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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8024E12.3
        

               
Conread position:
               
547-958
               

               
Cow position:
               
chr23:13520264-13520663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 7
               

               
Conread position:
               
551-941
               

               
Cow position:
               
chr23:5451147-5451524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
159, 7
               

               
Conread position:
               
555-937
               

               
Cow position:
               
chr23:26949018-26949389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 7
               

               
Conread position:
               
557-949
               

               
Cow position:
               
chr23:36244171-36244555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
562-941
               

               
Cow position:
               
chr23:16583088-16582704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 7
               

               
Conread position:
               
565-808
               

               
Cow position:
               
chr23:1921393-1921155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
565-949
               

               
Cow position:
               
chr23:14164572-14164166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
8, 60
               

               
Conread position:
               
566-874
               

               
Cow position:
               
chr23:18402457-18402151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
156, 127
               

               
Conread position:
               
566-925
               

               
Cow position:
               
chr23:9599331-9599674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
149, 23
               

               
Conread position:
               
566-937
               

               
Cow position:
               
chr23:4579205-4578836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
566-941
               

               
Cow position:
               
chr23:15742927-15743293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
164, 23
               

               
Conread position:
               
566-951
               

               
Cow position:
               
chr23:39778241-39778609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 23
               

               
Conread position:
               
569-951
               

               
Cow position:
               
chr23:1883229-1883604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
569-951
               

               
Cow position:
               
chr23:5617412-5617789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
569-959
               

               
Cow position:
               
chr23:3247419-3247809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
570-960
               

               
Cow position:
               
chr23:12470775-12471151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
572-937
               

               
Cow position:
               
chr23:4968687-4968333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
15, 140
               

               
Conread position:
               
572-941
               

               
Cow position:
               
chr23:33601691-33601331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
20, 135
               

               
Conread position:
               
573-959
               

               
Cow position:
               
chr23:22414453-22414089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 21
               

               
Conread position:
               
574-705
               

               
Cow position:
               
chr23:33233077-33232939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
574-766
               

               
Cow position:
               
chr23:1670744-1670932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
574-941
               

               
Cow position:
               
chr23:4996260-4995894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
74, 100
               

               
Conread position:
               
574-960
               

               
Cow position:
               
chr23:16246575-16246961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
574-960
               

               
Cow position:
               
chr23:20744752-20744363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
575-940
               

               
Cow position:
               
chr23:5162266-5162643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 184
               

               
Conread position:
               
576-766
               

               
Cow position:
               
chr23:26942281-26942472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
576-820
               

               
Cow position:
               
chr23:27996978-27997212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
156, 74
               

               
Conread position:
               
576-863
               

               
Cow position:
               
chr23:6592862-6592579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
16, 139
               

               
Conread position:
               
576-865
               

               
Cow position:
               
chr23:24867147-24867438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
576-903
               

               
Cow position:
               
chr23:7835649-7835320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
147, 130
               

               
Conread position:
               
576-930
               

               
Cow position:
               
chr23:21336647-21336278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
576-941
               

               
Cow position:
               
chr23:4726631-4726994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 12
               

               
Conread position:
               
576-950
               

               
Cow position:
               
chr23:3282272-3281898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
141, 9
               

               
Conread position:
               
576-951
               

               
Cow position:
               
chr23:1942570-1942946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
576-956
               

               
Cow position:
               
chr23:29626256-29626645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
576-956
               

               
Cow position:
               
chr23:39049580-39049219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
154, 9
               

               
Conread position:
               
577-736
               

               
Cow position:
               
chr23:38854893-38854735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
577-816
               

               
Cow position:
               
chr23:25378496-25378726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 126
               

               
Conread position:
               
577-848
               

               
Cow position:
               
chr23:40781168-40781441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
577-855
               

               
Cow position:
               
chr23:16700200-16699923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
15, 133
               

               
Conread position:
               
577-869
               

               
Cow position:
               
chr23:7574790-7574492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
15, 84
               

               
Conread position:
               
577-903
               

               
Cow position:
               
chr23:5723385-5723701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
15, 146
               

               
Conread position:
               
577-944
               

               
Cow position:
               
chr23:33711604-33711967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 51
               

               
Conread position:
               
577-948
               

               
Cow position:
               
chr23:26795062-26794704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
577-951
               

               
Cow position:
               
chr23:9874513-9874872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
577-951
               

               
Cow position:
               
chr23:40778108-40778475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
577-958
               

               
Cow position:
               
chr23:24704123-24704501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 200
               

               
Conread position:
               
