Cow genome map

Conread name: Ss1.1-Pig4-TMW8024B18.5

Conread position: 1191-1521
Cow position: chrX:5393169-5392804 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 16, 29

Conread position: 1328-1522
Cow position: chrX:15569734-15569537 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 33, 125

Conread position: 1331-1522
Cow position: chrX:26623629-26623428 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 1345-1510
Cow position: chrX:4742848-4742680 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 1345-1519
Cow position: chrX:41595589-41595419 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 43, 16

Conread position: 1348-1521
Cow position: chrX:24444870-24444694 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 1349-1520
Cow position: chrX:28648643-28648475 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 5, 136

Conread position: 1349-1521
Cow position: chrX:17890746-17890917 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 39, 125

Conread position: 1349-1521
Cow position: chrX:21388786-21388958 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 38, 24

Conread position: 1349-1521
Cow position: chrX:21413801-21413972 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 24

Conread position: 1349-1521
Cow position: chrX:21591489-21591666 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 39, 0

Conread position: 1349-1521
Cow position: chrX:21751458-21751284 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1349-1522
Cow position: chrX:731355-731184 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 147

Conread position: 1349-1523
Cow position: chrX:31727676-31727852 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 39, 0

Conread position: 1352-1519
Cow position: chrX:47215621-47215452 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 35, 147

Conread position: 1353-1477
Cow position: chrX:16036229-16036104 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1488
Cow position: chrX:1941154-1941018 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1508
Cow position: chrX:2381706-2381862 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 29, 148

Conread position: 1353-1510
Cow position: chrX:16710170-16710329 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1510
Cow position: chrX:27424079-27423920 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1513
Cow position: chrX:28520394-28520235 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 34, 23

Conread position: 1353-1514
Cow position: chrX:22590635-22590471 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 1353-1515
Cow position: chrX:2560741-2560577 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1515
Cow position: chrX:5321508-5321344 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1515
Cow position: chrX:16809680-16809516 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1515
Cow position: chrX:23453848-23453684 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 132
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1515
Cow position: chrX:39696974-39697136 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 118

Conread position: 1353-1517
Cow position: chrX:15143995-15143831 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 125, 33

Conread position: 1353-1518
Cow position: chrX:6247974-6247810 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 26

Conread position: 1353-1518
Cow position: chrX:21628175-21628010 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 34, 84

Conread position: 1353-1519
Cow position: chrX:32328414-32328586 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 1353-1521
Cow position: chrX:2480423-2480254 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 34, 26

Conread position: 1353-1521
Cow position: chrX:16360903-16360733 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1521
Cow position: chrX:20357796-20357626 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1521
Cow position: chrX:23279231-23279401 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position: chrX:27317434-27317604 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1521
Cow position: chrX:27591813-27591647 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 34, 73

Conread position: 1353-1521
Cow position: chrX:30167871-30167701 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1521
Cow position: chrX:36536526-36536356 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:2047295-2047461 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 132

Conread position: 1353-1522
Cow position: chrX:2273507-2273677 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 84

Conread position: 1353-1522
Cow position: chrX:2578630-2578796 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position: chrX:3082929-3082763 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position: chrX:3143042-3143213 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:3419014-3418843 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:4906787-4906618 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 34, 128

Conread position: 1353-1522
Cow position: chrX:5281575-5281408 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 35, 127

Conread position: 1353-1522
Cow position: chrX:5333224-5333057 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position: chrX:5355615-5355444 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:5360213-5360384 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:5366791-5366620 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:5865346-5865516 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 29, 16

Conread position: 1353-1522
Cow position: chrX:6580148-6580319 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:7119696-7119867 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 1353-1522
Cow position: chrX:7552602-7552431 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 140
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chrX:8481659-8481826 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 64

Conread position: 1353-1522
Cow position: chrX:8961618-8961447 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:9010540-9010708 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 68

Conread position: 1353-1522
Cow position: chrX:9094850-9095021 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chrX:9127289-9127460 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:10529583-10529412 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:10867647-10867476 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 140
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:11147135-11146964 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:11462789-11462618 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:12308559-12308388 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:12359094-12359265 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:12464212-12464383 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chrX:12652287-12652116 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:12667125-12666954 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:13243862-13244033 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:13407075-13406910 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 133, 25

Conread position: 1353-1522
Cow position: chrX:14461522-14461693 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:14597060-14597231 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:15040339-15040168 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chrX:15122951-15122787 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 42

Conread position: 1353-1522
Cow position: chrX:15177230-15177059 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:15261413-15261242 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:16045175-16045346 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:16701888-16702059 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chrX:16804935-16804764 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:18221623-18221790 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 35, 125

Conread position: 1353-1522
Cow position: chrX:18657597-18657430 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 130

Conread position: 1353-1522
Cow position: chrX:19397980-19398151 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:19474944-19474774 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 136

Conread position: 1353-1522
Cow position: chrX:19607880-19608051 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:20725177-20725348 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 139
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 104

Conread position: 1353-1522
Cow position: chrX:21225684-21225855 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chrX:21766836-21767007 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:21831719-21831890 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 30, 0

Conread position: 1353-1522
Cow position: chrX:22565481-22565310 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:22810099-22810270 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chrX:23394812-23394981 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 34, 132

Conread position: 1353-1522
Cow position: chrX:23573597-23573431 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 72

Conread position: 1353-1522
Cow position: chrX:24412232-24412404 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:24468916-24468748 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 35, 125

Conread position: 1353-1522
Cow position: chrX:24730854-24731025 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:26274165-26274336 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:26443756-26443922 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 1353-1522
Cow position: chrX:26756436-26756265 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chrX:27304147-27304317 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:27978613-27978447 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 132

