Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8024B18.5 |
| Conread position: | 1329-1522 |
| Cow position: | chr24:40467958-40467762 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1331-1522 |
| Cow position: | chr24:12466702-12466893 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 57, 16 |
| Conread position: | 1348-1522 |
| Cow position: | chr24:19704181-19704353 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 40, 134 |
| Conread position: | 1349-1519 |
| Cow position: | chr24:36557100-36556927 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1349-1521 |
| Cow position: | chr24:12126617-12126443 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1349-1522 |
| Cow position: | chr24:17323173-17323348 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1349-1522 |
| Cow position: | chr24:23093563-23093389 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1349-1522 |
| Cow position: | chr24:23096301-23096127 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1349-1522 |
| Cow position: | chr24:40551104-40551279 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1349-1523 |
| Cow position: | chr24:6338847-6339024 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 5, 51 |
| Conread position: | 1353-1505 |
| Cow position: | chr24:19835892-19836046 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1353-1510 |
| Cow position: | chr24:11150640-11150481 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1515 |
| Cow position: | chr24:14722926-14723087 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 81, 22 |
| Conread position: | 1353-1515 |
| Cow position: | chr24:18268002-18267839 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 35, 76 |
| Conread position: | 1353-1518 |
| Cow position: | chr24:36724551-36724718 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1353-1521 |
| Cow position: | chr24:12088685-12088855 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1353-1521 |
| Cow position: | chr24:13177698-13177531 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 141 |
| Conread position: | 1353-1521 |
| Cow position: | chr24:14350483-14350653 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1521 |
| Cow position: | chr24:19884778-19884948 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1353-1521 |
| Cow position: | chr24:39680008-39680171 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 35, 127 |
| Conread position: | 1353-1522 |
| Cow position: | chr24:146113-145935 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr24:208517-208350 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 35, 130 |
| Conread position: | 1353-1522 |
| Cow position: | chr24:6021595-6021425 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 117 |
| Conread position: | 1353-1522 |
| Cow position: | chr24:6411964-6412134 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 142 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr24:6440237-6440408 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr24:6963333-6963504 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr24:7064047-7064219 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr24:11691515-11691344 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr24:12333237-12333066 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr24:13234724-13234895 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr24:14195378-14195207 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr24:16082003-16081832 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr24:19689096-19688927 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 35, 91 |
| Conread position: | 1353-1522 |
| Cow position: | chr24:20284859-20284691 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 34, 103 |
| Conread position: | 1353-1522 |
| Cow position: | chr24:20366850-20367021 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr24:21248463-21248292 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr24:25371419-25371590 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr24:29189771-29189942 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1353-1522 |
| Cow position: | chr24:38584659-38584491 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 34, 15 |
| Conread position: | 1353-1522 |
| Cow position: | chr24:41004968-41005135 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 132 |
| Conread position: | 1353-1523 |
| Cow position: | chr24:31380902-31381072 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 35, 129 |
| Conread position: | 1353-1524 |
| Cow position: | chr24:16647420-16647247 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1357-1515 |
| Cow position: | chr24:6657768-6657608 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1357-1518 |
| Cow position: | chr24:19642408-19642571 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1357-1522 |
| Cow position: | chr24:12148612-12148445 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1357-1522 |
| Cow position: | chr24:16559816-16559649 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1357-1522 |
| Cow position: | chr24:32362633-32362465 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1357-1523 |
| Cow position: | chr24:14377168-14377000 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1357-1523 |
| Cow position: | chr24:36712739-36712907 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1357-1523 |
| Cow position: | chr24:38640628-38640793 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 127, 11 |
| Conread position: | 1357-1524 |
| Cow position: | chr24:29154848-29155018 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 31, 117 |
| Conread position: | 1361-1522 |
| Cow position: | chr24:25438783-25438935 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 27, 57 |
| Conread position: | 1362-1520 |
| Cow position: | chr24:12698524-12698364 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1362-1521 |
| Cow position: | chr24:30895321-30895479 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 26, 34 |
| Conread position: | 1362-1522 |
| Cow position: | chr24:3850061-3850223 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1362-1522 |
| Cow position: | chr24:6326875-6326715 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 136 |
| Conread position: | 1362-1522 |
| Cow position: | chr24:12203872-12203712 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 26, 87 |
| Conread position: | 1362-1522 |
| Cow position: | chr24:13190665-13190827 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1362-1522 |
| Cow position: | chr24:14381796-14381634 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1363-1519 |
| Cow position: | chr24:33321391-33321233 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1363-1522 |
| Cow position: | chr24:9089585-9089420 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 125 |
| Conread position: | 1364-1522 |
| Cow position: | chr24:37198526-37198367 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 1365-1518 |
| Cow position: | chr24:17299431-17299278 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 23, 114 |
| Conread position: | 1366-1519 |
| Cow position: | chr24:14742747-14742898 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 114 |
| Conread position: | 1366-1521 |
| Cow position: | chr24:9072568-9072414 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 77 |
| Conread position: | 1368-1522 |
| Cow position: | chr24:15295325-15295481 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1370-1522 |
| Cow position: | chr24:1949991-1950145 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1375-1522 |
| Cow position: | chr24:8606834-8606983 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1376-1515 |
| Cow position: | chr24:40150870-40150730 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 12, 68 |
| Conread position: | 1376-1523 |
| Cow position: | chr24:17311032-17310887 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 12, 109 |
| Conread position: | 1377-1522 |
| Cow position: | chr24:6078938-6079085 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1386-1522 |
| Cow position: | chr24:34373109-34373246 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1387-1522 |
| Cow position: | chr24:33985993-33986129 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 1393-1521 |
| Cow position: | chr24:29085347-29085220 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
Show alignments to all cow chromosomes.