579-855
               

               
Cow position:
               
chr23:19774618-19774887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
579-945
               

               
Cow position:
               
chr23:1583375-1583723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
9, 45
               

               
Conread position:
               
579-958
               

               
Cow position:
               
chr23:41348801-41348408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 295
               

               
Conread position:
               
581-823
               

               
Cow position:
               
chr23:4980699-4980460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
581-831
               

               
Cow position:
               
chr23:3262650-3262403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
11, 124
               

               
Conread position:
               
581-848
               

               
Cow position:
               
chr23:11045333-11045598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
114, 42
               

               
Conread position:
               
581-855
               

               
Cow position:
               
chr23:13599191-13599459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
11, 44
               

               
Conread position:
               
581-937
               

               
Cow position:
               
chr23:9734260-9734618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
11, 119
               

               
Conread position:
               
581-941
               

               
Cow position:
               
chr23:39752964-39753303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
581-959
               

               
Cow position:
               
chr23:28206457-28206818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
327, 65
               

               
Conread position:
               
584-846
               

               
Cow position:
               
chr23:40844503-40844759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
139, 59
               

               
Conread position:
               
585-831
               

               
Cow position:
               
chr23:4562736-4562980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
137, 122
               

               
Conread position:
               
585-860
               

               
Cow position:
               
chr23:40648873-40648607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
117, 38
               

               
Conread position:
               
585-933
               

               
Cow position:
               
chr23:34611619-34611302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
585-941
               

               
Cow position:
               
chr23:1636129-1636470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
70, 120
               

               
Conread position:
               
585-941
               

               
Cow position:
               
chr23:3967700-3967352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
183, 38
               

               
Conread position:
               
585-941
               

               
Cow position:
               
chr23:5426282-5426639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 38
               

               
Conread position:
               
585-941
               

               
Cow position:
               
chr23:18286049-18286385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
585-946
               

               
Cow position:
               
chr23:24509553-24509891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
585-948
               

               
Cow position:
               
chr23:26779818-26779465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
585-949
               

               
Cow position:
               
chr23:3245071-3244705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 126
               

               
Conread position:
               
585-950
               

               
Cow position:
               
chr23:26986420-26986062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 38
               

               
Conread position:
               
586-941
               

               
Cow position:
               
chr23:2282322-2281986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
588-847
               

               
Cow position:
               
chr23:26050890-26051149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
114, 36
               

               
Conread position:
               
590-951
               

               
Cow position:
               
chr23:29801290-29801647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
134, 21
               

               
Conread position:
               
591-706
               

               
Cow position:
               
chr23:35254381-35254266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
107, 43
               

               
Conread position:
               
591-735
               

               
Cow position:
               
chr23:10014396-10014538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
111, 33
               

               
Conread position:
               
591-752
               

               
Cow position:
               
chr23:39028637-39028796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
591-757
               

               
Cow position:
               
chr23:32961510-32961342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
591-761
               

               
Cow position:
               
chr23:23113886-23114057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 123
               

               
Conread position:
               
591-766
               

               
Cow position:
               
chr23:20057009-20056834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
111, 32
               

               
Conread position:
               
591-767
               

               
Cow position:
               
chr23:16664709-16664539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
591-811
               

               
Cow position:
               
chr23:6367466-6367685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
591-816
               

               
Cow position:
               
chr23:18322559-18322347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
591-816
               

               
Cow position:
               
chr23:19371213-19370995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
591-832
               

               
Cow position:
               
chr23:39806727-39806965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
115, 25
               

               
Conread position:
               
591-841
               

               
Cow position:
               
chr23:17404696-17404943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
130, 32
               

               
Conread position:
               
591-841
               

               
Cow position:
               
chr23:36309278-36309525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
131, 33
               

               
Conread position:
               
591-842
               

               
Cow position:
               
chr23:11473647-11473399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
130, 32
               

               
Conread position:
               
591-842
               

               
Cow position:
               
chr23:24984313-24984064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
591-842
               

               
Cow position:
               
chr23:27544686-27544933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
131, 38
               

               
Conread position:
               
591-854
               

               
Cow position:
               
chr23:1767687-1767948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 19
               

               
Conread position:
               
591-855
               

               
Cow position:
               
chr23:2316653-2316906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
35, 105
               

               
Conread position:
               
591-855
               

               
Cow position:
               
chr23:3434053-3433794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
591-860
               

               
Cow position:
               
chr23:6995121-6994859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
131, 33
               

               
Conread position:
               
591-862
               

               
Cow position:
               
chr23:1742213-1742479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
131, 115
               