Conread position: 1353-1522
Cow position: chrX:27984148-27983977 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:28625422-28625251 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chrX:29095111-29094940 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:29171577-29171406 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:30013199-30013370 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:30054265-30054092 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:30090811-30090648 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 62

Conread position: 1353-1522
Cow position: chrX:30229907-30229737 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 69

Conread position: 1353-1522
Cow position: chrX:30437111-30437282 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:31200765-31200932 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 34, 42

Conread position: 1353-1522
Cow position: chrX:31494940-31495111 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:32064958-32064793 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 29, 131

Conread position: 1353-1522
Cow position: chrX:34093623-34093452 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:35532063-35532234 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:37851349-37851520 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 1353-1522
Cow position: chrX:38149802-38149974 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 1353-1522
Cow position: chrX:39712757-39712928 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:41152999-41153186 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1522
Cow position: chrX:43437700-43437529 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1522
Cow position: chrX:45417395-45417224 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1523
Cow position: chrX:4766914-4767081 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 138
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 144

Conread position: 1353-1523
Cow position: chrX:16022969-16023141 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 1353-1523
Cow position: chrX:17665592-17665420 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 143
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 0

Conread position: 1353-1523
Cow position: chrX:28556586-28556757 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 34, 157

Conread position: 1353-1523
Cow position: chrX:35887297-35887467 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 146
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 35, 80

Conread position: 1353-1523
Cow position: chrX:36691243-36691069 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 1354-1498
Cow position: chrX:47381446-47381303 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 68

Conread position: 1354-1522
Cow position: chrX:47383672-47383504 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 68

Conread position: 1357-1482
Cow position: chrX:33828092-33828217 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 94

Conread position: 1357-1521
Cow position: chrX:6280587-6280419 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 1357-1522
Cow position: chrX:1549188-1549356 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 136
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 30, 0

Conread position: 1357-1522
Cow position: chrX:13431961-13431797 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 31, 95

Conread position: 1357-1522
Cow position: chrX:22818284-22818449 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 30, 137

Conread position: 1357-1522
Cow position: chrX:30181717-30181550 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 1357-1523
Cow position: chrX:5640668-5640500 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 1357-1523
Cow position: chrX:22126560-22126398 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 60

Conread position: 1357-1523
Cow position: chrX:23388339-23388172 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 136
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 30, 0

Conread position: 1357-1523
Cow position: chrX:31340457-31340288 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 1358-1511
Cow position: chrX:35938815-35938656 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 1358-1522
Cow position: chrX:3466149-3465987 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 30, 125

Conread position: 1362-1507
Cow position: chrX:22616968-22616820 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1518
Cow position: chrX:29791865-29791708 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 26, 71

Conread position: 1362-1521
Cow position: chrX:12345151-12345312 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 132
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1521
Cow position: chrX:39561718-39561558 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 121, 0

Conread position: 1362-1522
Cow position: chrX:2814264-2814102 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position: chrX:3360043-3360199 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 93

Conread position: 1362-1522
Cow position: chrX:7095712-7095874 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position: chrX:7754119-7754281 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position: chrX:13072233-13072071 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position: chrX:13092793-13092631 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position: chrX:15978739-15978577 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position: chrX:16781498-16781660 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position: chrX:20034193-20034031 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position: chrX:21492381-21492544 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 1362-1522
Cow position: chrX:23021530-23021694 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 1362-1522
Cow position: chrX:24445995-24445833 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position: chrX:28587194-28587356 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position: chrX:28754124-28753962 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position: chrX:29911547-29911709 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position: chrX:30136180-30136345 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 99

Conread position: 1362-1522
Cow position: chrX:36194115-36194277 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position: chrX:37814363-37814525 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 1362-1522
Cow position: chrX:47359613-47359461 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 1362-1523
Cow position: chrX:21647062-21646903 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 88

Conread position: 1362-1523
Cow position: chrX:45375818-45375655 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 28, 0

Conread position: 1363-1518
Cow position: chrX:2145188-2145344 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 1363-1522
Cow position: chrX:24770641-24770480 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 1363-1522
Cow position: chrX:29098641-29098801 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 1363-1523
Cow position: chrX:30137642-30137479 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 1364-1513
Cow position: chrX:41886783-41886632 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 1364-1515
Cow position: chrX:20651658-20651815 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 1364-1518
Cow position: chrX:10301110-10300957 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 127
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 116

Conread position: 1364-1518
Cow position: chrX:36838935-36839092 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 131
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 23, 0

Conread position: 1364-1522
Cow position: chrX:29759235-29759075 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 1365-1522
Cow position: chrX:20741411-20741253 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 23, 71

Conread position: 1365-1523
Cow position: chrX:26443031-26442872 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 134
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 23, 31

Conread position: 1366-1499
Cow position: chrX:16277898-16278033 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1366-1523
Cow position: chrX:10413742-10413583 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 28, 56

Conread position: 1367-1477
Cow position: chrX:35022691-35022802 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 96
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 1368-1522
Cow position: chrX:21581661-21581817 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 1369-1521
Cow position: chrX:38963492-38963340 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 114

Conread position: 1370-1521
Cow position: chrX:16855127-16854974 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 1376-1515
Cow position: chrX:24322601-24322460 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 1378-1522
Cow position: chrX:18951502-18951356 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 1378-1522
Cow position: chrX:28606852-28606708 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 80

Conread position: 1381-1522
Cow position: chrX:9534902-9535042 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 79, 62

Conread position: 1381-1522
Cow position: chrX:9835811-9835953 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 1386-1521
Cow position: chrX:30164992-30164855 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 1386-1522
Cow position: chrX:37135718-37135581 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 96, 0

Conread position: 1389-1522
Cow position: chrX:6196791-6196657 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 0

Show alignments to all cow chromosomes.