Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8024B18.5
        

               Conread position:
               1326-1482
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               35, 125
               

               Conread position:
               1348-1470
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               1348-1522
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               1349-1519
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               39, 93
               

               Conread position:
               1349-1523
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               1350-1522
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               23, 141
               

               Conread position:
               1352-1521
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               36, 56
               

               Conread position:
               1352-1522
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               1353-1501
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1353-1509
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 99
               

               Conread position:
               1353-1511
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1353-1511
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               35, 102
               

               Conread position:
               1353-1514
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               35, 106
               

               Conread position:
               1353-1515
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1353-1515
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               34, 69
               

               Conread position:
               1353-1520
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1353-1521
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1353-1521
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1353-1521
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               113, 31
               

               Conread position:
               1353-1521
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1353-1521
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               34, 103
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               34, 69
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               35, 103
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               129, 20
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               34, 142
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               35, 48
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               29, 130
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               35, 130
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               35, 124
               

               Conread position:
               1353-1522
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1353-1523
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               125, 41
               

               Conread position:
               1353-1523
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               31, 49
               

               Conread position:
               1353-1524
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               35, 105
               

               Conread position:
               1354-1522
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1354-1523
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               34, 14
               

               Conread position:
               1357-1522
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               36, 101
               

               Conread position:
               1357-1522
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               31, 103
               

               Conread position:
               1357-1522
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               1362-1521
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               26, 135
               

               Conread position:
               1362-1522
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1362-1523
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               60, 21
               

               Conread position:
               1364-1507
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               1365-1514
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               17, 64
               

               Conread position:
               1373-1513
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1377-1521
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               1381-1522
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1386-1515
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1386-1522
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1394-1522
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1395-1522
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 22
               

               Conread position:
               1406-1521
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.