               
Conread position:
               
591-862
               

               
Cow position:
               
chr23:29034174-29034440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
134, 33
               

               
Conread position:
               
591-867
               

               
Cow position:
               
chr23:18296664-18296938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
29, 131
               

               
Conread position:
               
591-869
               

               
Cow position:
               
chr23:10554151-10553876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
128, 33
               

               
Conread position:
               
591-874
               

               
Cow position:
               
chr23:1923979-1923700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
591-874
               

               
Cow position:
               
chr23:4104262-4104535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
273, 11
               

               
Conread position:
               
591-874
               

               
Cow position:
               
chr23:4966677-4966956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
126, 52
               

               
Conread position:
               
591-875
               

               
Cow position:
               
chr23:4529026-4528738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
75, 239
               

               
Conread position:
               
591-875
               

               
Cow position:
               
chr23:21502780-21502492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
125, 32
               

               
Conread position:
               
591-875
               

               
Cow position:
               
chr23:33717683-33717404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
132, 32
               

               
Conread position:
               
591-879
               

               
Cow position:
               
chr23:9268450-9268720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
591-890
               

               
Cow position:
               
chr23:21764775-21765067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
109, 32
               

               
Conread position:
               
591-890
               

               
Cow position:
               
chr23:33622295-33621996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 70
               

               
Conread position:
               
591-892
               

               
Cow position:
               
chr23:5540019-5540298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
591-918
               

               
Cow position:
               
chr23:16631125-16631451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
31, 49
               

               
Conread position:
               
591-925
               

               
Cow position:
               
chr23:21452874-21452546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
310, 32
               

               
Conread position:
               
591-927
               

               
Cow position:
               
chr23:4972640-4972953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
591-928
               

               
Cow position:
               
chr23:26632660-26632989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
591-929
               

               
Cow position:
               
chr23:18416191-18415867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
35, 105
               

               
Conread position:
               
591-930
               

               
Cow position:
               
chr23:349870-349530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
28, 126
               

               
Conread position:
               
591-930
               

               
Cow position:
               
chr23:11129091-11129427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
591-935
               

               
Cow position:
               
chr23:1585528-1585203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
591-936
               

               
Cow position:
               
chr23:344317-343981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
258, 33
               

               
Conread position:
               
591-937
               

               
Cow position:
               
chr23:7845150-7845486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
591-937
               

               
Cow position:
               
chr23:20248839-20248496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
132, 104
               

               
Conread position:
               
591-937
               

               
Cow position:
               
chr23:22804581-22804920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
45, 121
               

               
Conread position:
               
591-939
               

               
Cow position:
               
chr23:3191271-3190927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 112
               

               
Conread position:
               
591-941
               

               
Cow position:
               
chr23:534086-534428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 32
               

               
Conread position:
               
591-941
               

               
Cow position:
               
chr23:1189043-1188718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
591-941
               

               
Cow position:
               
chr23:3409047-3408684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
114, 32
               

               
Conread position:
               
591-941
               

               
Cow position:
               
chr23:5870325-5869988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
32, 95
               

               
Conread position:
               
591-941
               

               
Cow position:
               
chr23:12334066-12334424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
96, 16
               

               
Conread position:
               
591-941
               

               
Cow position:
               
chr23:29345899-29345575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
139, 34
               

               
Conread position:
               
591-941
               

               
Cow position:
               
chr23:33153332-33152993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
591-941
               

               
Cow position:
               
chr23:37065698-37066058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
591-941
               

               
Cow position:
               
chr23:38455325-38454961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 124
               

               
Conread position:
               
591-945
               

               
Cow position:
               
chr23:34315108-34314746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
32, 118
               

               
Conread position:
               
591-947
               

               
Cow position:
               
chr23:12091502-12091152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
130, 104
               

               
Conread position:
               
591-948
               

               
Cow position:
               
chr23:5436787-5436431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
591-949
               

               
Cow position:
               
chr23:1655747-1656104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 119
               

               
Conread position:
               
591-949
               

               
Cow position:
               
chr23:24930212-24929859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
35, 54
               

               
Conread position:
               
591-949
               

               
Cow position:
               
chr23:25864830-25864483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
161, 35
               

               
Conread position:
               
591-949
               

               
Cow position:
               
chr23:34416418-34416778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
35, 108
               

               
Conread position:
               
591-949
               

               
Cow position:
               
chr23:36018003-36018375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
35, 126
               

               
Conread position:
               
591-949
               

               
Cow position:
               
chr23:39083310-39083663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
131, 64
               

               
Conread position:
               
