Cow genome map

Conread name: Ss1.1-Pig4-TMW8024B18.5

Conread position: 1326-1482
Cow position: chr27:16332406-16332250 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 125

Conread position: 1348-1470
Cow position: chr27:30536379-30536502 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 1348-1522
Cow position: chr27:26327448-26327624 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 39, 0

Conread position: 1349-1519
Cow position: chr27:28294472-28294302 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 93

Conread position: 1349-1523
Cow position: chr27:30034555-30034731 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 1350-1522
Cow position: chr27:23318528-23318359 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 141

Conread position: 1352-1521
Cow position: chr27:1535579-1535747 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 36, 56

Conread position: 1352-1522
Cow position: chr27:1031232-1031404 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 1353-1501
Cow position: chr27:4981771-4981921 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1509
Cow position: chr27:11488088-11488245 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 99

Conread position: 1353-1511
Cow position: chr27:9990820-9990660 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1511
Cow position: chr27:31267623-31267786 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 102

Conread position: 1353-1514
Cow position: chr27:166523-166359 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 106

Conread position: 1353-1515
Cow position: chr27:5913330-5913494 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1515
Cow position: chr27:15634940-15634777 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 34, 69

Conread position: 1353-1520
Cow position: chr27:4332333-4332164 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position: chr27:3233130-3232960 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position: chr27:10378324-10378494 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position: chr27:15273682-15273512 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 113, 31

Conread position: 1353-1521
Cow position: chr27:20809806-20809976 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position: chr27:27665402-27665572 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 103

Conread position: 1353-1522
Cow position: chr27:797216-797045 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr27:1520072-1520243 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr27:1676142-1675970 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr27:3991407-3991576 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 34, 69

Conread position: 1353-1522
Cow position: chr27:3995498-3995333 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 35, 103

Conread position: 1353-1522
Cow position: chr27:8200201-8200369 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 129, 20

Conread position: 1353-1522
Cow position: chr27:9332139-9332309 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 142

Conread position: 1353-1522
Cow position: chr27:12147252-12147081 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr27:12749424-12749595 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr27:13352688-13352859 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr27:13900288-13900459 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr27:15034701-15034530 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr27:16032000-16031835 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 35, 48

Conread position: 1353-1522
Cow position: chr27:18696732-18696903 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr27:22742991-22742824 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 130

Conread position: 1353-1522
Cow position: chr27:22798055-22797888 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position: chr27:27278114-27278278 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 139
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 35, 124

Conread position: 1353-1522
Cow position: chr27:27288892-27289063 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 30, 0

Conread position: 1353-1523
Cow position: chr27:15874649-15874485 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 125, 41

Conread position: 1353-1523
Cow position: chr27:30571218-30571384 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 31, 49

Conread position: 1353-1524
Cow position: chr27:21496765-21496936 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 35, 105

Conread position: 1354-1522
Cow position: chr27:24296849-24296679 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 138
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 29, 0

Conread position: 1354-1523
Cow position: chr27:11433524-11433686 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 14

Conread position: 1357-1522
Cow position: chr27:22722763-22722920 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 36, 101

Conread position: 1357-1522
Cow position: chr27:26553026-26552860 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 137
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 31, 103

Conread position: 1357-1522
Cow position: chr27:27193950-27193789 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 31, 23

Conread position: 1362-1521
Cow position: chr27:5991638-5991478 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 26, 135

Conread position: 1362-1522
Cow position: chr27:19524312-19524150 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 1362-1523
Cow position: chr27:8261060-8261223 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 21

Conread position: 1364-1507
Cow position: chr27:27730067-27729923 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 114, 0

Conread position: 1365-1514
Cow position: chr27:27235756-27235902 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 17, 64

Conread position: 1373-1513
Cow position: chr27:25884447-25884305 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 1377-1521
Cow position: chr27:29952683-29952829 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 32

Conread position: 1381-1522
Cow position: chr27:26855483-26855625 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 97, 0

Conread position: 1386-1515
Cow position: chr27:25797770-25797900 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 1386-1522
Cow position: chr27:20283388-20283250 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 1394-1522
Cow position: chr27:17404429-17404300 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 1395-1522
Cow position: chr27:28923439-28923569 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 22

Conread position: 1406-1521
Cow position: chr27:1082434-1082549 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.