Cow genome map

Conread name: Ss1.1-Pig4-TMW8024B18.5

Conread position: 1027-1522
Cow position:
Alignm length: 497
Alignm identity: 129
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 361, 456

Conread position: 1329-1519
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 14, 131

Conread position: 1329-1522
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 155, 33

Conread position: 1345-1515
Cow position:
Alignm length: 172
Alignm identity: 138
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 139, 19

Conread position: 1349-1467
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1349-1507
Cow position:
Alignm length: 161
Alignm identity: 129
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 0

Conread position: 1349-1521
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 1349-1522
Cow position:
Alignm length: 176
Alignm identity: 141
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1349-1522
Cow position:
Alignm length: 176
Alignm identity: 137
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 39, 0

Conread position: 1349-1522
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 39, 133

Conread position: 1349-1523
Cow position:
Alignm length: 188
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 1350-1522
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 1351-1522
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 133, 15

Conread position: 1352-1522
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 1353-1490
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1497
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 19

Conread position: 1353-1499
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1501
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 1353-1507
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 34, 129

Conread position: 1353-1510
Cow position:
Alignm length: 160
Alignm identity: 128
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1512
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1512
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 103

Conread position: 1353-1514
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1515
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 1353-1515
Cow position:
Alignm length: 168
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 34, 132

Conread position: 1353-1518
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 8

Conread position: 1353-1518
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1521
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 34, 57

Conread position: 1353-1521
Cow position:
Alignm length: 171
Alignm identity: 136
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 32, 0

Conread position: 1353-1522
Cow position:
Alignm length: 173
Alignm identity: 137
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 34, 132

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 91

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 91

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 90

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 34, 145

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 35, 125

Conread position: 1353-1522
Cow position:
Alignm length: 173
Alignm identity: 135
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 34, 65

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 179
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 35, 117

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 137
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 137
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 144
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 34, 131

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 140
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 35, 64

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 137
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 174
Alignm identity: 135
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 74

Conread position: 1353-1522
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 129, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 133
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 171
Alignm identity: 133
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 140
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 137
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1523
Cow position:
Alignm length: 173
Alignm identity: 138
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1523
Cow position:
Alignm length: 173
Alignm identity: 142
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 35, 91

Conread position: 1353-1523
Cow position:
Alignm length: 173
Alignm identity: 139
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1523
Cow position:
Alignm length: 173
Alignm identity: 135
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1523
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 14

Conread position: 1353-1523
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 1354-1502
Cow position:
Alignm length: 151
Alignm identity: 120
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 1354-1502
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 1354-1522
Cow position:
Alignm length: 171
Alignm identity: 136
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 33, 147

Conread position: 1355-1523
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 33, 0

Conread position: 1357-1501
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 1357-1514
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 61

Conread position: 1358-1522
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 1358-1522
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 15

Conread position: 1362-1509
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 120, 56

Conread position: 1362-1512
Cow position:
Alignm length: 153
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 1362-1515
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 1362-1518
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 122, 73

Conread position: 1362-1521
Cow position:
Alignm length: 162
Alignm identity: 131
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1521
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 123

Conread position: 1362-1521
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 130
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position:
Alignm length: 163
Alignm identity: 131
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 0

Conread position: 1362-1522
Cow position:
Alignm length: 164
Alignm identity: 134
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 26, 94

Conread position: 1362-1522
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 26, 47

Conread position: 1362-1523
Cow position:
Alignm length: 164
Alignm identity: 133
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1523
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 119

Conread position: 1363-1521
Cow position:
Alignm length: 161
Alignm identity: 128
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 1363-1522
Cow position:
Alignm length: 162
Alignm identity: 129
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 1363-1522
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1363-1522
Cow position:
Alignm length: 162
Alignm identity: 127
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 1364-1501
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 1364-1515
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 1364-1518
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 120, 41

Conread position: 1364-1519
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 146

Conread position: 1364-1519
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 1364-1522
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 120

Conread position: 1365-1514
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 120

Conread position: 1365-1520
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 1365-1522
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 57

Conread position: 1365-1522
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 1366-1502
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 1366-1518
Cow position:
Alignm length: 155
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 1366-1522
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 1367-1522
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 20, 107

Conread position: 1367-1522
Cow position:
Alignm length: 158
Alignm identity: 125
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 1371-1522
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 1373-1505
Cow position:
Alignm length: 136
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 84

Conread position: 1374-1522
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 1386-1522
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 1386-1522
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 1388-1522
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 96, 0

Conread position: 1389-1507
Cow position:
Alignm length: 120
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 1389-1522
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 1394-1522
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 65, 61

Conread position: 1397-1518
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 87, 65

Conread position: 1397-1522
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 82, 91

Conread position: 1398-1522
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 1408-1522
Cow position:
Alignm length: 116
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 0

Show alignments to all cow chromosomes.