591-950
               

               
Cow position:
               
chr23:7175477-7175828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
35, 54
               

               
Conread position:
               
591-951
               

               
Cow position:
               
chr23:37894-38244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
139, 69
               

               
Conread position:
               
591-951
               

               
Cow position:
               
chr23:1337444-1337095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
591-951
               

               
Cow position:
               
chr23:33569996-33570344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
95, 16
               

               
Conread position:
               
591-951
               

               
Cow position:
               
chr23:34356494-34356854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
35, 113
               

               
Conread position:
               
591-953
               

               
Cow position:
               
chr23:1776772-1776440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
591-955
               

               
Cow position:
               
chr23:8293362-8293726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
591-956
               

               
Cow position:
               
chr23:1885315-1884957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 113
               

               
Conread position:
               
591-956
               

               
Cow position:
               
chr23:40443726-40444076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
139, 58
               

               
Conread position:
               
591-958
               

               
Cow position:
               
chr23:799810-799446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
177, 55
               

               
Conread position:
               
591-958
               

               
Cow position:
               
chr23:12363761-12363396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 32
               

               
Conread position:
               
591-958
               

               
Cow position:
               
chr23:38973699-38974054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
36, 132
               

               
Conread position:
               
591-959
               

               
Cow position:
               
chr23:187035-187399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 33
               

               
Conread position:
               
591-959
               

               
Cow position:
               
chr23:2501996-2501636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 32
               

               
Conread position:
               
591-959
               

               
Cow position:
               
chr23:18902190-18901846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
591-959
               

               
Cow position:
               
chr23:32480179-32479795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
49, 284
               

               
Conread position:
               
591-959
               

               
Cow position:
               
chr23:35239203-35239569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 14
               

               
Conread position:
               
592-704
               

               
Cow position:
               
chr23:21343389-21343281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
592-720
               

               
Cow position:
               
chr23:22530556-22530430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
83, 31
               

               
Conread position:
               
592-761
               

               
Cow position:
               
chr23:2055564-2055729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
131, 31
               

               
Conread position:
               
592-809
               

               
Cow position:
               
chr23:4329823-4329602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
592-896
               

               
Cow position:
               
chr23:3727540-3727226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
36, 163
               

               
Conread position:
               
592-930
               

               
Cow position:
               
chr23:36726053-36725723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
592-935
               

               
Cow position:
               
chr23:22496707-22496361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
592-941
               

               
Cow position:
               
chr23:29786492-29786141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
592-949
               

               
Cow position:
               
chr23:4810608-4810949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
34, 106
               

               
Conread position:
               
592-949
               

               
Cow position:
               
chr23:8837830-8837480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
34, 88
               

               
Conread position:
               
592-949
               

               
Cow position:
               
chr23:10085325-10084974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
31, 10
               

               
Conread position:
               
592-949
               

               
Cow position:
               
chr23:19221794-19221427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 113
               

               
Conread position:
               
592-949
               

               
Cow position:
               
chr23:30585800-30585439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
104, 24
               

               
Conread position:
               
592-949
               

               
Cow position:
               
chr23:31601596-31601240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
34, 100
               

               
Conread position:
               
592-950
               

               
Cow position:
               
chr23:29521331-29521685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
592-954
               

               
Cow position:
               
chr23:16690199-16689850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
592-959
               

               
Cow position:
               
chr23:25675837-25675477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
131, 37
               

               
Conread position:
               
593-734
               

               
Cow position:
               
chr23:1068454-1068318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
593-752
               

               
Cow position:
               
chr23:3955269-3955434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
593-823
               

               
Cow position:
               
chr23:1647478-1647703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
593-838
               

               
Cow position:
               
chr23:12050224-12050458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
593-875
               

               
Cow position:
               
chr23:11380394-11380111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
139, 109
               

               
Conread position:
               
593-893
               

               
Cow position:
               
chr23:18698169-18697866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 117
               

               
Conread position:
               
593-941
               

               
Cow position:
               
chr23:39813364-39813704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 33
               

               
Conread position:
               
593-949
               

               
Cow position:
               
chr23:16847825-16848183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 91
               

               
Conread position:
               
593-951
               

               
Cow position:
               
chr23:15287271-15286939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
129, 68
               

               
Conread position:
               
594-838
               

               
Cow position:
               
chr23:23409597-23409835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 114
               

               
Conread position:
               
594-878
               

               
Cow position:
               
chr23:21445976-21446260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 14
               

               
Conread position:
               
594-935
               

               
Cow position:
               
chr23:41472474-41472821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 215
               

               
Conread position:
               
