Cow genome map

Conread name: Ss1.1-Pig4-TMW8024B18.5

Conread position: 1329-1523
Cow position: chr28:10293849-10294045 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 29, 51

Conread position: 1345-1522
Cow position: chr28:21568340-21568515 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 147
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 43, 16

Conread position: 1348-1497
Cow position: chr28:15539281-15539133 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 72

Conread position: 1349-1511
Cow position: chr28:34084083-34083926 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 39, 17

Conread position: 1349-1518
Cow position: chr28:20266080-20265911 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 136, 23

Conread position: 1349-1522
Cow position: chr28:1215397-1215222 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1349-1522
Cow position: chr28:1955805-1955977 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 39, 135

Conread position: 1349-1522
Cow position: chr28:5939923-5940093 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 46

Conread position: 1349-1522
Cow position: chr28:10472089-10472258 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 38, 130

Conread position: 1349-1522
Cow position: chr28:14190245-14190073 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 135, 38

Conread position: 1349-1523
Cow position: chr28:7812888-7813061 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 112

Conread position: 1349-1524
Cow position: chr28:11788159-11787985 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 144

Conread position: 1350-1522
Cow position: chr28:29822622-29822796 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 1350-1523
Cow position: chr28:15685844-15686016 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 40, 131

Conread position: 1353-1476
Cow position: chr28:12152797-12152921 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1476
Cow position: chr28:12152995-12153119 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1476
Cow position: chr28:32789945-32789821 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1499
Cow position: chr28:32588591-32588443 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1515
Cow position: chr28:9181313-9181476 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 130, 0

Conread position: 1353-1515
Cow position: chr28:16596766-16596928 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1518
Cow position: chr28:23024627-23024787 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 131, 49

Conread position: 1353-1518
Cow position: chr28:25164044-25164204 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 129, 30

Conread position: 1353-1521
Cow position: chr28:5210559-5210729 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position: chr28:5338259-5338089 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1521
Cow position: chr28:8381486-8381654 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 34, 145

Conread position: 1353-1521
Cow position: chr28:8718534-8718364 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1521
Cow position: chr28:13462401-13462571 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 104

Conread position: 1353-1521
Cow position: chr28:33254760-33254930 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr28:785107-785274 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 38, 132

Conread position: 1353-1522
Cow position: chr28:1165446-1165277 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 34, 116

Conread position: 1353-1522
Cow position: chr28:1197562-1197729 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position: chr28:1384997-1384830 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 133

Conread position: 1353-1522
Cow position: chr28:1812500-1812330 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 42

Conread position: 1353-1522
Cow position: chr28:3189803-3189631 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 138
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr28:5112281-5112110 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr28:5636267-5636438 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr28:6536357-6536188 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position: chr28:6777567-6777396 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr28:6958670-6958841 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr28:7004445-7004616 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr28:7335430-7335597 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position: chr28:12407776-12407605 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 140
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 103

Conread position: 1353-1522
Cow position: chr28:14110508-14110679 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr28:15033641-15033470 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr28:15918084-15917914 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 131

Conread position: 1353-1522
Cow position: chr28:17390852-17391023 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 139
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr28:22230891-22230720 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr28:22258728-22258557 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr28:23310876-23310705 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr28:24591311-24591482 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr28:24885298-24885469 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr28:25849193-25849022 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr28:28928270-28928441 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr28:29037207-29037036 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr28:29760184-29760019 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 131, 41

Conread position: 1353-1522
Cow position: chr28:30097315-30097486 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chr28:34582361-34582532 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chr28:34596684-34596855 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1354-1522
Cow position: chr28:17664884-17664714 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 139
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 33, 0

Conread position: 1354-1522
Cow position: chr28:30534623-30534453 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1354-1523
Cow position: chr28:21378975-21379146 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 1357-1505
Cow position: chr28:7738636-7738786 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 1357-1521
Cow position: chr28:10616601-10616434 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 31, 0

Conread position: 1357-1522
Cow position: chr28:5749262-5749095 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 134
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 30, 0

Conread position: 1357-1522
Cow position: chr28:7743583-7743750 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 137
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 30, 0

Conread position: 1357-1522
Cow position: chr28:33639011-33639178 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 1357-1523
Cow position: chr28:11503780-11503612 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 31, 0

Conread position: 1362-1515
Cow position: chr28:4959080-4958932 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 95

Conread position: 1362-1522
Cow position: chr28:483261-483099 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position: chr28:2086911-2087073 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 25, 0

Conread position: 1362-1522
Cow position: chr28:2644165-2644327 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position: chr28:10302288-10302447 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 120

Conread position: 1362-1522
Cow position: chr28:15604061-15604224 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 0

Conread position: 1362-1522
Cow position: chr28:18517698-18517536 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 25, 94

Conread position: 1362-1522
Cow position: chr28:25562875-25563033 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 26, 51

Conread position: 1362-1522
Cow position: chr28:25702458-25702298 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 123

Conread position: 1362-1522
Cow position: chr28:28358331-28358175 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 26, 122

Conread position: 1362-1522
Cow position: chr28:28470469-28470631 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 28, 0

Conread position: 1362-1523
Cow position: chr28:30960065-30960223 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 25, 102

Conread position: 1362-1524
Cow position: chr28:34879590-34879429 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 25, 46

Conread position: 1363-1467
Cow position: chr28:3013519-3013415 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 25, 81

Conread position: 1364-1518
Cow position: chr28:22579189-22579343 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 128
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 120, 83

Conread position: 1365-1514
Cow position: chr28:28764386-28764235 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 1366-1510
Cow position: chr28:525597-525746 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 1366-1522
Cow position: chr28:34730364-34730522 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 1367-1520
Cow position: chr28:20935961-20935808 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 127
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 20

Conread position: 1368-1519
Cow position: chr28:11545021-11544866 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 1368-1521
Cow position: chr28:1507328-1507483 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 1383-1523
Cow position: chr28:5816122-5816263 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 95, 0

Conread position: 1386-1519
Cow position: chr28:25827859-25827724 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 1399-1522
Cow position: chr28:26420515-26420391 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 0

Show alignments to all cow chromosomes.