Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8024B18.5
        

               Conread position:
               1329-1522
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1331-1522
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               57, 16
               

               Conread position:
               1348-1522
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               40, 134
               

               Conread position:
               1349-1519
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               1349-1521
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               1349-1522
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               1349-1522
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               1349-1522
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               1349-1522
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               1349-1523
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               5, 51
               

               Conread position:
               1353-1505
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1353-1510
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1353-1515
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               81, 22
               

               Conread position:
               1353-1515
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               35, 76
               

               Conread position:
               1353-1518
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1353-1521
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               1353-1521
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               34, 141
               

               Conread position:
               1353-1521
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1353-1521
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1353-1521
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               35, 127
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               35, 130
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               35, 117
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               142
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               35, 91
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               34, 103
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               34, 15
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 132
               

               Conread position:
               1353-1523
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               35, 129
               

               Conread position:
               1353-1524
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1357-1515
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1357-1518
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1357-1522
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1357-1522
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1357-1522
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1357-1523
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1357-1523
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1357-1523
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               127, 11
               

               Conread position:
               1357-1524
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               31, 117
               

               Conread position:
               1361-1522
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               27, 57
               

               Conread position:
               1362-1520
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1362-1521
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               1362-1522
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1362-1522
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               26, 136
               

               Conread position:
               1362-1522
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               26, 87
               

               Conread position:
               1362-1522
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1362-1522
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1363-1519
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1363-1522
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 125
               

               Conread position:
               1364-1522
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               1365-1518
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               23, 114
               

               Conread position:
               1366-1519
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               22, 114
               

               Conread position:
               1366-1521
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 77
               

               Conread position:
               1368-1522
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1370-1522
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               1375-1522
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               1376-1515
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               12, 68
               

               Conread position:
               1376-1523
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               12, 109
               

               Conread position:
               1377-1522
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               1386-1522
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1387-1522
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1393-1521
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               91, 0
               
Show alignments to all cow chromosomes.