594-949
               

               
Cow position:
               
chr23:26849041-26848685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 51
               

               
Conread position:
               
595-875
               

               
Cow position:
               
chr23:1398177-1397900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
24, 75
               

               
Conread position:
               
595-950
               

               
Cow position:
               
chr23:1536185-1536530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
31, 79
               

               
Conread position:
               
595-955
               

               
Cow position:
               
chr23:20557990-20557627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
32, 120
               

               
Conread position:
               
596-936
               

               
Cow position:
               
chr23:10416565-10416231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
54, 96
               

               
Conread position:
               
596-937
               

               
Cow position:
               
chr23:20195055-20194732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
596-941
               

               
Cow position:
               
chr23:6223852-6224170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
596-941
               

               
Cow position:
               
chr23:10852911-10853249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 163
               

               
Conread position:
               
596-941
               

               
Cow position:
               
chr23:16881300-16880968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
596-945
               

               
Cow position:
               
chr23:6244721-6244395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
331, 27
               

               
Conread position:
               
597-951
               

               
Cow position:
               
chr23:1290159-1290518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
112, 27
               

               
Conread position:
               
597-958
               

               
Cow position:
               
chr23:5600415-5600775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
124, 96
               

               
Conread position:
               
598-882
               

               
Cow position:
               
chr23:30950824-30951104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
124, 25
               

               
Conread position:
               
598-949
               

               
Cow position:
               
chr23:18802409-18802057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
598-950
               

               
Cow position:
               
chr23:5437134-5436790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
601-924
               

               
Cow position:
               
chr23:468593-468279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
601-941
               

               
Cow position:
               
chr23:16744415-16744745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
118, 22
               

               
Conread position:
               
601-955
               

               
Cow position:
               
chr23:5732417-5732751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
121, 22
               

               
Conread position:
               
603-959
               

               
Cow position:
               
chr23:307326-307677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 43
               

               
Conread position:
               
604-879
               

               
Cow position:
               
chr23:28945194-28944926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
604-939
               

               
Cow position:
               
chr23:8923477-8923799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
126, 39
               

               
Conread position:
               
604-949
               

               
Cow position:
               
chr23:4499262-4498922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
119, 91
               

               
Conread position:
               
604-956
               

               
Cow position:
               
chr23:11081128-11081476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 39
               

               
Conread position:
               
605-945
               

               
Cow position:
               
chr23:9226145-9226480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 146
               

               
Conread position:
               
607-949
               

               
Cow position:
               
chr23:3890693-3890362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
607-956
               

               
Cow position:
               
chr23:36172395-36172749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
116, 31
               

               
Conread position:
               
608-939
               

               
Cow position:
               
chr23:5795352-5795676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
115, 15
               

               
Conread position:
               
608-951
               

               
Cow position:
               
chr23:37897790-37898129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
122, 35
               

               
Conread position:
               
610-766
               

               
Cow position:
               
chr23:4445844-4445688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
612-941
               

               
Cow position:
               
chr23:9805873-9805561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
64, 56
               

               
Conread position:
               
612-950
               

               
Cow position:
               
chr23:40789856-40790176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
131, 11
               

               
Conread position:
               
613-875
               

               
Cow position:
               
chr23:38208601-38208865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
11, 96
               

               
Conread position:
               
614-938
               

               
Cow position:
               
chr23:35149632-35149951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
615-939
               

               
Cow position:
               
chr23:16797929-16797611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
86, 254
               

               
Conread position:
               
618-807
               

               
Cow position:
               
chr23:9048483-9048295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 88
               

               
Conread position:
               
618-855
               

               
Cow position:
               
chr23:1876594-1876830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
103, 70
               

               
Conread position:
               
618-949
               

               
Cow position:
               
chr23:14394554-14394878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
83, 28
               

               
Conread position:
               
618-954
               

               
Cow position:
               
chr23:306408-306740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
87, 28
               

               
Conread position:
               
618-959
               

               
Cow position:
               
chr23:30827863-30827541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
619-911
               

               
Cow position:
               
chr23:1701055-1701346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
51, 56
               

               
Conread position:
               
620-937
               

               
Cow position:
               
chr23:283502-283204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
620-958
               

               
Cow position:
               
chr23:25883838-25884187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
77, 96
               

               
Conread position:
               
621-959
               

               
Cow position:
               
chr23:11212392-11212722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
102, 76
               

               
Conread position:
               
622-886
               

               
Cow position:
               
chr23:39275777-39276046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
622-949
               

               
Cow position:
               
chr23:27859682-27860001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
625-949
               

