1521
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 35, 98

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 134
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 137
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 104

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 69

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 34, 104

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 103

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 138
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 130, 28

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 139
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 99

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 138
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 129, 36

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 133

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 132

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 34, 125

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 20

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 74

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 142
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 30, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 91

Conread position: 1353-1522
Cow position:
Alignm length: 179
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 48

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 129, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 36, 69

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 103

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 137
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 139
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 8

Conread position: 1353-1522
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1523
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 23

Conread position: 1353-1523
Cow position:
Alignm length: 173
Alignm identity: 143
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 37, 64

Conread position: 1354-1477
Cow position:
Alignm length: 125
Alignm identity: 104
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 1355-1521
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 1357-1494
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 1357-1518
Cow position:
Alignm length: 164
Alignm identity: 118
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 52, 112

Conread position: 1357-1521
Cow position:
Alignm length: 167
Alignm identity: 134
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 31, 0

Conread position: 1357-1521
Cow position:
Alignm length: 167
Alignm identity: 133
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 30, 0

Conread position: 1357-1522
Cow position:
Alignm length: 168
Alignm identity: 134
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 30, 0

Conread position: 1357-1522
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 124

Conread position: 1357-1523
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 1357-1523
Cow position:
Alignm length: 169
Alignm identity: 137
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 48

Conread position: 1358-1499
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 1360-1522
Cow position:
Alignm length: 165
Alignm identity: 129
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 28, 0

Conread position: 1362-1501
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 121

Conread position: 1362-1509
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 143

Conread position: 1362-1515
Cow position:
Alignm length: 156
Alignm identity: 128
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1521
Cow position:
Alignm length: 161
Alignm identity: 127
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 132
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 25, 0

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 131
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 26, 138

Conread position: 1362-1523
Cow position:
Alignm length: 163
Alignm identity: 134
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 116, 0

Conread position: 1362-1523
Cow position:
Alignm length: 164
Alignm identity: 135
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 25, 0

Conread position: 1363-1521
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 1364-1519
Cow position:
Alignm length: 160
Alignm identity: 126
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 7, 90

Conread position: 1365-1515
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 119, 42

Conread position: 1365-1518
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 1365-1522
Cow position:
Alignm length: 160
Alignm identity: 128
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 53

Conread position: 1366-1523
Cow position:
Alignm length: 167
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 89

Conread position: 1367-1522
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 116, 0

Conread position: 1368-1508
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 1368-1519
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 117, 37

Conread position: 1369-1510
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 73

Conread position: 1371-1515
Cow position:
Alignm length: 146
Alignm identity: 118
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 107

Conread position: 1377-1522
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 105, 16

Conread position: 1377-1522
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 110, 85

Conread position: 1378-1522
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 116

Conread position: 1381-1513
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 102, 40

Conread position: 1383-1521
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 12

Conread position: 1387-1521
Cow position:
Alignm length: 136
Alignm identity: 111
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 95, 0

Conread position: 1390-1522
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 1392-1521
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 90, 0

Show alignments to all cow chromosomes.