Cow genome map

Conread name: Ss1.1-Pig4-TMW8024B18.5

Conread position: 1333-1518
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 21, 62

Conread position: 1333-1523
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 1345-1522
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 19

Conread position: 1345-1523
Cow position:
Alignm length: 182
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 139, 0

Conread position: 1349-1515
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 1349-1518
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 85

Conread position: 1349-1521
Cow position:
Alignm length: 175
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 125

Conread position: 1349-1522
Cow position:
Alignm length: 176
Alignm identity: 137
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 41, 0

Conread position: 1349-1522
Cow position:
Alignm length: 177
Alignm identity: 139
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1349-1522
Cow position:
Alignm length: 175
Alignm identity: 137
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1349-1522
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1349-1523
Cow position:
Alignm length: 177
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 39, 52

Conread position: 1349-1523
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 129, 46

Conread position: 1349-1523
Cow position:
Alignm length: 179
Alignm identity: 146
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 39, 30

Conread position: 1349-1524
Cow position:
Alignm length: 178
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 74

Conread position: 1351-1522
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 32, 53

Conread position: 1351-1522
Cow position:
Alignm length: 174
Alignm identity: 138
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 32, 8

Conread position: 1353-1497
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 56

Conread position: 1353-1501
Cow position:
Alignm length: 154
Alignm identity: 124
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1506
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1507
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 1353-1512
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 124, 25

Conread position: 1353-1512
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 131, 36

Conread position: 1353-1515
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1515
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 1353-1519
Cow position:
Alignm length: 170
Alignm identity: 137
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1520
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 35, 142

Conread position: 1353-1521
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 103

Conread position: 1353-1521
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 35, 104

Conread position: 1353-1521
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 37, 104

Conread position: 1353-1521
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 35, 125

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 136
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 138
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 35, 98

Conread position: 1353-1521
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 104

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 140
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 43

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 34, 132

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 34, 84

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 39, 91

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 55

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 137
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 62

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 134
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 137
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position:
Alignm length: 173
Alignm identity: 139
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 35, 109

Conread position: 1353-1522
Cow position:
Alignm length: 174
Alignm identity: 138
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 34, 141

Conread position: 1353-1522
Cow position:
Alignm length: 173
Alignm identity: 137
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 77

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 104

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 134
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 129, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 128, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 35, 127

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 29, 18

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 141
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1523
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 20, 52

Conread position: 1353-1523
Cow position:
Alignm length: 173
Alignm identity: 139
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1523
Cow position:
Alignm length: 177
Alignm identity: 139
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 27, 0

Conread position: 1353-1524
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 35, 44

Conread position: 1354-1478
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 1354-1515
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 1355-1521
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 1355-1522
Cow position:
Alignm length: 170
Alignm identity: 134
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 32, 7

Conread position: 1357-1514
Cow position:
Alignm length: 160
Alignm identity: 126
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 31, 120

Conread position: 1357-1514
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 1357-1522
Cow position:
Alignm length: 168
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 16, 128

Conread position: 1357-1523
Cow position:
Alignm length: 169
Alignm identity: 134
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 110

Conread position: 1361-1522
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 6, 123

Conread position: 1362-1505
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1519
Cow position:
Alignm length: 159
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 120, 27

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 134
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 25, 0

Conread position: 1362-1522
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 25, 123

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 130
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 1363-1522
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 1363-1522
Cow position:
Alignm length: 164
Alignm identity: 136
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 24, 0

Conread position: 1363-1522
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 1364-1522
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 142

Conread position: 1364-1522
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 1365-1499
Cow position:
Alignm length: 138
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 1365-1515
Cow position:
Alignm length: 153
Alignm identity: 124
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 23, 46

Conread position: 1365-1522
Cow position:
Alignm length: 159
Alignm identity: 126
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 120

Conread position: 1366-1509
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 43

Conread position: 1366-1515
Cow position:
Alignm length: 151
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 118, 0

Conread position: 1366-1522
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 22, 117

Conread position: 1367-1523
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 1368-1522
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 7, 82

Conread position: 1369-1521
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 1370-1503
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1374-1522
Cow position:
Alignm length: 151
Alignm identity: 118
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 1383-1521
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 100, 24

Conread position: 1385-1521
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 1385-1523
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 18, 0

Conread position: 1386-1515
Cow position:
Alignm length: 131
Alignm identity: 105
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 1386-1522
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 1386-1523
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 98, 29

Conread position: 1387-1522
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 1389-1518
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 1389-1523
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 1394-1521
Cow position:
Alignm length: 129
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 1400-1523
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 39

Show alignments to all cow chromosomes.