               
Cow position:
               
chr23:40330264-40329942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
237, 80
               

               
Conread position:
               
627-929
               

               
Cow position:
               
chr23:25363475-25363764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
207, 75
               

               
Conread position:
               
627-949
               

               
Cow position:
               
chr23:19173460-19173146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
217, 30
               

               
Conread position:
               
627-956
               

               
Cow position:
               
chr23:24685144-24685460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
110, 69
               

               
Conread position:
               
629-959
               

               
Cow position:
               
chr23:40348747-40348424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
41, 32
               

               
Conread position:
               
631-929
               

               
Cow position:
               
chr23:15280602-15280305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
99, 77
               

               
Conread position:
               
631-941
               

               
Cow position:
               
chr23:20539280-20539581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
80, 26
               

               
Conread position:
               
632-916
               

               
Cow position:
               
chr23:18036760-18036480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
90, 63
               

               
Conread position:
               
632-939
               

               
Cow position:
               
chr23:10497606-10497896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
136, 47
               

               
Conread position:
               
632-941
               

               
Cow position:
               
chr23:1222342-1222039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
90, 226
               

               
Conread position:
               
641-925
               

               
Cow position:
               
chr23:14651797-14651525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
55, 9
               

               
Conread position:
               
650-923
               

               
Cow position:
               
chr23:17486911-17486643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
73, 64
               

               
Conread position:
               
650-941
               

               
Cow position:
               
chr23:385397-385106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 67
               

               
Conread position:
               
650-949
               

               
Cow position:
               
chr23:3293607-3293899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
57, 189
               

               
Conread position:
               
650-949
               

               
Cow position:
               
chr23:32322958-32322660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 52
               

               
Conread position:
               
650-949
               

               
Cow position:
               
chr23:38264618-38264319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
124, 65
               

               
Conread position:
               
651-930
               

               
Cow position:
               
chr23:18238610-18238333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 46
               

               
Conread position:
               
651-937
               

               
Cow position:
               
chr23:16780633-16780358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
215, 55
               

               
Conread position:
               
651-958
               

               
Cow position:
               
chr23:14462429-14462729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
652-855
               

               
Cow position:
               
chr23:2799499-2799698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
652-875
               

               
Cow position:
               
chr23:21440084-21439862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
53, 61
               

               
Conread position:
               
652-960
               

               
Cow position:
               
chr23:14523901-14524219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
60, 54
               

               
Conread position:
               
653-943
               

               
Cow position:
               
chr23:40391395-40391679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
77, 24
               

               
Conread position:
               
656-944
               

               
Cow position:
               
chr23:11224779-11225059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
658-955
               

               
Cow position:
               
chr23:5881595-5881304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
289, 48
               

               
Conread position:
               
661-929
               

               
Cow position:
               
chr23:39811434-39811168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
69, 52
               

               
Conread position:
               
663-951
               

               
Cow position:
               
chr23:39302630-39302907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
88, 34
               

               
Conread position:
               
666-949
               

               
Cow position:
               
chr23:18384653-18384929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
666-955
               

               
Cow position:
               
chr23:35965074-35965365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
42, 188
               

               
Conread position:
               
670-949
               

               
Cow position:
               
chr23:24962930-24963212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 123
               

               
Conread position:
               
673-935
               

               
Cow position:
               
chr23:40637194-40637460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
33, 38
               

               
Conread position:
               
673-937
               

               
Cow position:
               
chr23:1981716-1981475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
673-941
               

               
Cow position:
               
chr23:24966526-24966259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
50, 36
               

               
Conread position:
               
673-941
               

               
Cow position:
               
chr23:32166958-32167233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
51, 29
               

               
Conread position:
               
673-949
               

               
Cow position:
               
chr23:19760850-19760575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
674-941
               

               
Cow position:
               
chr23:18822932-18823186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
675-941
               

               
Cow position:
               
chr23:35929885-35930150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
19, 179
               

               
Conread position:
               
680-936
               

               
Cow position:
               
chr23:4877302-4877568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
682-950
               

               
Cow position:
               
chr23:14140554-14140824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
682-950
               

               
Cow position:
               
chr23:40275597-40275346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
684-949
               

               
Cow position:
               
chr23:2470945-2471215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
686-929
               

               
Cow position:
               
chr23:2160684-2160452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
688-941
               

               
Cow position:
               
chr23:18692230-18691972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 179
               

               
Conread position:
               
690-959
               

               
Cow position:
               
chr23:4003595-4003868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
16, 258
               

               
Conread position:
               
