Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8024B18.5 |
| Conread position: | 1305-1522 |
| Cow position: | chr23:29448871-29448655 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 83, 10 |
| Conread position: | 1320-1506 |
| Cow position: | chr23:11815480-11815289 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1329-1522 |
| Cow position: | chr23:35925865-35926060 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 21, 185 |
| Conread position: | 1349-1521 |
| Cow position: | chr23:38580049-38580223 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1349-1522 |
| Cow position: | chr23:2760294-2760464 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 75 |
| Conread position: | 1349-1522 |
| Cow position: | chr23:2792375-2792200 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1349-1522 |
| Cow position: | chr23:28221096-28221271 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1349-1522 |
| Cow position: | chr23:36028991-36028816 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1349-1522 |
| Cow position: | chr23:38583336-38583509 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 39, 96 |
| Conread position: | 1349-1523 |
| Cow position: | chr23:30212453-30212278 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 42, 86 |
| Conread position: | 1353-1514 |
| Cow position: | chr23:1958556-1958719 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1353-1515 |
| Cow position: | chr23:8705258-8705418 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 35, 130 |
| Conread position: | 1353-1515 |
| Cow position: | chr23:14264741-14264905 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1518 |
| Cow position: | chr23:1339380-1339213 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1519 |
| Cow position: | chr23:2438915-2438745 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1353-1519 |
| Cow position: | chr23:5872170-5872001 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1520 |
| Cow position: | chr23:4308783-4308614 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1353-1521 |
| Cow position: | chr23:1050131-1049962 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1353-1521 |
| Cow position: | chr23:2024691-2024521 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1353-1521 |
| Cow position: | chr23:2411243-2411073 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1353-1521 |
| Cow position: | chr23:11781187-11781359 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1353-1521 |
| Cow position: | chr23:22169281-22169451 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 34, 104 |
| Conread position: | 1353-1522 |
| Cow position: | chr23:609125-609290 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 35, 130 |
| Conread position: | 1353-1522 |
| Cow position: | chr23:943371-943542 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr23:1003287-1003118 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 35, 132 |
| Conread position: | 1353-1522 |
| Cow position: | chr23:2586476-2586646 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 34, 137 |
| Conread position: | 1353-1522 |
| Cow position: | chr23:3417935-3417766 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 27, 104 |
| Conread position: | 1353-1522 |
| Cow position: | chr23:4080535-4080706 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr23:4436051-4436219 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 35, 132 |
| Conread position: | 1353-1522 |
| Cow position: | chr23:4515934-4516105 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr23:4891087-4891256 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 34, 20 |
| Conread position: | 1353-1522 |
| Cow position: | chr23:7313699-7313528 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr23:14960557-14960386 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr23:15179461-15179632 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr23:15527980-15528151 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr23:15568530-15568358 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr23:16496874-16496704 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 35, 26 |
| Conread position: | 1353-1522 |
| Cow position: | chr23:19316878-19317049 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr23:20153826-20153657 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 34, 69 |
| Conread position: | 1353-1522 |
| Cow position: | chr23:21773519-21773348 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr23:22989482-22989311 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr23:36097213-36097384 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr23:37200124-37199953 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr23:41142735-41142905 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 35, 150 |
| Conread position: | 1353-1523 |
| Cow position: | chr23:10556691-10556519 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1523 |
| Cow position: | chr23:31892448-31892613 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 125, 36 |
| Conread position: | 1357-1462 |
| Cow position: | chr23:19441469-19441363 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1357-1521 |
| Cow position: | chr23:8289819-8289985 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1357-1522 |
| Cow position: | chr23:14971549-14971383 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 1357-1522 |
| Cow position: | chr23:19491955-19492122 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1357-1522 |
| Cow position: | chr23:29442700-29442533 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1357-1522 |
| Cow position: | chr23:34256559-34256392 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1357-1523 |
| Cow position: | chr23:1800037-1800203 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 31, 137 |
| Conread position: | 1362-1513 |
| Cow position: | chr23:11713456-11713303 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1362-1522 |
| Cow position: | chr23:1011429-1011265 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 96 |
| Conread position: | 1362-1522 |
| Cow position: | chr23:2321540-2321380 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 125 |
| Conread position: | 1362-1522 |
| Cow position: | chr23:2578997-2579158 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 25, 33 |
| Conread position: | 1362-1522 |
| Cow position: | chr23:4637922-4637759 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1362-1523 |
| Cow position: | chr23:16612395-16612234 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 26, 132 |
| Conread position: | 1364-1521 |
| Cow position: | chr23:3878686-3878528 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 23, 92 |
| Conread position: | 1365-1522 |
| Cow position: | chr23:1021517-1021359 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 1365-1522 |
| Cow position: | chr23:3285166-3285320 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 1365-1522 |
| Cow position: | chr23:4533193-4533033 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1366-1522 |
| Cow position: | chr23:15504423-15504577 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 106, 23 |
| Conread position: | 1373-1522 |
| Cow position: | chr23:15216421-15216271 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 14, 22 |
| Conread position: | 1384-1522 |
| Cow position: | chr23:19621416-19621281 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1386-1499 |
| Cow position: | chr23:1326965-1326851 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1386-1522 |
| Cow position: | chr23:21009180-21009043 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1390-1515 |
| Cow position: | chr23:5625148-5625021 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
Show alignments to all cow chromosomes.