691-930
               

               
Cow position:
               
chr23:20093287-20093053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
696-958
               

               
Cow position:
               
chr23:21539115-21539378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
697-960
               

               
Cow position:
               
chr23:28590337-28590074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 14
               

               
Conread position:
               
699-941
               

               
Cow position:
               
chr23:25990475-25990236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 89
               

               
Conread position:
               
703-959
               

               
Cow position:
               
chr23:8698385-8698647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
705-948
               

               
Cow position:
               
chr23:10377389-10377143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
14, 120
               

               
Conread position:
               
705-949
               

               
Cow position:
               
chr23:37041620-37041377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
708-941
               

               
Cow position:
               
chr23:1760875-1760631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
709-929
               

               
Cow position:
               
chr23:22586852-22587068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
711-950
               

               
Cow position:
               
chr23:13137962-13137728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 140
               

               
Conread position:
               
712-955
               

               
Cow position:
               
chr23:7709765-7709997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 130
               

               
Conread position:
               
713-947
               

               
Cow position:
               
chr23:39203092-39202864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
78, 62
               

               
Conread position:
               
714-956
               

               
Cow position:
               
chr23:3234805-3234559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
716-941
               

               
Cow position:
               
chr23:39267763-39267987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
8, 157
               

               
Conread position:
               
716-951
               

               
Cow position:
               
chr23:22238842-22238608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
156, 192
               

               
Conread position:
               
716-955
               

               
Cow position:
               
chr23:4844586-4844827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
80, 125
               

               
Conread position:
               
720-950
               

               
Cow position:
               
chr23:17597410-17597633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
721-950
               

               
Cow position:
               
chr23:1877911-1877683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
220, 129
               

               
Conread position:
               
724-941
               

               
Cow position:
               
chr23:1652989-1653207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 47
               

               
Conread position:
               
724-949
               

               
Cow position:
               
chr23:1194504-1194286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
725-929
               

               
Cow position:
               
chr23:33153773-33153976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
725-949
               

               
Cow position:
               
chr23:39333533-39333309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
725-949
               

               
Cow position:
               
chr23:39839408-39839632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
725-959
               

               
Cow position:
               
chr23:15655675-15655433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
726-956
               

               
Cow position:
               
chr23:18739475-18739239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
727-941
               

               
Cow position:
               
chr23:32173871-32173657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
729-929
               

               
Cow position:
               
chr23:24779550-24779350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
729-949
               

               
Cow position:
               
chr23:32621276-32621498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
729-959
               

               
Cow position:
               
chr23:40738026-40737792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
732-940
               

               
Cow position:
               
chr23:27848992-27849194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
738-949
               

               
Cow position:
               
chr23:35512262-35512047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 26
               

               
Conread position:
               
738-959
               

               
Cow position:
               
chr23:3204780-3205009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
740-941
               

               
Cow position:
               
chr23:7155689-7155499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
741-951
               

               
Cow position:
               
chr23:6179540-6179336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
745-949
               

               
Cow position:
               
chr23:18222048-18221844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
745-956
               

               
Cow position:
               
chr23:29330315-29330527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
747-941
               

               
Cow position:
               
chr23:36200415-36200601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
748-941
               

               
Cow position:
               
chr23:17012727-17012540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
748-949
               

               
Cow position:
               
chr23:7856771-7856972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 105
               

               
Conread position:
               
749-949
               

               
Cow position:
               
chr23:37456024-37455825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
750-958
               

               
Cow position:
               
chr23:20397452-20397244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
190, 17
               

               
Conread position:
               
751-941
               

               
Cow position:
               
chr23:24718787-24718601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
754-950
               

               
Cow position:
               
chr23:18611747-18611552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
757-941
               

               
Cow position:
               
chr23:4979261-4979081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
157, 37
               

               
Conread position:
               
757-941
               

               
Cow position:
               
chr23:40501077-40500894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
181, 80
               

               
Conread position:
               
757-959
               

               
Cow position:
               
chr23:38267380-38267187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
758-945
               

               
Cow position:
               
chr23:28814397-28814585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
758-945
               

               
Cow position:
               
chr23:33232680-33232495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
764-949
               

               
Cow position:
               
chr23:28580559-28580372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
771-937
               

               
Cow position:
               
chr23:5603711-5603549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
772-958
               

               
Cow position:
               
chr23:35527115-35527300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
773-941
               

               
Cow position:
               
chr23:9726505-9726337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
773-949
               

               
Cow position:
               
chr23:30617442-30617266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
773-951
               

               
Cow position:
               
chr23:17462626-17462804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 99
               

               
Conread position:
               
773-952
               

               
Cow position:
               
chr23:164796-164967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
75, 80
               

               
Conread position:
               
773-955
               

               
Cow position:
               
chr23:25087366-25087184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
37, 134
               

               
Conread position:
               
773-959
               

               
Cow position:
               
chr23:1739500-1739675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
774-935
               

               
Cow position:
               
chr23:1510889-1510732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
774-935
               

               
Cow position:
               
chr23:21423805-21423962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
774-937
               

               
Cow position:
               
chr23:1480677-1480840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
774-937
               

               
Cow position:
               
chr23:15056534-15056378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
774-938
               

               
Cow position:
               
chr23:29607114-29607273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
774-941
               

               
Cow position:
               
chr23:5215879-5215710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
49, 38
               

               
Conread position:
               
774-941
               

               
Cow position:
               
chr23:5395438-5395281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
774-945
               

               
Cow position:
               
chr23:3983154-3982974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 86
               

               
Conread position:
               
774-949
               

               
Cow position:
               
chr23:39056794-39056968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
47, 132
               

               
Conread position:
               
774-950
               

               
Cow position:
               
chr23:22530401-22530223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
165, 106
               

               
Conread position:
               
774-952
               

               
Cow position:
               
chr23:16664364-16664190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
774-957
               

               
Cow position:
               
chr23:35718349-35718528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
774-959
               

               
Cow position:
               
chr23:4416250-4416066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
775-930
               

               
Cow position:
               
chr23:4343520-4343675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
775-938
               

               
Cow position:
               
chr23:32126344-32126504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
775-939
               

               
Cow position:
               
chr23:26029188-26029358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
775-939
               

               
Cow position:
               
chr23:28529916-28529751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
775-941
               

               
Cow position:
               
chr23:2395559-2395396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
775-941
               

               
Cow position:
               
chr23:9387989-9387828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
775-941
               

               
Cow position:
               
chr23:13380748-13380911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
775-941
               

               
Cow position:
               
chr23:18822397-18822230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
775-941
               

               
Cow position:
               
chr23:23104449-23104288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
775-941
               

               
Cow position:
               
chr23:37948725-37948891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 104
               

               
Conread position:
               
775-946
               

               
Cow position:
               
chr23:37993210-37993383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
775-949
               

               
Cow position:
               
chr23:4802997-4803173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
119, 75
               

               
Conread position:
               
775-951
               

               
Cow position:
               
chr23:17792386-17792208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
162, 69
               

               
Conread position:
               
775-951
               

               
Cow position:
               
chr23:40965943-40965767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
775-958
               

               
Cow position:
               
chr23:19179336-19179150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
85, 134
               

               
Conread position:
               
775-959
               

               
Cow position:
               
chr23:1798149-1798339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
775-959
               

               
Cow position:
               
chr23:18387552-18387367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
775-960
               

               
Cow position:
               
chr23:4291393-4291581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
776-937
               

               
Cow position:
               
chr23:10675891-10676052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
780-940
               

               
Cow position:
               
chr23:10844599-10844760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
780-941
               

               
Cow position:
               
chr23:4521841-4521679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
780-941
               

               
Cow position:
               
chr23:5605302-5605467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
780-941
               

               
Cow position:
               
chr23:5612562-5612727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
780-945
               

               
Cow position:
               
chr23:13410712-13410555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
780-955
               

               
Cow position:
               
chr23:34264708-34264536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
781-941
               

               
Cow position:
               
chr23:35656452-35656611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
781-955
               

               
Cow position:
               
chr23:27526629-27526801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
782-947
               

               
Cow position:
               
chr23:18740172-18740007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
782-960
               

               
Cow position:
               
chr23:15099884-15099703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
783-951
               

               
Cow position:
               
chr23:809552-809719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
784-959
               

               
Cow position:
               
chr23:31262946-31263119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
787-959
               

               
Cow position:
               
chr23:3270349-3270522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
158, 118
               

               
Conread position:
               
790-951
               

               
Cow position:
               
chr23:30867246-30867087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
790-960
               

               
Cow position:
               
chr23:26975411-26975247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
791-944
               

               
Cow position:
               
chr23:13836774-13836928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
795-937
               

               
Cow position:
               
chr23:2511204-2511343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
797-958
               

               
Cow position:
               
chr23:40487906-40487745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 24
               

               
Conread position:
               
802-948
               

               
Cow position:
               
chr23:2563728-2563873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
802-948
               

               
Cow position:
               
chr23:27307811-27307957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.